Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R1D:D5:D4
Extra
PDB:
ATOM 1 O3' C A 4 6.855 7.060 30.890 1.00 26.22 O
ATOM 2 P G A 5 7.956 6.267 30.071 0.50 25.86 P
ATOM 3 OP1 G A 5 9.232 6.496 30.785 0.50 25.14 O
ATOM 4 OP2 G A 5 7.833 6.637 28.641 0.50 22.49 O
ATOM 5 O5' G A 5 7.551 4.735 30.273 0.50 23.91 O
ATOM 6 C5' G A 5 7.987 3.735 29.355 0.50 22.29 C
ATOM 7 C4' G A 5 7.725 2.369 29.954 0.50 20.74 C
ATOM 8 O4' G A 5 6.347 2.325 30.391 0.50 22.03 O
ATOM 9 C3' G A 5 7.859 1.182 29.010 0.50 21.71 C
ATOM 10 O3' G A 5 9.199 0.729 28.957 0.50 25.13 O
ATOM 11 C2' G A 5 6.959 0.173 29.700 0.50 21.13 C
ATOM 12 O2' G A 5 7.546 -0.348 30.876 0.50 22.24 O
ATOM 13 C1' G A 5 5.787 1.082 30.038 0.50 19.92 C
ATOM 14 N9 G A 5 4.898 1.218 28.888 0.50 19.57 N
ATOM 15 C8 G A 5 4.125 0.192 28.411 0.50 19.27 C
ATOM 16 N7 G A 5 3.406 0.511 27.379 0.50 15.34 N
ATOM 17 C5 G A 5 3.730 1.837 27.146 0.50 16.88 C
ATOM 18 C6 G A 5 3.250 2.694 26.138 0.50 18.02 C
ATOM 19 O6 G A 5 2.429 2.434 25.253 0.50 16.94 O
ATOM 20 N1 G A 5 3.809 3.959 26.230 0.50 16.93 N
ATOM 21 C2 G A 5 4.724 4.344 27.177 0.50 18.80 C
ATOM 22 N2 G A 5 5.135 5.615 27.085 0.50 19.74 N
ATOM 23 N3 G A 5 5.187 3.549 28.139 0.50 19.64 N
ATOM 24 C4 G A 5 4.654 2.303 28.060 0.50 15.52 C
ATOM 25 P G A 6 9.848 0.450 27.521 0.50 25.96 P
ATOM 26 OP1 G A 6 11.230 -0.032 27.718 0.50 26.12 O
ATOM 27 OP2 G A 6 9.573 1.613 26.650 0.50 27.43 O
ATOM 28 O5' G A 6 9.013 -0.790 26.971 0.50 23.69 O
TER
ATOM 1 O3' G B 3 2.617 11.223 30.157 1.00 16.13 O
ATOM 2 P C B 4 3.830 10.779 29.246 1.00 17.80 P
ATOM 3 OP1 C B 4 4.912 11.759 29.506 1.00 23.79 O
ATOM 4 OP2 C B 4 3.422 10.518 27.853 1.00 18.97 O
ATOM 5 O5' C B 4 4.225 9.357 29.883 1.00 20.32 O
ATOM 6 C5' C B 4 4.693 9.248 31.221 1.00 19.54 C
ATOM 7 C4' C B 4 4.706 7.794 31.655 1.00 19.13 C
ATOM 8 O4' C B 4 3.355 7.265 31.707 1.00 19.00 O
ATOM 9 C3' C B 4 5.449 6.869 30.714 1.00 22.47 C
ATOM 10 O3' C B 4 6.855 7.060 30.890 1.00 26.22 O
ATOM 11 C2' C B 4 4.922 5.548 31.239 1.00 23.15 C
ATOM 12 O2' C B 4 5.432 5.229 32.523 1.00 22.69 O
ATOM 13 C1' C B 4 3.445 5.890 31.363 1.00 17.52 C
ATOM 14 N1 C B 4 2.690 5.699 30.113 1.00 15.12 N
ATOM 15 C2 C B 4 2.200 4.418 29.877 1.00 17.42 C
ATOM 16 O2 C B 4 2.429 3.518 30.705 1.00 16.76 O
ATOM 17 N3 C B 4 1.487 4.206 28.764 1.00 15.56 N
ATOM 18 C4 C B 4 1.266 5.209 27.903 1.00 14.20 C
ATOM 19 N4 C B 4 0.558 4.927 26.812 1.00 13.60 N
ATOM 20 C5 C B 4 1.757 6.525 28.121 1.00 15.51 C
ATOM 21 C6 C B 4 2.468 6.725 29.241 1.00 16.25 C
ATOM 22 P G B 5 7.956 6.267 30.071 0.50 25.86 P
ATOM 23 OP1 G B 5 9.232 6.496 30.785 0.50 25.14 O
ATOM 24 OP2 G B 5 7.833 6.637 28.641 0.50 22.49 O
ATOM 25 O5' G B 5 7.551 4.735 30.273 0.50 23.91 O
TER
ATOM 2 P G A 5 7.956 6.267 30.071 0.50 25.86 P
ATOM 3 OP1 G A 5 9.232 6.496 30.785 0.50 25.14 O
ATOM 4 OP2 G A 5 7.833 6.637 28.641 0.50 22.49 O
ATOM 5 O5' G A 5 7.551 4.735 30.273 0.50 23.91 O
ATOM 6 C5' G A 5 7.987 3.735 29.355 0.50 22.29 C
ATOM 7 C4' G A 5 7.725 2.369 29.954 0.50 20.74 C
ATOM 8 O4' G A 5 6.347 2.325 30.391 0.50 22.03 O
ATOM 9 C3' G A 5 7.859 1.182 29.010 0.50 21.71 C
ATOM 10 O3' G A 5 9.199 0.729 28.957 0.50 25.13 O
ATOM 11 C2' G A 5 6.959 0.173 29.700 0.50 21.13 C
ATOM 12 O2' G A 5 7.546 -0.348 30.876 0.50 22.24 O
ATOM 13 C1' G A 5 5.787 1.082 30.038 0.50 19.92 C
ATOM 14 N9 G A 5 4.898 1.218 28.888 0.50 19.57 N
ATOM 15 C8 G A 5 4.125 0.192 28.411 0.50 19.27 C
ATOM 16 N7 G A 5 3.406 0.511 27.379 0.50 15.34 N
ATOM 17 C5 G A 5 3.730 1.837 27.146 0.50 16.88 C
ATOM 18 C6 G A 5 3.250 2.694 26.138 0.50 18.02 C
ATOM 19 O6 G A 5 2.429 2.434 25.253 0.50 16.94 O
ATOM 20 N1 G A 5 3.809 3.959 26.230 0.50 16.93 N
ATOM 21 C2 G A 5 4.724 4.344 27.177 0.50 18.80 C
ATOM 22 N2 G A 5 5.135 5.615 27.085 0.50 19.74 N
ATOM 23 N3 G A 5 5.187 3.549 28.139 0.50 19.64 N
ATOM 24 C4 G A 5 4.654 2.303 28.060 0.50 15.52 C
ATOM 25 P G A 6 9.848 0.450 27.521 0.50 25.96 P
ATOM 26 OP1 G A 6 11.230 -0.032 27.718 0.50 26.12 O
ATOM 27 OP2 G A 6 9.573 1.613 26.650 0.50 27.43 O
ATOM 28 O5' G A 6 9.013 -0.790 26.971 0.50 23.69 O
TER
ATOM 1 O3' G B 3 2.617 11.223 30.157 1.00 16.13 O
ATOM 2 P C B 4 3.830 10.779 29.246 1.00 17.80 P
ATOM 3 OP1 C B 4 4.912 11.759 29.506 1.00 23.79 O
ATOM 4 OP2 C B 4 3.422 10.518 27.853 1.00 18.97 O
ATOM 5 O5' C B 4 4.225 9.357 29.883 1.00 20.32 O
ATOM 6 C5' C B 4 4.693 9.248 31.221 1.00 19.54 C
ATOM 7 C4' C B 4 4.706 7.794 31.655 1.00 19.13 C
ATOM 8 O4' C B 4 3.355 7.265 31.707 1.00 19.00 O
ATOM 9 C3' C B 4 5.449 6.869 30.714 1.00 22.47 C
ATOM 10 O3' C B 4 6.855 7.060 30.890 1.00 26.22 O
ATOM 11 C2' C B 4 4.922 5.548 31.239 1.00 23.15 C
ATOM 12 O2' C B 4 5.432 5.229 32.523 1.00 22.69 O
ATOM 13 C1' C B 4 3.445 5.890 31.363 1.00 17.52 C
ATOM 14 N1 C B 4 2.690 5.699 30.113 1.00 15.12 N
ATOM 15 C2 C B 4 2.200 4.418 29.877 1.00 17.42 C
ATOM 16 O2 C B 4 2.429 3.518 30.705 1.00 16.76 O
ATOM 17 N3 C B 4 1.487 4.206 28.764 1.00 15.56 N
ATOM 18 C4 C B 4 1.266 5.209 27.903 1.00 14.20 C
ATOM 19 N4 C B 4 0.558 4.927 26.812 1.00 13.60 N
ATOM 20 C5 C B 4 1.757 6.525 28.121 1.00 15.51 C
ATOM 21 C6 C B 4 2.468 6.725 29.241 1.00 16.25 C
ATOM 22 P G B 5 7.956 6.267 30.071 0.50 25.86 P
ATOM 23 OP1 G B 5 9.232 6.496 30.785 0.50 25.14 O
ATOM 24 OP2 G B 5 7.833 6.637 28.641 0.50 22.49 O
ATOM 25 O5' G B 5 7.551 4.735 30.273 0.50 23.91 O
TER
Atoms:
OP1: (9.232,6.496,30.785)
OP2: (7.833,6.637,28.641)
C3': (7.859,1.182,29.010)
C1': (5.787,1.082,30.038)
C5': (7.987,3.735,29.355)
O6: (2.429,2.434,25.253)
O4': (6.347,2.325,30.391)
C8: (4.125,0.192,28.411)
C2: (4.724,4.344,27.177)
C6: (3.250,2.694,26.138)
C5: (3.730,1.837,27.146)
C4: (4.654,2.303,28.060)
P: (7.956,6.267,30.071)
C4': (7.725,2.369,29.954)
C2': (6.959,0.173,29.700)
O2': (7.546,-0.348,30.876)
N1: (3.809,3.959,26.230)
N2: (5.135,5.615,27.085)
N3: (5.187,3.549,28.139)
N7: (3.406,0.511,27.379)
N9: (4.898,1.218,28.888)
O5': (7.551,4.735,30.273)
O3': (9.199,0.729,28.957)
OP2: (7.833,6.637,28.641)
C3': (7.859,1.182,29.010)
C1': (5.787,1.082,30.038)
C5': (7.987,3.735,29.355)
O6: (2.429,2.434,25.253)
O4': (6.347,2.325,30.391)
C8: (4.125,0.192,28.411)
C2: (4.724,4.344,27.177)
C6: (3.250,2.694,26.138)
C5: (3.730,1.837,27.146)
C4: (4.654,2.303,28.060)
P: (7.956,6.267,30.071)
C4': (7.725,2.369,29.954)
C2': (6.959,0.173,29.700)
O2': (7.546,-0.348,30.876)
N1: (3.809,3.959,26.230)
N2: (5.135,5.615,27.085)
N3: (5.187,3.549,28.139)
N7: (3.406,0.511,27.379)
N9: (4.898,1.218,28.888)
O5': (7.551,4.735,30.273)
O3': (9.199,0.729,28.957)
C2: (2.200,4.418,29.877)
OP1: (4.912,11.759,29.506)
OP2: (3.422,10.518,27.853)
C4: (1.266,5.209,27.903)
O5': (4.225,9.357,29.883)
C3': (5.449,6.869,30.714)
C1': (3.445,5.890,31.363)
O4': (3.355,7.265,31.707)
C5': (4.693,9.248,31.221)
P: (3.830,10.779,29.246)
O2: (2.429,3.518,30.705)
C4': (4.706,7.794,31.655)
C2': (4.922,5.548,31.239)
O2': (5.432,5.229,32.523)
N1: (2.690,5.699,30.113)
N3: (1.487,4.206,28.764)
N4: (0.558,4.927,26.812)
C6: (2.468,6.725,29.241)
C5: (1.757,6.525,28.121)
O3': (6.855,7.060,30.890)
OP1: (4.912,11.759,29.506)
OP2: (3.422,10.518,27.853)
C4: (1.266,5.209,27.903)
O5': (4.225,9.357,29.883)
C3': (5.449,6.869,30.714)
C1': (3.445,5.890,31.363)
O4': (3.355,7.265,31.707)
C5': (4.693,9.248,31.221)
P: (3.830,10.779,29.246)
O2: (2.429,3.518,30.705)
C4': (4.706,7.794,31.655)
C2': (4.922,5.548,31.239)
O2': (5.432,5.229,32.523)
N1: (2.690,5.699,30.113)
N3: (1.487,4.206,28.764)
N4: (0.558,4.927,26.812)
C6: (2.468,6.725,29.241)
C5: (1.757,6.525,28.121)
O3': (6.855,7.060,30.890)
Image (generated by PyMOL):