Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2GCV:B11:A4
Extra
PDB:
ATOM 1 O3' U A 10 56.024 16.468 25.766 1.00 24.65 O
ATOM 2 P G A 11 54.914 15.412 25.274 1.00 25.59 P
ATOM 3 OP1 G A 11 53.606 15.993 25.675 1.00 26.00 O
ATOM 4 OP2 G A 11 55.293 14.065 25.746 1.00 24.54 O
ATOM 5 O5' G A 11 55.035 15.415 23.682 1.00 24.63 O
ATOM 6 C5' G A 11 54.934 16.630 22.944 1.00 23.17 C
ATOM 7 C4' G A 11 55.533 16.455 21.566 1.00 23.21 C
ATOM 8 O4' G A 11 56.958 16.203 21.686 1.00 23.62 O
ATOM 9 C3' G A 11 55.001 15.279 20.756 1.00 23.31 C
ATOM 10 O3' G A 11 53.833 15.672 20.046 1.00 24.67 O
ATOM 11 C2' G A 11 56.151 15.019 19.780 1.00 24.27 C
ATOM 12 O2' G A 11 56.141 15.901 18.670 1.00 22.31 O
ATOM 13 C1' G A 11 57.372 15.315 20.658 1.00 23.37 C
ATOM 14 N9 G A 11 57.936 14.119 21.274 1.00 22.27 N
ATOM 15 C8 G A 11 57.525 13.503 22.432 1.00 23.51 C
ATOM 16 N7 G A 11 58.220 12.436 22.719 1.00 24.02 N
ATOM 17 C5 G A 11 59.153 12.345 21.690 1.00 26.12 C
ATOM 18 C6 G A 11 60.187 11.389 21.458 1.00 25.16 C
ATOM 19 O6 G A 11 60.497 10.406 22.138 1.00 24.06 O
ATOM 20 N1 G A 11 60.893 11.674 20.292 1.00 27.49 N
ATOM 21 C2 G A 11 60.643 12.736 19.458 1.00 27.43 C
ATOM 22 N2 G A 11 61.427 12.839 18.378 1.00 25.16 N
ATOM 23 N3 G A 11 59.691 13.631 19.666 1.00 25.12 N
ATOM 24 C4 G A 11 58.990 13.375 20.791 1.00 24.58 C
ATOM 25 P A A 12 52.415 14.973 20.350 1.00 27.49 P
ATOM 26 OP1 A A 12 52.355 14.493 21.759 1.00 24.31 O
ATOM 27 OP2 A A 12 52.192 14.013 19.244 1.00 26.15 O
ATOM 28 O5' A A 12 51.378 16.175 20.165 1.00 28.41 O
TER
ATOM 1 O3' C B 3 58.214 4.643 22.463 1.00 37.98 O
ATOM 2 P C B 4 59.465 5.570 22.839 1.00 39.89 P
ATOM 3 OP1 C B 4 60.512 4.717 23.457 1.00 42.10 O
ATOM 4 OP2 C B 4 58.971 6.768 23.563 1.00 37.74 O
ATOM 5 O5' C B 4 59.960 6.025 21.406 1.00 40.28 O
ATOM 6 C5' C B 4 61.160 6.719 21.248 1.00 45.07 C
ATOM 7 C4' C B 4 61.749 6.378 19.920 1.00 47.58 C
ATOM 8 O4' C B 4 60.769 6.676 18.891 1.00 46.51 O
ATOM 9 C3' C B 4 62.945 7.226 19.586 1.00 50.06 C
ATOM 10 O3' C B 4 64.253 6.879 20.007 1.00 56.32 O
ATOM 11 C2' C B 4 62.475 8.372 18.704 1.00 49.31 C
ATOM 12 O2' C B 4 63.349 8.641 17.625 1.00 53.05 O
ATOM 13 C1' C B 4 61.140 7.844 18.171 1.00 45.54 C
ATOM 14 N1 C B 4 60.039 8.824 18.281 1.00 41.55 N
ATOM 15 C2 C B 4 59.921 9.828 17.306 1.00 35.86 C
ATOM 16 O2 C B 4 60.753 9.874 16.393 1.00 32.99 O
ATOM 17 N3 C B 4 58.904 10.719 17.389 1.00 32.44 N
ATOM 18 C4 C B 4 58.028 10.640 18.393 1.00 31.96 C
ATOM 19 N4 C B 4 57.040 11.539 18.434 1.00 27.66 N
ATOM 20 C5 C B 4 58.126 9.635 19.402 1.00 35.44 C
ATOM 21 C6 C B 4 59.139 8.757 19.309 1.00 37.35 C
ATOM 22 P U B 5 65.344 6.410 18.932 1.00 60.77 P
ATOM 23 OP1 U B 5 64.738 6.445 17.574 1.00 60.47 O
ATOM 24 OP2 U B 5 65.882 5.131 19.455 1.00 61.35 O
ATOM 25 O5' U B 5 66.465 7.544 19.036 1.00 61.33 O
TER
ATOM 2 P G A 11 54.914 15.412 25.274 1.00 25.59 P
ATOM 3 OP1 G A 11 53.606 15.993 25.675 1.00 26.00 O
ATOM 4 OP2 G A 11 55.293 14.065 25.746 1.00 24.54 O
ATOM 5 O5' G A 11 55.035 15.415 23.682 1.00 24.63 O
ATOM 6 C5' G A 11 54.934 16.630 22.944 1.00 23.17 C
ATOM 7 C4' G A 11 55.533 16.455 21.566 1.00 23.21 C
ATOM 8 O4' G A 11 56.958 16.203 21.686 1.00 23.62 O
ATOM 9 C3' G A 11 55.001 15.279 20.756 1.00 23.31 C
ATOM 10 O3' G A 11 53.833 15.672 20.046 1.00 24.67 O
ATOM 11 C2' G A 11 56.151 15.019 19.780 1.00 24.27 C
ATOM 12 O2' G A 11 56.141 15.901 18.670 1.00 22.31 O
ATOM 13 C1' G A 11 57.372 15.315 20.658 1.00 23.37 C
ATOM 14 N9 G A 11 57.936 14.119 21.274 1.00 22.27 N
ATOM 15 C8 G A 11 57.525 13.503 22.432 1.00 23.51 C
ATOM 16 N7 G A 11 58.220 12.436 22.719 1.00 24.02 N
ATOM 17 C5 G A 11 59.153 12.345 21.690 1.00 26.12 C
ATOM 18 C6 G A 11 60.187 11.389 21.458 1.00 25.16 C
ATOM 19 O6 G A 11 60.497 10.406 22.138 1.00 24.06 O
ATOM 20 N1 G A 11 60.893 11.674 20.292 1.00 27.49 N
ATOM 21 C2 G A 11 60.643 12.736 19.458 1.00 27.43 C
ATOM 22 N2 G A 11 61.427 12.839 18.378 1.00 25.16 N
ATOM 23 N3 G A 11 59.691 13.631 19.666 1.00 25.12 N
ATOM 24 C4 G A 11 58.990 13.375 20.791 1.00 24.58 C
ATOM 25 P A A 12 52.415 14.973 20.350 1.00 27.49 P
ATOM 26 OP1 A A 12 52.355 14.493 21.759 1.00 24.31 O
ATOM 27 OP2 A A 12 52.192 14.013 19.244 1.00 26.15 O
ATOM 28 O5' A A 12 51.378 16.175 20.165 1.00 28.41 O
TER
ATOM 1 O3' C B 3 58.214 4.643 22.463 1.00 37.98 O
ATOM 2 P C B 4 59.465 5.570 22.839 1.00 39.89 P
ATOM 3 OP1 C B 4 60.512 4.717 23.457 1.00 42.10 O
ATOM 4 OP2 C B 4 58.971 6.768 23.563 1.00 37.74 O
ATOM 5 O5' C B 4 59.960 6.025 21.406 1.00 40.28 O
ATOM 6 C5' C B 4 61.160 6.719 21.248 1.00 45.07 C
ATOM 7 C4' C B 4 61.749 6.378 19.920 1.00 47.58 C
ATOM 8 O4' C B 4 60.769 6.676 18.891 1.00 46.51 O
ATOM 9 C3' C B 4 62.945 7.226 19.586 1.00 50.06 C
ATOM 10 O3' C B 4 64.253 6.879 20.007 1.00 56.32 O
ATOM 11 C2' C B 4 62.475 8.372 18.704 1.00 49.31 C
ATOM 12 O2' C B 4 63.349 8.641 17.625 1.00 53.05 O
ATOM 13 C1' C B 4 61.140 7.844 18.171 1.00 45.54 C
ATOM 14 N1 C B 4 60.039 8.824 18.281 1.00 41.55 N
ATOM 15 C2 C B 4 59.921 9.828 17.306 1.00 35.86 C
ATOM 16 O2 C B 4 60.753 9.874 16.393 1.00 32.99 O
ATOM 17 N3 C B 4 58.904 10.719 17.389 1.00 32.44 N
ATOM 18 C4 C B 4 58.028 10.640 18.393 1.00 31.96 C
ATOM 19 N4 C B 4 57.040 11.539 18.434 1.00 27.66 N
ATOM 20 C5 C B 4 58.126 9.635 19.402 1.00 35.44 C
ATOM 21 C6 C B 4 59.139 8.757 19.309 1.00 37.35 C
ATOM 22 P U B 5 65.344 6.410 18.932 1.00 60.77 P
ATOM 23 OP1 U B 5 64.738 6.445 17.574 1.00 60.47 O
ATOM 24 OP2 U B 5 65.882 5.131 19.455 1.00 61.35 O
ATOM 25 O5' U B 5 66.465 7.544 19.036 1.00 61.33 O
TER
Atoms:
OP1: (53.606,15.993,25.675)
OP2: (55.293,14.065,25.746)
C3': (55.001,15.279,20.756)
C1': (57.372,15.315,20.658)
C5': (54.934,16.630,22.944)
O6: (60.497,10.406,22.138)
O4': (56.958,16.203,21.686)
C8: (57.525,13.503,22.432)
C2: (60.643,12.736,19.458)
C6: (60.187,11.389,21.458)
C5: (59.153,12.345,21.690)
C4: (58.990,13.375,20.791)
P: (54.914,15.412,25.274)
C4': (55.533,16.455,21.566)
C2': (56.151,15.019,19.780)
O2': (56.141,15.901,18.670)
N1: (60.893,11.674,20.292)
N2: (61.427,12.839,18.378)
N3: (59.691,13.631,19.666)
N7: (58.220,12.436,22.719)
N9: (57.936,14.119,21.274)
O5': (55.035,15.415,23.682)
O3': (53.833,15.672,20.046)
OP2: (55.293,14.065,25.746)
C3': (55.001,15.279,20.756)
C1': (57.372,15.315,20.658)
C5': (54.934,16.630,22.944)
O6: (60.497,10.406,22.138)
O4': (56.958,16.203,21.686)
C8: (57.525,13.503,22.432)
C2: (60.643,12.736,19.458)
C6: (60.187,11.389,21.458)
C5: (59.153,12.345,21.690)
C4: (58.990,13.375,20.791)
P: (54.914,15.412,25.274)
C4': (55.533,16.455,21.566)
C2': (56.151,15.019,19.780)
O2': (56.141,15.901,18.670)
N1: (60.893,11.674,20.292)
N2: (61.427,12.839,18.378)
N3: (59.691,13.631,19.666)
N7: (58.220,12.436,22.719)
N9: (57.936,14.119,21.274)
O5': (55.035,15.415,23.682)
O3': (53.833,15.672,20.046)
C2: (59.921,9.828,17.306)
OP1: (60.512,4.717,23.457)
OP2: (58.971,6.768,23.563)
C4: (58.028,10.640,18.393)
O5': (59.960,6.025,21.406)
C3': (62.945,7.226,19.586)
C1': (61.140,7.844,18.171)
O4': (60.769,6.676,18.891)
C5': (61.160,6.719,21.248)
P: (59.465,5.570,22.839)
O2: (60.753,9.874,16.393)
C4': (61.749,6.378,19.920)
C2': (62.475,8.372,18.704)
O2': (63.349,8.641,17.625)
N1: (60.039,8.824,18.281)
N3: (58.904,10.719,17.389)
N4: (57.040,11.539,18.434)
C6: (59.139,8.757,19.309)
C5: (58.126,9.635,19.402)
O3': (64.253,6.879,20.007)
OP1: (60.512,4.717,23.457)
OP2: (58.971,6.768,23.563)
C4: (58.028,10.640,18.393)
O5': (59.960,6.025,21.406)
C3': (62.945,7.226,19.586)
C1': (61.140,7.844,18.171)
O4': (60.769,6.676,18.891)
C5': (61.160,6.719,21.248)
P: (59.465,5.570,22.839)
O2: (60.753,9.874,16.393)
C4': (61.749,6.378,19.920)
C2': (62.475,8.372,18.704)
O2': (63.349,8.641,17.625)
N1: (60.039,8.824,18.281)
N3: (58.904,10.719,17.389)
N4: (57.040,11.539,18.434)
C6: (59.139,8.757,19.309)
C5: (58.126,9.635,19.402)
O3': (64.253,6.879,20.007)
Image (generated by PyMOL):