ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3D0X:A46:A38

Extra

PDB:
ATOM 1 O3' G A 45 -15.214 48.572 -21.937 1.00 74.39 O
ATOM 2 P A A 46 -16.224 47.618 -22.724 1.00 77.51 P
ATOM 3 OP1 A A 46 -16.986 48.450 -23.683 1.00 77.52 O
ATOM 4 OP2 A A 46 -16.943 46.770 -21.744 1.00 62.78 O
ATOM 5 O5' A A 46 -15.206 46.716 -23.556 1.00 56.30 O
ATOM 6 C5' A A 46 -15.708 45.630 -24.292 1.00 59.20 C
ATOM 7 C4' A A 46 -14.584 44.684 -24.648 1.00 60.65 C
ATOM 8 O4' A A 46 -13.599 44.659 -23.588 1.00 61.43 O
ATOM 9 C3' A A 46 -15.058 43.253 -24.789 1.00 62.46 C
ATOM 10 O3' A A 46 -15.463 43.060 -26.124 1.00 63.60 O
ATOM 11 C2' A A 46 -13.811 42.460 -24.431 1.00 60.26 C
ATOM 12 O2' A A 46 -12.916 42.376 -25.519 1.00 66.10 O
ATOM 13 C1' A A 46 -13.222 43.322 -23.317 1.00 62.61 C
ATOM 14 N9 A A 46 -13.699 42.983 -21.977 1.00 63.21 N
ATOM 15 C8 A A 46 -14.314 43.819 -21.086 1.00 63.44 C
ATOM 16 N7 A A 46 -14.638 43.245 -19.951 1.00 60.99 N
ATOM 17 C5 A A 46 -14.204 41.939 -20.107 1.00 58.32 C
ATOM 18 C6 A A 46 -14.253 40.818 -19.258 1.00 56.17 C
ATOM 19 N6 A A 46 -14.785 40.846 -18.033 1.00 58.11 N
ATOM 20 N1 A A 46 -13.733 39.663 -19.716 1.00 55.50 N
ATOM 21 C2 A A 46 -13.202 39.639 -20.943 1.00 58.33 C
ATOM 22 N3 A A 46 -13.098 40.624 -21.834 1.00 59.53 N
ATOM 23 C4 A A 46 -13.624 41.759 -21.349 1.00 61.41 C
ATOM 24 P A A 47 -17.015 42.797 -26.389 1.00 76.84 P
ATOM 25 OP1 A A 47 -17.276 43.008 -27.831 1.00 75.35 O
ATOM 26 OP2 A A 47 -17.800 43.537 -25.371 1.00 59.10 O
ATOM 27 O5' A A 47 -17.101 41.229 -26.095 1.00 66.30 O
TER

ATOM 1 O3' C B 37 -18.834 39.785 -10.818 1.00 60.26 O
ATOM 2 P A B 38 -17.398 40.403 -11.144 1.00 59.67 P
ATOM 3 OP1 A B 38 -16.825 40.913 -9.877 1.00 54.40 O
ATOM 4 OP2 A B 38 -17.528 41.303 -12.314 1.00 50.58 O
ATOM 5 O5' A B 38 -16.592 39.109 -11.622 1.00 57.69 O
ATOM 6 C5' A B 38 -16.357 38.040 -10.721 1.00 55.02 C
ATOM 7 C4' A B 38 -14.994 37.446 -11.014 1.00 53.36 C
ATOM 8 O4' A B 38 -14.937 37.060 -12.409 1.00 47.41 O
ATOM 9 C3' A B 38 -13.821 38.399 -10.787 1.00 49.90 C
ATOM 10 O3' A B 38 -12.848 37.783 -9.964 1.00 53.59 O
ATOM 11 C2' A B 38 -13.254 38.631 -12.181 1.00 50.07 C
ATOM 12 O2' A B 38 -11.847 38.764 -12.172 1.00 56.97 O
ATOM 13 C1' A B 38 -13.635 37.331 -12.867 1.00 48.36 C
ATOM 14 N9 A B 38 -13.647 37.443 -14.316 1.00 48.86 N
ATOM 15 C8 A B 38 -14.376 38.319 -15.068 1.00 51.46 C
ATOM 16 N7 A B 38 -14.178 38.194 -16.359 1.00 52.82 N
ATOM 17 C5 A B 38 -13.257 37.167 -16.454 1.00 48.99 C
ATOM 18 C6 A B 38 -12.638 36.554 -17.555 1.00 50.23 C
ATOM 19 N6 A B 38 -12.874 36.914 -18.819 1.00 51.58 N
ATOM 20 N1 A B 38 -11.766 35.557 -17.306 1.00 51.17 N
ATOM 21 C2 A B 38 -11.538 35.205 -16.036 1.00 53.38 C
ATOM 22 N3 A B 38 -12.059 35.707 -14.919 1.00 50.98 N
ATOM 23 C4 A B 38 -12.919 36.693 -15.204 1.00 47.69 C
ATOM 24 P G B 39 -13.159 37.446 -8.433 1.00 55.28 P
ATOM 25 OP1 G B 39 -13.668 36.057 -8.371 1.00 48.33 O
ATOM 26 OP2 G B 39 -13.946 38.560 -7.858 1.00 52.95 O
ATOM 27 O5' G B 39 -11.696 37.464 -7.789 1.00 60.65 O
TER

Atoms:
OP1: (-16.986,48.450,-23.683)
OP2: (-16.943,46.770,-21.744)
C3': (-15.058,43.253,-24.789)
C1': (-13.222,43.322,-23.317)
C5': (-15.708,45.630,-24.292)
O4': (-13.599,44.659,-23.588)
C8: (-14.314,43.819,-21.086)
O2': (-12.916,42.376,-25.519)
C6: (-14.253,40.818,-19.258)
C5: (-14.204,41.939,-20.107)
C4: (-13.624,41.759,-21.349)
P: (-16.224,47.618,-22.724)
C4': (-14.584,44.684,-24.648)
C2': (-13.811,42.460,-24.431)
C2: (-13.202,39.639,-20.943)
N1: (-13.733,39.663,-19.716)
N3: (-13.098,40.624,-21.834)
N6: (-14.785,40.846,-18.033)
N7: (-14.638,43.245,-19.951)
N9: (-13.699,42.983,-21.977)
O5': (-15.206,46.716,-23.556)
O3': (-15.463,43.060,-26.124)
OP1: (-16.825,40.913,-9.877)
OP2: (-17.528,41.303,-12.314)
C3': (-13.821,38.399,-10.787)
C1': (-13.635,37.331,-12.867)
C5': (-16.357,38.040,-10.721)
O4': (-14.937,37.060,-12.409)
C8: (-14.376,38.319,-15.068)
O2': (-11.847,38.764,-12.172)
C6: (-12.638,36.554,-17.555)
C5: (-13.257,37.167,-16.454)
C4: (-12.919,36.693,-15.204)
P: (-17.398,40.403,-11.144)
C4': (-14.994,37.446,-11.014)
C2': (-13.254,38.631,-12.181)
C2: (-11.538,35.205,-16.036)
N1: (-11.766,35.557,-17.306)
N3: (-12.059,35.707,-14.919)
N6: (-12.874,36.914,-18.819)
N7: (-14.178,38.194,-16.359)
N9: (-13.647,37.443,-14.316)
O5': (-16.592,39.109,-11.622)
O3': (-12.848,37.783,-9.964)
Image (generated by PyMOL):
PyMOL image
show in jmol