Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2GCS:B11:A5
Extra
PDB:
ATOM 1 O3' U A 10 56.254 16.001 25.887 1.00 19.66 O
ATOM 2 P G A 11 55.132 14.915 25.480 1.00 24.69 P
ATOM 3 OP1 G A 11 53.822 15.519 25.850 1.00 24.99 O
ATOM 4 OP2 G A 11 55.498 13.576 26.008 1.00 21.72 O
ATOM 5 O5' G A 11 55.216 14.818 23.889 1.00 21.17 O
ATOM 6 C5' G A 11 55.063 15.979 23.078 1.00 23.75 C
ATOM 7 C4' G A 11 55.650 15.740 21.705 1.00 23.45 C
ATOM 8 O4' G A 11 57.073 15.468 21.826 1.00 24.13 O
ATOM 9 C3' G A 11 55.098 14.537 20.951 1.00 23.17 C
ATOM 10 O3' G A 11 53.914 14.918 20.252 1.00 25.12 O
ATOM 11 C2' G A 11 56.233 14.231 19.972 1.00 25.41 C
ATOM 12 O2' G A 11 56.211 15.078 18.836 1.00 23.54 O
ATOM 13 C1' G A 11 57.470 14.549 20.822 1.00 22.35 C
ATOM 14 N9 G A 11 58.047 13.380 21.477 1.00 22.72 N
ATOM 15 C8 G A 11 57.640 12.806 22.660 1.00 24.44 C
ATOM 16 N7 G A 11 58.342 11.756 22.985 1.00 25.69 N
ATOM 17 C5 G A 11 59.271 11.631 21.960 1.00 25.63 C
ATOM 18 C6 G A 11 60.300 10.672 21.764 1.00 25.76 C
ATOM 19 O6 G A 11 60.600 9.714 22.478 1.00 25.78 O
ATOM 20 N1 G A 11 61.011 10.915 20.592 1.00 23.66 N
ATOM 21 C2 G A 11 60.765 11.947 19.718 1.00 27.63 C
ATOM 22 N2 G A 11 61.557 12.011 18.634 1.00 20.77 N
ATOM 23 N3 G A 11 59.808 12.849 19.892 1.00 25.94 N
ATOM 24 C4 G A 11 59.104 12.629 21.024 1.00 23.01 C
ATOM 25 P A A 12 52.504 14.217 20.600 1.00 25.71 P
ATOM 26 OP1 A A 12 52.482 13.810 22.032 1.00 24.22 O
ATOM 27 OP2 A A 12 52.255 13.193 19.553 1.00 22.50 O
ATOM 28 O5' A A 12 51.449 15.404 20.408 1.00 25.60 O
TER
ATOM 1 O3' C B 4 58.277 3.711 22.823 1.00 40.18 O
ATOM 2 P C B 5 59.546 4.616 23.189 1.00 43.34 P
ATOM 3 OP1 C B 5 60.564 3.747 23.833 1.00 42.31 O
ATOM 4 OP2 C B 5 59.084 5.845 23.878 1.00 40.59 O
ATOM 5 O5' C B 5 60.074 5.032 21.755 1.00 42.88 O
ATOM 6 C5' C B 5 61.118 5.953 21.614 1.00 46.20 C
ATOM 7 C4' C B 5 61.847 5.680 20.337 1.00 47.20 C
ATOM 8 O4' C B 5 60.953 5.956 19.224 1.00 43.59 O
ATOM 9 C3' C B 5 63.028 6.595 20.142 1.00 49.59 C
ATOM 10 O3' C B 5 64.342 6.144 20.447 1.00 55.47 O
ATOM 11 C2' C B 5 62.591 7.732 19.225 1.00 49.10 C
ATOM 12 O2' C B 5 63.544 8.016 18.219 1.00 54.31 O
ATOM 13 C1' C B 5 61.336 7.152 18.559 1.00 45.70 C
ATOM 14 N1 C B 5 60.192 8.084 18.591 1.00 40.90 N
ATOM 15 C2 C B 5 60.091 9.070 17.595 1.00 39.69 C
ATOM 16 O2 C B 5 60.956 9.120 16.708 1.00 40.55 O
ATOM 17 N3 C B 5 59.055 9.941 17.627 1.00 34.97 N
ATOM 18 C4 C B 5 58.143 9.857 18.599 1.00 36.03 C
ATOM 19 N4 C B 5 57.142 10.743 18.596 1.00 30.56 N
ATOM 20 C5 C B 5 58.217 8.861 19.619 1.00 36.49 C
ATOM 21 C6 C B 5 59.248 8.003 19.576 1.00 38.75 C
ATOM 22 P U B 6 65.314 5.645 19.273 1.00 59.51 P
ATOM 23 OP1 U B 6 64.508 5.419 18.046 1.00 58.54 O
ATOM 24 OP2 U B 6 66.102 4.525 19.841 1.00 61.07 O
ATOM 25 O5' U B 6 66.282 6.891 19.036 1.00 60.65 O
TER
ATOM 2 P G A 11 55.132 14.915 25.480 1.00 24.69 P
ATOM 3 OP1 G A 11 53.822 15.519 25.850 1.00 24.99 O
ATOM 4 OP2 G A 11 55.498 13.576 26.008 1.00 21.72 O
ATOM 5 O5' G A 11 55.216 14.818 23.889 1.00 21.17 O
ATOM 6 C5' G A 11 55.063 15.979 23.078 1.00 23.75 C
ATOM 7 C4' G A 11 55.650 15.740 21.705 1.00 23.45 C
ATOM 8 O4' G A 11 57.073 15.468 21.826 1.00 24.13 O
ATOM 9 C3' G A 11 55.098 14.537 20.951 1.00 23.17 C
ATOM 10 O3' G A 11 53.914 14.918 20.252 1.00 25.12 O
ATOM 11 C2' G A 11 56.233 14.231 19.972 1.00 25.41 C
ATOM 12 O2' G A 11 56.211 15.078 18.836 1.00 23.54 O
ATOM 13 C1' G A 11 57.470 14.549 20.822 1.00 22.35 C
ATOM 14 N9 G A 11 58.047 13.380 21.477 1.00 22.72 N
ATOM 15 C8 G A 11 57.640 12.806 22.660 1.00 24.44 C
ATOM 16 N7 G A 11 58.342 11.756 22.985 1.00 25.69 N
ATOM 17 C5 G A 11 59.271 11.631 21.960 1.00 25.63 C
ATOM 18 C6 G A 11 60.300 10.672 21.764 1.00 25.76 C
ATOM 19 O6 G A 11 60.600 9.714 22.478 1.00 25.78 O
ATOM 20 N1 G A 11 61.011 10.915 20.592 1.00 23.66 N
ATOM 21 C2 G A 11 60.765 11.947 19.718 1.00 27.63 C
ATOM 22 N2 G A 11 61.557 12.011 18.634 1.00 20.77 N
ATOM 23 N3 G A 11 59.808 12.849 19.892 1.00 25.94 N
ATOM 24 C4 G A 11 59.104 12.629 21.024 1.00 23.01 C
ATOM 25 P A A 12 52.504 14.217 20.600 1.00 25.71 P
ATOM 26 OP1 A A 12 52.482 13.810 22.032 1.00 24.22 O
ATOM 27 OP2 A A 12 52.255 13.193 19.553 1.00 22.50 O
ATOM 28 O5' A A 12 51.449 15.404 20.408 1.00 25.60 O
TER
ATOM 1 O3' C B 4 58.277 3.711 22.823 1.00 40.18 O
ATOM 2 P C B 5 59.546 4.616 23.189 1.00 43.34 P
ATOM 3 OP1 C B 5 60.564 3.747 23.833 1.00 42.31 O
ATOM 4 OP2 C B 5 59.084 5.845 23.878 1.00 40.59 O
ATOM 5 O5' C B 5 60.074 5.032 21.755 1.00 42.88 O
ATOM 6 C5' C B 5 61.118 5.953 21.614 1.00 46.20 C
ATOM 7 C4' C B 5 61.847 5.680 20.337 1.00 47.20 C
ATOM 8 O4' C B 5 60.953 5.956 19.224 1.00 43.59 O
ATOM 9 C3' C B 5 63.028 6.595 20.142 1.00 49.59 C
ATOM 10 O3' C B 5 64.342 6.144 20.447 1.00 55.47 O
ATOM 11 C2' C B 5 62.591 7.732 19.225 1.00 49.10 C
ATOM 12 O2' C B 5 63.544 8.016 18.219 1.00 54.31 O
ATOM 13 C1' C B 5 61.336 7.152 18.559 1.00 45.70 C
ATOM 14 N1 C B 5 60.192 8.084 18.591 1.00 40.90 N
ATOM 15 C2 C B 5 60.091 9.070 17.595 1.00 39.69 C
ATOM 16 O2 C B 5 60.956 9.120 16.708 1.00 40.55 O
ATOM 17 N3 C B 5 59.055 9.941 17.627 1.00 34.97 N
ATOM 18 C4 C B 5 58.143 9.857 18.599 1.00 36.03 C
ATOM 19 N4 C B 5 57.142 10.743 18.596 1.00 30.56 N
ATOM 20 C5 C B 5 58.217 8.861 19.619 1.00 36.49 C
ATOM 21 C6 C B 5 59.248 8.003 19.576 1.00 38.75 C
ATOM 22 P U B 6 65.314 5.645 19.273 1.00 59.51 P
ATOM 23 OP1 U B 6 64.508 5.419 18.046 1.00 58.54 O
ATOM 24 OP2 U B 6 66.102 4.525 19.841 1.00 61.07 O
ATOM 25 O5' U B 6 66.282 6.891 19.036 1.00 60.65 O
TER
Atoms:
OP1: (53.822,15.519,25.850)
OP2: (55.498,13.576,26.008)
C3': (55.098,14.537,20.951)
C1': (57.470,14.549,20.822)
C5': (55.063,15.979,23.078)
O6: (60.600,9.714,22.478)
O4': (57.073,15.468,21.826)
C8: (57.640,12.806,22.660)
C2: (60.765,11.947,19.718)
C6: (60.300,10.672,21.764)
C5: (59.271,11.631,21.960)
C4: (59.104,12.629,21.024)
P: (55.132,14.915,25.480)
C4': (55.650,15.740,21.705)
C2': (56.233,14.231,19.972)
O2': (56.211,15.078,18.836)
N1: (61.011,10.915,20.592)
N2: (61.557,12.011,18.634)
N3: (59.808,12.849,19.892)
N7: (58.342,11.756,22.985)
N9: (58.047,13.380,21.477)
O5': (55.216,14.818,23.889)
O3': (53.914,14.918,20.252)
OP2: (55.498,13.576,26.008)
C3': (55.098,14.537,20.951)
C1': (57.470,14.549,20.822)
C5': (55.063,15.979,23.078)
O6: (60.600,9.714,22.478)
O4': (57.073,15.468,21.826)
C8: (57.640,12.806,22.660)
C2: (60.765,11.947,19.718)
C6: (60.300,10.672,21.764)
C5: (59.271,11.631,21.960)
C4: (59.104,12.629,21.024)
P: (55.132,14.915,25.480)
C4': (55.650,15.740,21.705)
C2': (56.233,14.231,19.972)
O2': (56.211,15.078,18.836)
N1: (61.011,10.915,20.592)
N2: (61.557,12.011,18.634)
N3: (59.808,12.849,19.892)
N7: (58.342,11.756,22.985)
N9: (58.047,13.380,21.477)
O5': (55.216,14.818,23.889)
O3': (53.914,14.918,20.252)
C2: (60.091,9.070,17.595)
OP1: (60.564,3.747,23.833)
OP2: (59.084,5.845,23.878)
C4: (58.143,9.857,18.599)
O5': (60.074,5.032,21.755)
C3': (63.028,6.595,20.142)
C1': (61.336,7.152,18.559)
O4': (60.953,5.956,19.224)
C5': (61.118,5.953,21.614)
P: (59.546,4.616,23.189)
O2: (60.956,9.120,16.708)
C4': (61.847,5.680,20.337)
C2': (62.591,7.732,19.225)
O2': (63.544,8.016,18.219)
N1: (60.192,8.084,18.591)
N3: (59.055,9.941,17.627)
N4: (57.142,10.743,18.596)
C6: (59.248,8.003,19.576)
C5: (58.217,8.861,19.619)
O3': (64.342,6.144,20.447)
OP1: (60.564,3.747,23.833)
OP2: (59.084,5.845,23.878)
C4: (58.143,9.857,18.599)
O5': (60.074,5.032,21.755)
C3': (63.028,6.595,20.142)
C1': (61.336,7.152,18.559)
O4': (60.953,5.956,19.224)
C5': (61.118,5.953,21.614)
P: (59.546,4.616,23.189)
O2: (60.956,9.120,16.708)
C4': (61.847,5.680,20.337)
C2': (62.591,7.732,19.225)
O2': (63.544,8.016,18.219)
N1: (60.192,8.084,18.591)
N3: (59.055,9.941,17.627)
N4: (57.142,10.743,18.596)
C6: (59.248,8.003,19.576)
C5: (58.217,8.861,19.619)
O3': (64.342,6.144,20.447)
Image (generated by PyMOL):