ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2PXF:B32:B17

Extra

PDB:
ATOM 1 O3' A A 31 95.884 -43.234 56.989 1.00 46.62 O
ATOM 2 P G A 32 96.562 -42.364 58.155 1.00 47.23 P
ATOM 3 OP1 G A 32 98.009 -42.225 57.844 1.00 45.13 O
ATOM 4 OP2 G A 32 96.137 -42.938 59.456 1.00 43.54 O
ATOM 5 O5' G A 32 95.890 -40.928 58.003 1.00 43.53 O
ATOM 6 C5' G A 32 96.210 -40.101 56.897 1.00 40.85 C
ATOM 7 C4' G A 32 95.318 -38.885 56.880 1.00 39.84 C
ATOM 8 O4' G A 32 93.950 -39.330 57.012 1.00 38.55 O
ATOM 9 C3' G A 32 95.472 -37.899 58.025 1.00 38.61 C
ATOM 10 O3' G A 32 96.524 -36.985 57.739 1.00 40.81 O
ATOM 11 C2' G A 32 94.128 -37.183 58.003 1.00 38.16 C
ATOM 12 O2' G A 32 94.057 -36.157 57.021 1.00 39.76 O
ATOM 13 C1' G A 32 93.183 -38.330 57.650 1.00 34.91 C
ATOM 14 N9 G A 32 92.541 -38.929 58.809 1.00 29.03 N
ATOM 15 C8 G A 32 92.853 -40.124 59.411 1.00 28.26 C
ATOM 16 N7 G A 32 92.106 -40.384 60.451 1.00 28.00 N
ATOM 17 C5 G A 32 91.244 -39.298 60.533 1.00 27.29 C
ATOM 18 C6 G A 32 90.208 -39.025 61.443 1.00 28.20 C
ATOM 19 O6 G A 32 89.833 -39.708 62.402 1.00 30.92 O
ATOM 20 N1 G A 32 89.579 -37.812 61.155 1.00 28.08 N
ATOM 21 C2 G A 32 89.915 -36.974 60.114 1.00 26.50 C
ATOM 22 N2 G A 32 89.227 -35.824 60.003 1.00 25.12 N
ATOM 23 N3 G A 32 90.868 -37.235 59.250 1.00 27.05 N
ATOM 24 C4 G A 32 91.494 -38.398 59.520 1.00 28.11 C
ATOM 25 P C A 33 97.029 -35.949 58.869 1.00 38.29 P
ATOM 26 OP1 C A 33 98.519 -36.024 58.806 1.00 36.98 O
ATOM 27 OP2 C A 33 96.327 -36.221 60.153 1.00 34.53 O
ATOM 28 O5' C A 33 96.570 -34.523 58.317 1.00 34.97 O
TER

ATOM 1 O3' U B 16 90.656 -39.648 68.766 1.00 56.97 O
ATOM 2 P C B 17 89.941 -40.458 67.576 1.00 74.88 P
ATOM 3 OP1 C B 17 88.717 -41.111 68.105 1.00 48.41 O
ATOM 4 OP2 C B 17 90.988 -41.286 66.921 1.00 48.62 O
ATOM 5 O5' C B 17 89.477 -39.297 66.596 1.00 74.45 O
ATOM 6 C5' C B 17 88.701 -38.235 67.116 1.00 73.81 C
ATOM 7 C4' C B 17 89.043 -36.942 66.435 1.00 73.78 C
ATOM 8 O4' C B 17 90.476 -36.839 66.246 1.00 73.94 O
ATOM 9 C3' C B 17 88.536 -36.761 65.023 1.00 74.86 C
ATOM 10 O3' C B 17 87.163 -36.402 65.044 1.00 77.12 O
ATOM 11 C2' C B 17 89.391 -35.592 64.547 1.00 73.93 C
ATOM 12 O2' C B 17 88.922 -34.358 65.049 1.00 75.28 O
ATOM 13 C1' C B 17 90.732 -35.912 65.204 1.00 71.11 C
ATOM 14 N1 C B 17 91.717 -36.472 64.269 1.00 40.50 N
ATOM 15 C2 C B 17 92.247 -35.624 63.294 1.00 39.04 C
ATOM 16 O2 C B 17 91.847 -34.453 63.250 1.00 39.15 O
ATOM 17 N3 C B 17 93.170 -36.097 62.424 1.00 36.14 N
ATOM 18 C4 C B 17 93.552 -37.373 62.497 1.00 35.53 C
ATOM 19 N4 C B 17 94.456 -37.811 61.610 1.00 34.04 N
ATOM 20 C5 C B 17 93.023 -38.265 63.482 1.00 36.34 C
ATOM 21 C6 C B 17 92.117 -37.775 64.341 1.00 38.42 C
ATOM 22 P A B 18 86.450 -35.942 63.686 1.00 61.98 P
ATOM 23 OP1 A B 18 85.122 -36.608 63.623 1.00 56.84 O
ATOM 24 OP2 A B 18 87.439 -36.183 62.602 1.00 55.41 O
ATOM 25 O5' A B 18 86.248 -34.369 63.893 1.00 57.91 O
TER

Atoms:
OP1: (98.009,-42.225,57.844)
OP2: (96.137,-42.938,59.456)
C3': (95.472,-37.899,58.025)
C1': (93.183,-38.330,57.650)
C5': (96.210,-40.101,56.897)
O6: (89.833,-39.708,62.402)
O4': (93.950,-39.330,57.012)
C8: (92.853,-40.124,59.411)
C2: (89.915,-36.974,60.114)
C6: (90.208,-39.025,61.443)
C5: (91.244,-39.298,60.533)
C4: (91.494,-38.398,59.520)
P: (96.562,-42.364,58.155)
C4': (95.318,-38.885,56.880)
C2': (94.128,-37.183,58.003)
O2': (94.057,-36.157,57.021)
N1: (89.579,-37.812,61.155)
N2: (89.227,-35.824,60.003)
N3: (90.868,-37.235,59.250)
N7: (92.106,-40.384,60.451)
N9: (92.541,-38.929,58.809)
O5': (95.890,-40.928,58.003)
O3': (96.524,-36.985,57.739)
C2: (92.247,-35.624,63.294)
OP1: (88.717,-41.111,68.105)
OP2: (90.988,-41.286,66.921)
C4: (93.552,-37.373,62.497)
O5': (89.477,-39.297,66.596)
C3': (88.536,-36.761,65.023)
C1': (90.732,-35.912,65.204)
O4': (90.476,-36.839,66.246)
C5': (88.701,-38.235,67.116)
P: (89.941,-40.458,67.576)
O2: (91.847,-34.453,63.250)
C4': (89.043,-36.942,66.435)
C2': (89.391,-35.592,64.547)
O2': (88.922,-34.358,65.049)
N1: (91.717,-36.472,64.269)
N3: (93.170,-36.097,62.424)
N4: (94.456,-37.811,61.610)
C6: (92.117,-37.775,64.341)
C5: (93.023,-38.265,63.482)
O3': (87.163,-36.402,65.044)
Image (generated by PyMOL):
PyMOL image
show in jmol