ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQM:0882:0754

Extra

PDB:
ATOM 1 O3' A A 881 59.084 116.699 62.069 1.00 36.17 O
ATOM 2 P A A 882 60.445 116.827 62.909 1.00 35.13 P
ATOM 3 OP1 A A 882 60.052 116.911 64.320 1.00 36.78 O
ATOM 4 OP2 A A 882 61.309 117.882 62.316 1.00 41.31 O
ATOM 5 O5' A A 882 61.207 115.443 62.721 1.00 35.23 O
ATOM 6 C5' A A 882 61.740 115.047 61.448 1.00 32.52 C
ATOM 7 C4' A A 882 62.896 114.105 61.650 1.00 31.77 C
ATOM 8 O4' A A 882 64.026 114.832 62.188 1.00 32.88 O
ATOM 9 C3' A A 882 62.623 113.022 62.672 1.00 32.10 C
ATOM 10 O3' A A 882 61.936 111.937 62.069 1.00 34.43 O
ATOM 11 C2' A A 882 64.013 112.665 63.174 1.00 29.83 C
ATOM 12 O2' A A 882 64.697 111.759 62.338 1.00 29.33 O
ATOM 13 C1' A A 882 64.710 114.030 63.137 1.00 32.19 C
ATOM 14 N9 A A 882 64.726 114.750 64.416 1.00 32.05 N
ATOM 15 C8 A A 882 63.947 115.825 64.765 1.00 28.28 C
ATOM 16 N7 A A 882 64.180 116.273 65.967 1.00 30.34 N
ATOM 17 C5 A A 882 65.177 115.439 66.448 1.00 29.06 C
ATOM 18 C6 A A 882 65.849 115.397 67.674 1.00 30.50 C
ATOM 19 N6 A A 882 65.590 116.234 68.681 1.00 31.92 N
ATOM 20 N1 A A 882 66.800 114.454 67.841 1.00 29.99 N
ATOM 21 C2 A A 882 67.035 113.606 66.834 1.00 33.57 C
ATOM 22 N3 A A 882 66.454 113.540 65.633 1.00 32.65 N
ATOM 23 C4 A A 882 65.525 114.499 65.505 1.00 29.42 C
ATOM 24 P C A 883 60.656 111.290 62.798 1.00 32.48 P
ATOM 25 OP1 C A 883 60.060 110.395 61.794 1.00 32.47 O
ATOM 26 OP2 C A 883 59.819 112.340 63.414 1.00 30.35 O
ATOM 27 O5' C A 883 61.304 110.427 63.968 1.00 30.37 O
TER

ATOM 1 O3' A B 753 64.660 120.344 74.777 1.00 38.73 O
ATOM 2 P A B 754 65.159 121.875 74.864 1.00 38.31 P
ATOM 3 OP1 A B 754 64.692 122.464 76.154 1.00 36.62 O
ATOM 4 OP2 A B 754 64.878 122.589 73.597 1.00 40.64 O
ATOM 5 O5' A B 754 66.727 121.692 74.975 1.00 33.53 O
ATOM 6 C5' A B 754 67.476 121.192 73.872 1.00 34.63 C
ATOM 7 C4' A B 754 68.447 120.151 74.340 1.00 34.76 C
ATOM 8 O4' A B 754 67.775 118.865 74.445 1.00 37.84 O
ATOM 9 C3' A B 754 69.537 119.858 73.344 1.00 35.47 C
ATOM 10 O3' A B 754 70.533 120.858 73.385 1.00 37.87 O
ATOM 11 C2' A B 754 70.029 118.492 73.796 1.00 35.94 C
ATOM 12 O2' A B 754 70.910 118.516 74.890 1.00 36.31 O
ATOM 13 C1' A B 754 68.714 117.826 74.207 1.00 35.85 C
ATOM 14 N9 A B 754 68.221 116.966 73.134 1.00 37.66 N
ATOM 15 C8 A B 754 67.637 117.328 71.944 1.00 37.25 C
ATOM 16 N7 A B 754 67.395 116.317 71.148 1.00 40.61 N
ATOM 17 C5 A B 754 67.824 115.212 71.871 1.00 39.69 C
ATOM 18 C6 A B 754 67.846 113.840 71.576 1.00 41.19 C
ATOM 19 N6 A B 754 67.445 113.332 70.413 1.00 41.21 N
ATOM 20 N1 A B 754 68.315 112.999 72.526 1.00 41.61 N
ATOM 21 C2 A B 754 68.748 113.517 73.686 1.00 38.86 C
ATOM 22 N3 A B 754 68.794 114.786 74.072 1.00 38.56 N
ATOM 23 C4 A B 754 68.311 115.593 73.107 1.00 39.41 C
ATOM 24 P U B 755 71.340 121.209 72.054 1.00 38.83 P
ATOM 25 OP1 U B 755 72.524 121.979 72.483 1.00 42.02 O
ATOM 26 OP2 U B 755 70.415 121.782 71.047 1.00 37.43 O
ATOM 27 O5' U B 755 71.810 119.768 71.565 1.00 40.51 O
TER

Atoms:
OP1: (60.052,116.911,64.320)
OP2: (61.309,117.882,62.316)
C3': (62.623,113.022,62.672)
C1': (64.710,114.030,63.137)
C5': (61.740,115.047,61.448)
O4': (64.026,114.832,62.188)
C8: (63.947,115.825,64.765)
O2': (64.697,111.759,62.338)
C6: (65.849,115.397,67.674)
C5: (65.177,115.439,66.448)
C4: (65.525,114.499,65.505)
P: (60.445,116.827,62.909)
C4': (62.896,114.105,61.650)
C2': (64.013,112.665,63.174)
C2: (67.035,113.606,66.834)
N1: (66.800,114.454,67.841)
N3: (66.454,113.540,65.633)
N6: (65.590,116.234,68.681)
N7: (64.180,116.273,65.967)
N9: (64.726,114.750,64.416)
O5': (61.207,115.443,62.721)
O3': (61.936,111.937,62.069)
OP1: (64.692,122.464,76.154)
OP2: (64.878,122.589,73.597)
C3': (69.537,119.858,73.344)
C1': (68.714,117.826,74.207)
C5': (67.476,121.192,73.872)
O4': (67.775,118.865,74.445)
C8: (67.637,117.328,71.944)
O2': (70.910,118.516,74.890)
C6: (67.846,113.840,71.576)
C5: (67.824,115.212,71.871)
C4: (68.311,115.593,73.107)
P: (65.159,121.875,74.864)
C4': (68.447,120.151,74.340)
C2': (70.029,118.492,73.796)
C2: (68.748,113.517,73.686)
N1: (68.315,112.999,72.526)
N3: (68.794,114.786,74.072)
N6: (67.445,113.332,70.413)
N7: (67.395,116.317,71.148)
N9: (68.221,116.966,73.134)
O5': (66.727,121.692,74.975)
O3': (70.533,120.858,73.385)
Image (generated by PyMOL):
PyMOL image
show in jmol