Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R1C:U5:U4
Extra
PDB:
ATOM 1 O3' C A 4 28.892 -5.302 50.400 1.00 22.77 O
ATOM 2 P G A 5 28.245 -3.990 49.758 1.00 26.33 P
ATOM 3 OP1 G A 5 26.810 -3.924 50.137 1.00 27.37 O
ATOM 4 OP2 G A 5 28.614 -3.967 48.323 1.00 23.86 O
ATOM 5 O5' G A 5 29.050 -2.846 50.533 1.00 20.43 O
ATOM 6 C5' G A 5 29.092 -1.540 49.988 1.00 23.33 C
ATOM 7 C4' G A 5 29.912 -0.641 50.881 1.00 24.50 C
ATOM 8 O4' G A 5 31.177 -1.293 51.147 1.00 21.60 O
ATOM 9 C3' G A 5 30.298 0.697 50.269 1.00 21.21 C
ATOM 10 O3' G A 5 29.239 1.619 50.410 1.00 26.02 O
ATOM 11 C2' G A 5 31.463 1.044 51.176 1.00 26.61 C
ATOM 12 O2' G A 5 31.025 1.414 52.468 1.00 29.05 O
ATOM 13 C1' G A 5 32.179 -0.303 51.213 1.00 21.72 C
ATOM 14 N9 G A 5 33.069 -0.397 50.069 1.00 27.27 N
ATOM 15 C8 G A 5 34.239 0.315 49.933 1.00 26.34 C
ATOM 16 N7 G A 5 34.858 0.082 48.812 1.00 26.71 N
ATOM 17 C5 G A 5 34.053 -0.845 48.168 1.00 25.39 C
ATOM 18 C6 G A 5 34.242 -1.454 46.911 1.00 22.57 C
ATOM 19 O6 G A 5 35.183 -1.263 46.128 1.00 23.99 O
ATOM 20 N1 G A 5 33.205 -2.334 46.603 1.00 21.33 N
ATOM 21 C2 G A 5 32.124 -2.580 47.422 1.00 20.84 C
ATOM 22 N2 G A 5 31.219 -3.456 46.971 1.00 22.67 N
ATOM 23 N3 G A 5 31.936 -2.007 48.609 1.00 23.48 N
ATOM 24 C4 G A 5 32.939 -1.149 48.919 1.00 21.20 C
ATOM 25 P G A 6 28.942 2.690 49.255 1.00 25.67 P
ATOM 26 OP1 G A 6 27.764 3.480 49.672 1.00 25.48 O
ATOM 27 OP2 G A 6 28.940 1.997 47.947 1.00 20.65 O
ATOM 28 O5' G A 6 30.240 3.612 49.313 1.00 29.48 O
TER
ATOM 1 O3' G B 3 31.114 -10.268 47.598 1.00 16.33 O
ATOM 2 P C B 4 30.388 -8.984 46.967 1.00 19.99 P
ATOM 3 OP1 C B 4 28.954 -9.305 46.834 1.00 21.93 O
ATOM 4 OP2 C B 4 31.139 -8.556 45.776 1.00 21.70 O
ATOM 5 O5' C B 4 30.573 -7.850 48.093 1.00 16.01 O
ATOM 6 C5' C B 4 30.097 -8.121 49.412 1.00 15.64 C
ATOM 7 C4' C B 4 30.519 -7.063 50.414 1.00 19.29 C
ATOM 8 O4' C B 4 31.955 -7.097 50.595 1.00 17.19 O
ATOM 9 C3' C B 4 30.208 -5.640 49.992 1.00 17.57 C
ATOM 10 O3' C B 4 28.892 -5.302 50.400 1.00 22.77 O
ATOM 11 C2' C B 4 31.245 -4.855 50.777 1.00 22.86 C
ATOM 12 O2' C B 4 30.877 -4.703 52.131 1.00 19.99 O
ATOM 13 C1' C B 4 32.453 -5.781 50.706 1.00 19.91 C
ATOM 14 N1 C B 4 33.359 -5.491 49.566 1.00 22.77 N
ATOM 15 C2 C B 4 34.304 -4.480 49.714 1.00 20.93 C
ATOM 16 O2 C B 4 34.339 -3.875 50.787 1.00 21.14 O
ATOM 17 N3 C B 4 35.144 -4.198 48.684 1.00 21.74 N
ATOM 18 C4 C B 4 35.059 -4.895 47.547 1.00 21.32 C
ATOM 19 N4 C B 4 35.903 -4.588 46.549 1.00 20.80 N
ATOM 20 C5 C B 4 34.095 -5.929 47.382 1.00 20.50 C
ATOM 21 C6 C B 4 33.266 -6.185 48.400 1.00 18.34 C
ATOM 22 P G B 5 28.245 -3.990 49.758 1.00 26.33 P
ATOM 23 OP1 G B 5 26.810 -3.924 50.137 1.00 27.37 O
ATOM 24 OP2 G B 5 28.614 -3.967 48.323 1.00 23.86 O
ATOM 25 O5' G B 5 29.050 -2.846 50.533 1.00 20.43 O
TER
ATOM 2 P G A 5 28.245 -3.990 49.758 1.00 26.33 P
ATOM 3 OP1 G A 5 26.810 -3.924 50.137 1.00 27.37 O
ATOM 4 OP2 G A 5 28.614 -3.967 48.323 1.00 23.86 O
ATOM 5 O5' G A 5 29.050 -2.846 50.533 1.00 20.43 O
ATOM 6 C5' G A 5 29.092 -1.540 49.988 1.00 23.33 C
ATOM 7 C4' G A 5 29.912 -0.641 50.881 1.00 24.50 C
ATOM 8 O4' G A 5 31.177 -1.293 51.147 1.00 21.60 O
ATOM 9 C3' G A 5 30.298 0.697 50.269 1.00 21.21 C
ATOM 10 O3' G A 5 29.239 1.619 50.410 1.00 26.02 O
ATOM 11 C2' G A 5 31.463 1.044 51.176 1.00 26.61 C
ATOM 12 O2' G A 5 31.025 1.414 52.468 1.00 29.05 O
ATOM 13 C1' G A 5 32.179 -0.303 51.213 1.00 21.72 C
ATOM 14 N9 G A 5 33.069 -0.397 50.069 1.00 27.27 N
ATOM 15 C8 G A 5 34.239 0.315 49.933 1.00 26.34 C
ATOM 16 N7 G A 5 34.858 0.082 48.812 1.00 26.71 N
ATOM 17 C5 G A 5 34.053 -0.845 48.168 1.00 25.39 C
ATOM 18 C6 G A 5 34.242 -1.454 46.911 1.00 22.57 C
ATOM 19 O6 G A 5 35.183 -1.263 46.128 1.00 23.99 O
ATOM 20 N1 G A 5 33.205 -2.334 46.603 1.00 21.33 N
ATOM 21 C2 G A 5 32.124 -2.580 47.422 1.00 20.84 C
ATOM 22 N2 G A 5 31.219 -3.456 46.971 1.00 22.67 N
ATOM 23 N3 G A 5 31.936 -2.007 48.609 1.00 23.48 N
ATOM 24 C4 G A 5 32.939 -1.149 48.919 1.00 21.20 C
ATOM 25 P G A 6 28.942 2.690 49.255 1.00 25.67 P
ATOM 26 OP1 G A 6 27.764 3.480 49.672 1.00 25.48 O
ATOM 27 OP2 G A 6 28.940 1.997 47.947 1.00 20.65 O
ATOM 28 O5' G A 6 30.240 3.612 49.313 1.00 29.48 O
TER
ATOM 1 O3' G B 3 31.114 -10.268 47.598 1.00 16.33 O
ATOM 2 P C B 4 30.388 -8.984 46.967 1.00 19.99 P
ATOM 3 OP1 C B 4 28.954 -9.305 46.834 1.00 21.93 O
ATOM 4 OP2 C B 4 31.139 -8.556 45.776 1.00 21.70 O
ATOM 5 O5' C B 4 30.573 -7.850 48.093 1.00 16.01 O
ATOM 6 C5' C B 4 30.097 -8.121 49.412 1.00 15.64 C
ATOM 7 C4' C B 4 30.519 -7.063 50.414 1.00 19.29 C
ATOM 8 O4' C B 4 31.955 -7.097 50.595 1.00 17.19 O
ATOM 9 C3' C B 4 30.208 -5.640 49.992 1.00 17.57 C
ATOM 10 O3' C B 4 28.892 -5.302 50.400 1.00 22.77 O
ATOM 11 C2' C B 4 31.245 -4.855 50.777 1.00 22.86 C
ATOM 12 O2' C B 4 30.877 -4.703 52.131 1.00 19.99 O
ATOM 13 C1' C B 4 32.453 -5.781 50.706 1.00 19.91 C
ATOM 14 N1 C B 4 33.359 -5.491 49.566 1.00 22.77 N
ATOM 15 C2 C B 4 34.304 -4.480 49.714 1.00 20.93 C
ATOM 16 O2 C B 4 34.339 -3.875 50.787 1.00 21.14 O
ATOM 17 N3 C B 4 35.144 -4.198 48.684 1.00 21.74 N
ATOM 18 C4 C B 4 35.059 -4.895 47.547 1.00 21.32 C
ATOM 19 N4 C B 4 35.903 -4.588 46.549 1.00 20.80 N
ATOM 20 C5 C B 4 34.095 -5.929 47.382 1.00 20.50 C
ATOM 21 C6 C B 4 33.266 -6.185 48.400 1.00 18.34 C
ATOM 22 P G B 5 28.245 -3.990 49.758 1.00 26.33 P
ATOM 23 OP1 G B 5 26.810 -3.924 50.137 1.00 27.37 O
ATOM 24 OP2 G B 5 28.614 -3.967 48.323 1.00 23.86 O
ATOM 25 O5' G B 5 29.050 -2.846 50.533 1.00 20.43 O
TER
Atoms:
OP1: (26.810,-3.924,50.137)
OP2: (28.614,-3.967,48.323)
C3': (30.298,0.697,50.269)
C1': (32.179,-0.303,51.213)
C5': (29.092,-1.540,49.988)
O6: (35.183,-1.263,46.128)
O4': (31.177,-1.293,51.147)
C8: (34.239,0.315,49.933)
C2: (32.124,-2.580,47.422)
C6: (34.242,-1.454,46.911)
C5: (34.053,-0.845,48.168)
C4: (32.939,-1.149,48.919)
P: (28.245,-3.990,49.758)
C4': (29.912,-0.641,50.881)
C2': (31.463,1.044,51.176)
O2': (31.025,1.414,52.468)
N1: (33.205,-2.334,46.603)
N2: (31.219,-3.456,46.971)
N3: (31.936,-2.007,48.609)
N7: (34.858,0.082,48.812)
N9: (33.069,-0.397,50.069)
O5': (29.050,-2.846,50.533)
O3': (29.239,1.619,50.410)
OP2: (28.614,-3.967,48.323)
C3': (30.298,0.697,50.269)
C1': (32.179,-0.303,51.213)
C5': (29.092,-1.540,49.988)
O6: (35.183,-1.263,46.128)
O4': (31.177,-1.293,51.147)
C8: (34.239,0.315,49.933)
C2: (32.124,-2.580,47.422)
C6: (34.242,-1.454,46.911)
C5: (34.053,-0.845,48.168)
C4: (32.939,-1.149,48.919)
P: (28.245,-3.990,49.758)
C4': (29.912,-0.641,50.881)
C2': (31.463,1.044,51.176)
O2': (31.025,1.414,52.468)
N1: (33.205,-2.334,46.603)
N2: (31.219,-3.456,46.971)
N3: (31.936,-2.007,48.609)
N7: (34.858,0.082,48.812)
N9: (33.069,-0.397,50.069)
O5': (29.050,-2.846,50.533)
O3': (29.239,1.619,50.410)
C2: (34.304,-4.480,49.714)
OP1: (28.954,-9.305,46.834)
OP2: (31.139,-8.556,45.776)
C4: (35.059,-4.895,47.547)
O5': (30.573,-7.850,48.093)
C3': (30.208,-5.640,49.992)
C1': (32.453,-5.781,50.706)
O4': (31.955,-7.097,50.595)
C5': (30.097,-8.121,49.412)
P: (30.388,-8.984,46.967)
O2: (34.339,-3.875,50.787)
C4': (30.519,-7.063,50.414)
C2': (31.245,-4.855,50.777)
O2': (30.877,-4.703,52.131)
N1: (33.359,-5.491,49.566)
N3: (35.144,-4.198,48.684)
N4: (35.903,-4.588,46.549)
C6: (33.266,-6.185,48.400)
C5: (34.095,-5.929,47.382)
O3': (28.892,-5.302,50.400)
OP1: (28.954,-9.305,46.834)
OP2: (31.139,-8.556,45.776)
C4: (35.059,-4.895,47.547)
O5': (30.573,-7.850,48.093)
C3': (30.208,-5.640,49.992)
C1': (32.453,-5.781,50.706)
O4': (31.955,-7.097,50.595)
C5': (30.097,-8.121,49.412)
P: (30.388,-8.984,46.967)
O2: (34.339,-3.875,50.787)
C4': (30.519,-7.063,50.414)
C2': (31.245,-4.855,50.777)
O2': (30.877,-4.703,52.131)
N1: (33.359,-5.491,49.566)
N3: (35.144,-4.198,48.684)
N4: (35.903,-4.588,46.549)
C6: (33.266,-6.185,48.400)
C5: (34.095,-5.929,47.382)
O3': (28.892,-5.302,50.400)
Image (generated by PyMOL):