Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1036:A1039
Extra
PDB:
ATOM 1 O3' G A1035 26.511 104.093 112.583 1.00 38.16 O
ATOM 2 P G A1036 27.426 105.305 113.085 1.00 38.66 P
ATOM 3 OP1 G A1036 27.000 105.611 114.461 1.00 41.20 O
ATOM 4 OP2 G A1036 27.439 106.385 112.069 1.00 38.77 O
ATOM 5 O5' G A1036 28.888 104.696 113.136 1.00 37.56 O
ATOM 6 C5' G A1036 29.257 103.705 114.074 1.00 37.52 C
ATOM 7 C4' G A1036 30.676 103.300 113.822 1.00 38.35 C
ATOM 8 O4' G A1036 30.807 102.827 112.455 1.00 37.45 O
ATOM 9 C3' G A1036 31.708 104.406 113.870 1.00 38.04 C
ATOM 10 O3' G A1036 31.998 104.801 115.208 1.00 39.66 O
ATOM 11 C2' G A1036 32.876 103.743 113.149 1.00 38.97 C
ATOM 12 O2' G A1036 33.552 102.814 113.972 1.00 39.17 O
ATOM 13 C1' G A1036 32.153 102.973 112.038 1.00 38.12 C
ATOM 14 N9 G A1036 32.187 103.662 110.749 1.00 38.68 N
ATOM 15 C8 G A1036 31.260 104.549 110.259 1.00 38.66 C
ATOM 16 N7 G A1036 31.558 105.004 109.074 1.00 37.92 N
ATOM 17 C5 G A1036 32.757 104.382 108.761 1.00 38.05 C
ATOM 18 C6 G A1036 33.558 104.484 107.608 1.00 38.34 C
ATOM 19 O6 G A1036 33.362 105.160 106.604 1.00 41.70 O
ATOM 20 N1 G A1036 34.689 103.687 107.698 1.00 38.50 N
ATOM 21 C2 G A1036 35.005 102.894 108.766 1.00 38.97 C
ATOM 22 N2 G A1036 36.140 102.192 108.661 1.00 38.68 N
ATOM 23 N3 G A1036 34.265 102.792 109.855 1.00 38.60 N
ATOM 24 C4 G A1036 33.162 103.555 109.784 1.00 38.32 C
ATOM 25 P A A1037 32.799 106.168 115.491 1.00 39.40 P
ATOM 26 OP1 A A1037 34.228 105.860 115.267 1.00 38.58 O
ATOM 27 OP2 A A1037 32.350 106.675 116.817 1.00 37.59 O
ATOM 28 O5' A A1037 32.334 107.173 114.342 1.00 40.64 O
TER
ATOM 1 O3' A B1038 34.811 111.282 106.739 1.00 41.22 O
ATOM 2 P C B1039 34.509 110.185 105.608 1.00 42.20 P
ATOM 3 OP1 C B1039 34.441 110.985 104.355 1.00 41.72 O
ATOM 4 OP2 C B1039 33.380 109.297 105.979 1.00 42.07 O
ATOM 5 O5' C B1039 35.824 109.300 105.563 1.00 44.31 O
ATOM 6 C5' C B1039 36.912 109.616 104.685 1.00 45.13 C
ATOM 7 C4' C B1039 38.001 108.612 104.881 1.00 48.45 C
ATOM 8 O4' C B1039 38.411 108.676 106.279 1.00 50.61 O
ATOM 9 C3' C B1039 37.532 107.170 104.737 1.00 50.68 C
ATOM 10 O3' C B1039 37.424 106.612 103.415 1.00 52.20 O
ATOM 11 C2' C B1039 38.598 106.445 105.543 1.00 52.19 C
ATOM 12 O2' C B1039 39.843 106.421 104.858 1.00 52.03 O
ATOM 13 C1' C B1039 38.718 107.366 106.758 1.00 51.88 C
ATOM 14 N1 C B1039 37.761 106.992 107.840 1.00 52.23 N
ATOM 15 C2 C B1039 38.224 106.248 108.945 1.00 52.65 C
ATOM 16 O2 C B1039 39.435 105.954 109.022 1.00 55.95 O
ATOM 17 N3 C B1039 37.340 105.869 109.900 1.00 50.59 N
ATOM 18 C4 C B1039 36.053 106.212 109.802 1.00 49.59 C
ATOM 19 N4 C B1039 35.228 105.814 110.773 1.00 48.54 N
ATOM 20 C5 C B1039 35.560 106.978 108.710 1.00 49.99 C
ATOM 21 C6 C B1039 36.438 107.343 107.761 1.00 50.72 C
ATOM 22 P A B1040 38.184 107.283 102.167 1.00 54.06 P
ATOM 23 OP1 A B1040 39.399 107.971 102.670 1.00 53.49 O
ATOM 24 OP2 A B1040 37.197 108.032 101.337 1.00 54.86 O
ATOM 25 O5' A B1040 38.658 106.025 101.315 1.00 49.77 O
TER
ATOM 2 P G A1036 27.426 105.305 113.085 1.00 38.66 P
ATOM 3 OP1 G A1036 27.000 105.611 114.461 1.00 41.20 O
ATOM 4 OP2 G A1036 27.439 106.385 112.069 1.00 38.77 O
ATOM 5 O5' G A1036 28.888 104.696 113.136 1.00 37.56 O
ATOM 6 C5' G A1036 29.257 103.705 114.074 1.00 37.52 C
ATOM 7 C4' G A1036 30.676 103.300 113.822 1.00 38.35 C
ATOM 8 O4' G A1036 30.807 102.827 112.455 1.00 37.45 O
ATOM 9 C3' G A1036 31.708 104.406 113.870 1.00 38.04 C
ATOM 10 O3' G A1036 31.998 104.801 115.208 1.00 39.66 O
ATOM 11 C2' G A1036 32.876 103.743 113.149 1.00 38.97 C
ATOM 12 O2' G A1036 33.552 102.814 113.972 1.00 39.17 O
ATOM 13 C1' G A1036 32.153 102.973 112.038 1.00 38.12 C
ATOM 14 N9 G A1036 32.187 103.662 110.749 1.00 38.68 N
ATOM 15 C8 G A1036 31.260 104.549 110.259 1.00 38.66 C
ATOM 16 N7 G A1036 31.558 105.004 109.074 1.00 37.92 N
ATOM 17 C5 G A1036 32.757 104.382 108.761 1.00 38.05 C
ATOM 18 C6 G A1036 33.558 104.484 107.608 1.00 38.34 C
ATOM 19 O6 G A1036 33.362 105.160 106.604 1.00 41.70 O
ATOM 20 N1 G A1036 34.689 103.687 107.698 1.00 38.50 N
ATOM 21 C2 G A1036 35.005 102.894 108.766 1.00 38.97 C
ATOM 22 N2 G A1036 36.140 102.192 108.661 1.00 38.68 N
ATOM 23 N3 G A1036 34.265 102.792 109.855 1.00 38.60 N
ATOM 24 C4 G A1036 33.162 103.555 109.784 1.00 38.32 C
ATOM 25 P A A1037 32.799 106.168 115.491 1.00 39.40 P
ATOM 26 OP1 A A1037 34.228 105.860 115.267 1.00 38.58 O
ATOM 27 OP2 A A1037 32.350 106.675 116.817 1.00 37.59 O
ATOM 28 O5' A A1037 32.334 107.173 114.342 1.00 40.64 O
TER
ATOM 1 O3' A B1038 34.811 111.282 106.739 1.00 41.22 O
ATOM 2 P C B1039 34.509 110.185 105.608 1.00 42.20 P
ATOM 3 OP1 C B1039 34.441 110.985 104.355 1.00 41.72 O
ATOM 4 OP2 C B1039 33.380 109.297 105.979 1.00 42.07 O
ATOM 5 O5' C B1039 35.824 109.300 105.563 1.00 44.31 O
ATOM 6 C5' C B1039 36.912 109.616 104.685 1.00 45.13 C
ATOM 7 C4' C B1039 38.001 108.612 104.881 1.00 48.45 C
ATOM 8 O4' C B1039 38.411 108.676 106.279 1.00 50.61 O
ATOM 9 C3' C B1039 37.532 107.170 104.737 1.00 50.68 C
ATOM 10 O3' C B1039 37.424 106.612 103.415 1.00 52.20 O
ATOM 11 C2' C B1039 38.598 106.445 105.543 1.00 52.19 C
ATOM 12 O2' C B1039 39.843 106.421 104.858 1.00 52.03 O
ATOM 13 C1' C B1039 38.718 107.366 106.758 1.00 51.88 C
ATOM 14 N1 C B1039 37.761 106.992 107.840 1.00 52.23 N
ATOM 15 C2 C B1039 38.224 106.248 108.945 1.00 52.65 C
ATOM 16 O2 C B1039 39.435 105.954 109.022 1.00 55.95 O
ATOM 17 N3 C B1039 37.340 105.869 109.900 1.00 50.59 N
ATOM 18 C4 C B1039 36.053 106.212 109.802 1.00 49.59 C
ATOM 19 N4 C B1039 35.228 105.814 110.773 1.00 48.54 N
ATOM 20 C5 C B1039 35.560 106.978 108.710 1.00 49.99 C
ATOM 21 C6 C B1039 36.438 107.343 107.761 1.00 50.72 C
ATOM 22 P A B1040 38.184 107.283 102.167 1.00 54.06 P
ATOM 23 OP1 A B1040 39.399 107.971 102.670 1.00 53.49 O
ATOM 24 OP2 A B1040 37.197 108.032 101.337 1.00 54.86 O
ATOM 25 O5' A B1040 38.658 106.025 101.315 1.00 49.77 O
TER
Atoms:
OP1: (27.000,105.611,114.461)
OP2: (27.439,106.385,112.069)
C3': (31.708,104.406,113.870)
C1': (32.153,102.973,112.038)
C5': (29.257,103.705,114.074)
O6: (33.362,105.160,106.604)
O4': (30.807,102.827,112.455)
C8: (31.260,104.549,110.259)
C2: (35.005,102.894,108.766)
C6: (33.558,104.484,107.608)
C5: (32.757,104.382,108.761)
C4: (33.162,103.555,109.784)
P: (27.426,105.305,113.085)
C4': (30.676,103.300,113.822)
C2': (32.876,103.743,113.149)
O2': (33.552,102.814,113.972)
N1: (34.689,103.687,107.698)
N2: (36.140,102.192,108.661)
N3: (34.265,102.792,109.855)
N7: (31.558,105.004,109.074)
N9: (32.187,103.662,110.749)
O5': (28.888,104.696,113.136)
O3': (31.998,104.801,115.208)
OP2: (27.439,106.385,112.069)
C3': (31.708,104.406,113.870)
C1': (32.153,102.973,112.038)
C5': (29.257,103.705,114.074)
O6: (33.362,105.160,106.604)
O4': (30.807,102.827,112.455)
C8: (31.260,104.549,110.259)
C2: (35.005,102.894,108.766)
C6: (33.558,104.484,107.608)
C5: (32.757,104.382,108.761)
C4: (33.162,103.555,109.784)
P: (27.426,105.305,113.085)
C4': (30.676,103.300,113.822)
C2': (32.876,103.743,113.149)
O2': (33.552,102.814,113.972)
N1: (34.689,103.687,107.698)
N2: (36.140,102.192,108.661)
N3: (34.265,102.792,109.855)
N7: (31.558,105.004,109.074)
N9: (32.187,103.662,110.749)
O5': (28.888,104.696,113.136)
O3': (31.998,104.801,115.208)
C2: (38.224,106.248,108.945)
OP1: (34.441,110.985,104.355)
OP2: (33.380,109.297,105.979)
C4: (36.053,106.212,109.802)
O5': (35.824,109.300,105.563)
C3': (37.532,107.170,104.737)
C1': (38.718,107.366,106.758)
O4': (38.411,108.676,106.279)
C5': (36.912,109.616,104.685)
P: (34.509,110.185,105.608)
O2: (39.435,105.954,109.022)
C4': (38.001,108.612,104.881)
C2': (38.598,106.445,105.543)
O2': (39.843,106.421,104.858)
N1: (37.761,106.992,107.840)
N3: (37.340,105.869,109.900)
N4: (35.228,105.814,110.773)
C6: (36.438,107.343,107.761)
C5: (35.560,106.978,108.710)
O3': (37.424,106.612,103.415)
OP1: (34.441,110.985,104.355)
OP2: (33.380,109.297,105.979)
C4: (36.053,106.212,109.802)
O5': (35.824,109.300,105.563)
C3': (37.532,107.170,104.737)
C1': (38.718,107.366,106.758)
O4': (38.411,108.676,106.279)
C5': (36.912,109.616,104.685)
P: (34.509,110.185,105.608)
O2: (39.435,105.954,109.022)
C4': (38.001,108.612,104.881)
C2': (38.598,106.445,105.543)
O2': (39.843,106.421,104.858)
N1: (37.761,106.992,107.840)
N3: (37.340,105.869,109.900)
N4: (35.228,105.814,110.773)
C6: (36.438,107.343,107.761)
C5: (35.560,106.978,108.710)
O3': (37.424,106.612,103.415)
Image (generated by PyMOL):