Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01036:01039
Extra
PDB:
ATOM 1 O3' G A1035 26.545 104.190 112.439 1.00 47.00 O
ATOM 2 P G A1036 27.466 105.401 112.965 1.00 48.82 P
ATOM 3 OP1 G A1036 27.083 105.657 114.380 1.00 49.18 O
ATOM 4 OP2 G A1036 27.456 106.519 111.982 1.00 47.47 O
ATOM 5 O5' G A1036 28.936 104.805 112.964 1.00 47.75 O
ATOM 6 C5' G A1036 29.345 103.886 113.962 1.00 47.55 C
ATOM 7 C4' G A1036 30.781 103.522 113.751 1.00 48.81 C
ATOM 8 O4' G A1036 30.940 102.979 112.414 1.00 48.35 O
ATOM 9 C3' G A1036 31.779 104.666 113.799 1.00 49.11 C
ATOM 10 O3' G A1036 32.062 104.988 115.169 1.00 48.42 O
ATOM 11 C2' G A1036 32.961 104.052 113.054 1.00 51.16 C
ATOM 12 O2' G A1036 33.681 103.145 113.872 1.00 54.48 O
ATOM 13 C1' G A1036 32.248 103.248 111.953 1.00 50.27 C
ATOM 14 N9 G A1036 32.161 103.916 110.655 1.00 50.42 N
ATOM 15 C8 G A1036 31.157 104.746 110.213 1.00 50.54 C
ATOM 16 N7 G A1036 31.379 105.229 109.020 1.00 49.77 N
ATOM 17 C5 G A1036 32.599 104.677 108.645 1.00 50.75 C
ATOM 18 C6 G A1036 33.361 104.844 107.452 1.00 51.34 C
ATOM 19 O6 G A1036 33.099 105.543 106.461 1.00 54.19 O
ATOM 20 N1 G A1036 34.537 104.096 107.483 1.00 48.89 N
ATOM 21 C2 G A1036 34.932 103.296 108.522 1.00 48.35 C
ATOM 22 N2 G A1036 36.095 102.657 108.361 1.00 47.43 N
ATOM 23 N3 G A1036 34.236 103.133 109.639 1.00 49.06 N
ATOM 24 C4 G A1036 33.089 103.852 109.634 1.00 50.22 C
ATOM 25 P A A1037 32.921 106.307 115.558 1.00 49.40 P
ATOM 26 OP1 A A1037 34.371 105.983 115.429 1.00 47.99 O
ATOM 27 OP2 A A1037 32.382 106.766 116.867 1.00 47.25 O
ATOM 28 O5' A A1037 32.575 107.422 114.473 1.00 46.22 O
TER
ATOM 1 O3' A B1038 34.639 111.425 106.530 1.00 44.86 O
ATOM 2 P C B1039 34.529 110.316 105.371 1.00 46.48 P
ATOM 3 OP1 C B1039 34.518 111.069 104.096 1.00 44.81 O
ATOM 4 OP2 C B1039 33.441 109.340 105.662 1.00 46.54 O
ATOM 5 O5' C B1039 35.896 109.514 105.479 1.00 50.01 O
ATOM 6 C5' C B1039 36.951 109.699 104.532 1.00 51.68 C
ATOM 7 C4' C B1039 38.042 108.709 104.812 1.00 54.60 C
ATOM 8 O4' C B1039 38.445 108.878 106.199 1.00 56.46 O
ATOM 9 C3' C B1039 37.633 107.241 104.775 1.00 56.57 C
ATOM 10 O3' C B1039 37.573 106.584 103.510 1.00 57.95 O
ATOM 11 C2' C B1039 38.759 106.633 105.594 1.00 58.69 C
ATOM 12 O2' C B1039 40.006 106.668 104.916 1.00 59.61 O
ATOM 13 C1' C B1039 38.815 107.619 106.751 1.00 57.43 C
ATOM 14 N1 C B1039 37.827 107.219 107.778 1.00 57.91 N
ATOM 15 C2 C B1039 38.250 106.396 108.835 1.00 58.51 C
ATOM 16 O2 C B1039 39.444 106.043 108.886 1.00 58.91 O
ATOM 17 N3 C B1039 37.346 106.007 109.770 1.00 57.44 N
ATOM 18 C4 C B1039 36.075 106.410 109.680 1.00 56.99 C
ATOM 19 N4 C B1039 35.220 106.015 110.629 1.00 56.49 N
ATOM 20 C5 C B1039 35.623 107.242 108.618 1.00 57.72 C
ATOM 21 C6 C B1039 36.521 107.622 107.700 1.00 57.65 C
ATOM 22 P A B1040 38.106 107.305 102.180 1.00 59.59 P
ATOM 23 OP1 A B1040 39.324 108.096 102.517 1.00 60.13 O
ATOM 24 OP2 A B1040 36.966 107.961 101.482 1.00 58.87 O
ATOM 25 O5' A B1040 38.593 106.079 101.294 1.00 55.49 O
TER
ATOM 2 P G A1036 27.466 105.401 112.965 1.00 48.82 P
ATOM 3 OP1 G A1036 27.083 105.657 114.380 1.00 49.18 O
ATOM 4 OP2 G A1036 27.456 106.519 111.982 1.00 47.47 O
ATOM 5 O5' G A1036 28.936 104.805 112.964 1.00 47.75 O
ATOM 6 C5' G A1036 29.345 103.886 113.962 1.00 47.55 C
ATOM 7 C4' G A1036 30.781 103.522 113.751 1.00 48.81 C
ATOM 8 O4' G A1036 30.940 102.979 112.414 1.00 48.35 O
ATOM 9 C3' G A1036 31.779 104.666 113.799 1.00 49.11 C
ATOM 10 O3' G A1036 32.062 104.988 115.169 1.00 48.42 O
ATOM 11 C2' G A1036 32.961 104.052 113.054 1.00 51.16 C
ATOM 12 O2' G A1036 33.681 103.145 113.872 1.00 54.48 O
ATOM 13 C1' G A1036 32.248 103.248 111.953 1.00 50.27 C
ATOM 14 N9 G A1036 32.161 103.916 110.655 1.00 50.42 N
ATOM 15 C8 G A1036 31.157 104.746 110.213 1.00 50.54 C
ATOM 16 N7 G A1036 31.379 105.229 109.020 1.00 49.77 N
ATOM 17 C5 G A1036 32.599 104.677 108.645 1.00 50.75 C
ATOM 18 C6 G A1036 33.361 104.844 107.452 1.00 51.34 C
ATOM 19 O6 G A1036 33.099 105.543 106.461 1.00 54.19 O
ATOM 20 N1 G A1036 34.537 104.096 107.483 1.00 48.89 N
ATOM 21 C2 G A1036 34.932 103.296 108.522 1.00 48.35 C
ATOM 22 N2 G A1036 36.095 102.657 108.361 1.00 47.43 N
ATOM 23 N3 G A1036 34.236 103.133 109.639 1.00 49.06 N
ATOM 24 C4 G A1036 33.089 103.852 109.634 1.00 50.22 C
ATOM 25 P A A1037 32.921 106.307 115.558 1.00 49.40 P
ATOM 26 OP1 A A1037 34.371 105.983 115.429 1.00 47.99 O
ATOM 27 OP2 A A1037 32.382 106.766 116.867 1.00 47.25 O
ATOM 28 O5' A A1037 32.575 107.422 114.473 1.00 46.22 O
TER
ATOM 1 O3' A B1038 34.639 111.425 106.530 1.00 44.86 O
ATOM 2 P C B1039 34.529 110.316 105.371 1.00 46.48 P
ATOM 3 OP1 C B1039 34.518 111.069 104.096 1.00 44.81 O
ATOM 4 OP2 C B1039 33.441 109.340 105.662 1.00 46.54 O
ATOM 5 O5' C B1039 35.896 109.514 105.479 1.00 50.01 O
ATOM 6 C5' C B1039 36.951 109.699 104.532 1.00 51.68 C
ATOM 7 C4' C B1039 38.042 108.709 104.812 1.00 54.60 C
ATOM 8 O4' C B1039 38.445 108.878 106.199 1.00 56.46 O
ATOM 9 C3' C B1039 37.633 107.241 104.775 1.00 56.57 C
ATOM 10 O3' C B1039 37.573 106.584 103.510 1.00 57.95 O
ATOM 11 C2' C B1039 38.759 106.633 105.594 1.00 58.69 C
ATOM 12 O2' C B1039 40.006 106.668 104.916 1.00 59.61 O
ATOM 13 C1' C B1039 38.815 107.619 106.751 1.00 57.43 C
ATOM 14 N1 C B1039 37.827 107.219 107.778 1.00 57.91 N
ATOM 15 C2 C B1039 38.250 106.396 108.835 1.00 58.51 C
ATOM 16 O2 C B1039 39.444 106.043 108.886 1.00 58.91 O
ATOM 17 N3 C B1039 37.346 106.007 109.770 1.00 57.44 N
ATOM 18 C4 C B1039 36.075 106.410 109.680 1.00 56.99 C
ATOM 19 N4 C B1039 35.220 106.015 110.629 1.00 56.49 N
ATOM 20 C5 C B1039 35.623 107.242 108.618 1.00 57.72 C
ATOM 21 C6 C B1039 36.521 107.622 107.700 1.00 57.65 C
ATOM 22 P A B1040 38.106 107.305 102.180 1.00 59.59 P
ATOM 23 OP1 A B1040 39.324 108.096 102.517 1.00 60.13 O
ATOM 24 OP2 A B1040 36.966 107.961 101.482 1.00 58.87 O
ATOM 25 O5' A B1040 38.593 106.079 101.294 1.00 55.49 O
TER
Atoms:
OP1: (27.083,105.657,114.380)
OP2: (27.456,106.519,111.982)
C3': (31.779,104.666,113.799)
C1': (32.248,103.248,111.953)
C5': (29.345,103.886,113.962)
O6: (33.099,105.543,106.461)
O4': (30.940,102.979,112.414)
C8: (31.157,104.746,110.213)
C2: (34.932,103.296,108.522)
C6: (33.361,104.844,107.452)
C5: (32.599,104.677,108.645)
C4: (33.089,103.852,109.634)
P: (27.466,105.401,112.965)
C4': (30.781,103.522,113.751)
C2': (32.961,104.052,113.054)
O2': (33.681,103.145,113.872)
N1: (34.537,104.096,107.483)
N2: (36.095,102.657,108.361)
N3: (34.236,103.133,109.639)
N7: (31.379,105.229,109.020)
N9: (32.161,103.916,110.655)
O5': (28.936,104.805,112.964)
O3': (32.062,104.988,115.169)
OP2: (27.456,106.519,111.982)
C3': (31.779,104.666,113.799)
C1': (32.248,103.248,111.953)
C5': (29.345,103.886,113.962)
O6: (33.099,105.543,106.461)
O4': (30.940,102.979,112.414)
C8: (31.157,104.746,110.213)
C2: (34.932,103.296,108.522)
C6: (33.361,104.844,107.452)
C5: (32.599,104.677,108.645)
C4: (33.089,103.852,109.634)
P: (27.466,105.401,112.965)
C4': (30.781,103.522,113.751)
C2': (32.961,104.052,113.054)
O2': (33.681,103.145,113.872)
N1: (34.537,104.096,107.483)
N2: (36.095,102.657,108.361)
N3: (34.236,103.133,109.639)
N7: (31.379,105.229,109.020)
N9: (32.161,103.916,110.655)
O5': (28.936,104.805,112.964)
O3': (32.062,104.988,115.169)
C2: (38.250,106.396,108.835)
OP1: (34.518,111.069,104.096)
OP2: (33.441,109.340,105.662)
C4: (36.075,106.410,109.680)
O5': (35.896,109.514,105.479)
C3': (37.633,107.241,104.775)
C1': (38.815,107.619,106.751)
O4': (38.445,108.878,106.199)
C5': (36.951,109.699,104.532)
P: (34.529,110.316,105.371)
O2: (39.444,106.043,108.886)
C4': (38.042,108.709,104.812)
C2': (38.759,106.633,105.594)
O2': (40.006,106.668,104.916)
N1: (37.827,107.219,107.778)
N3: (37.346,106.007,109.770)
N4: (35.220,106.015,110.629)
C6: (36.521,107.622,107.700)
C5: (35.623,107.242,108.618)
O3': (37.573,106.584,103.510)
OP1: (34.518,111.069,104.096)
OP2: (33.441,109.340,105.662)
C4: (36.075,106.410,109.680)
O5': (35.896,109.514,105.479)
C3': (37.633,107.241,104.775)
C1': (38.815,107.619,106.751)
O4': (38.445,108.878,106.199)
C5': (36.951,109.699,104.532)
P: (34.529,110.316,105.371)
O2: (39.444,106.043,108.886)
C4': (38.042,108.709,104.812)
C2': (38.759,106.633,105.594)
O2': (40.006,106.668,104.916)
N1: (37.827,107.219,107.778)
N3: (37.346,106.007,109.770)
N4: (35.220,106.015,110.629)
C6: (36.521,107.622,107.700)
C5: (35.623,107.242,108.618)
O3': (37.573,106.584,103.510)
Image (generated by PyMOL):