Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:B41:B39
Extra
PDB:
ATOM 1 O3' C A 40 94.229 23.298 92.672 1.00 89.31 O
ATOM 2 P C A 41 93.054 22.234 92.398 1.00 90.30 P
ATOM 3 OP1 C A 41 93.550 21.252 91.395 1.00 90.41 O
ATOM 4 OP2 C A 41 91.808 22.997 92.128 1.00 90.45 O
ATOM 5 O5' C A 41 92.914 21.463 93.788 1.00 90.98 O
ATOM 6 C5' C A 41 91.732 20.712 94.114 1.00 90.98 C
ATOM 7 C4' C A 41 91.639 20.479 95.611 1.00 92.05 C
ATOM 8 O4' C A 41 91.861 21.721 96.333 1.00 93.64 O
ATOM 9 C3' C A 41 90.254 20.032 96.044 1.00 92.31 C
ATOM 10 O3' C A 41 90.080 18.632 95.895 1.00 90.50 O
ATOM 11 C2' C A 41 90.164 20.506 97.487 1.00 93.92 C
ATOM 12 O2' C A 41 90.740 19.616 98.428 1.00 95.85 O
ATOM 13 C1' C A 41 90.945 21.823 97.419 1.00 95.11 C
ATOM 14 N1 C A 41 90.091 23.009 97.189 1.00 97.08 N
ATOM 15 C2 C A 41 89.064 23.324 98.117 1.00 97.92 C
ATOM 16 O2 C A 41 88.871 22.576 99.088 1.00 98.66 O
ATOM 17 N3 C A 41 88.315 24.434 97.917 1.00 98.46 N
ATOM 18 C4 C A 41 88.542 25.206 96.848 1.00 98.73 C
ATOM 19 N4 C A 41 87.791 26.301 96.697 1.00 98.90 N
ATOM 20 C5 C A 41 89.554 24.894 95.885 1.00 98.08 C
ATOM 21 C6 C A 41 90.295 23.804 96.094 1.00 97.70 C
ATOM 22 P G A 42 89.346 18.071 94.584 1.00 89.46 P
ATOM 23 OP1 G A 42 89.213 16.598 94.679 1.00 90.09 O
ATOM 24 OP2 G A 42 89.993 18.672 93.382 1.00 88.50 O
ATOM 25 O5' G A 42 87.881 18.654 94.717 1.00 87.53 O
TER
ATOM 1 O3' U B 38 88.315 28.167 91.939 1.00 88.33 O
ATOM 2 P C B 39 89.409 28.879 92.882 1.00 88.89 P
ATOM 3 OP1 C B 39 89.664 28.018 94.055 1.00 89.67 O
ATOM 4 OP2 C B 39 88.943 30.272 93.087 1.00 88.93 O
ATOM 5 O5' C B 39 90.726 28.950 92.001 1.00 88.43 O
ATOM 6 C5' C B 39 90.638 29.055 90.589 1.00 87.00 C
ATOM 7 C4' C B 39 91.835 29.783 90.044 1.00 86.43 C
ATOM 8 O4' C B 39 91.899 31.143 90.544 1.00 85.54 O
ATOM 9 C3' C B 39 93.210 29.300 90.462 1.00 86.54 C
ATOM 10 O3' C B 39 93.567 28.070 89.844 1.00 87.62 O
ATOM 11 C2' C B 39 94.070 30.440 89.927 1.00 85.65 C
ATOM 12 O2' C B 39 94.186 30.323 88.524 1.00 84.40 O
ATOM 13 C1' C B 39 93.187 31.655 90.232 1.00 84.68 C
ATOM 14 N1 C B 39 93.684 32.556 91.303 1.00 83.85 N
ATOM 15 C2 C B 39 94.564 33.601 90.940 1.00 83.07 C
ATOM 16 O2 C B 39 94.927 33.701 89.757 1.00 82.61 O
ATOM 17 N3 C B 39 94.999 34.464 91.886 1.00 82.30 N
ATOM 18 C4 C B 39 94.609 34.321 93.151 1.00 82.40 C
ATOM 19 N4 C B 39 95.049 35.212 94.040 1.00 81.44 N
ATOM 20 C5 C B 39 93.745 33.259 93.559 1.00 83.55 C
ATOM 21 C6 C B 39 93.308 32.404 92.610 1.00 83.63 C
ATOM 22 P C B 40 94.946 27.342 90.254 1.00 88.04 P
ATOM 23 OP1 C B 40 96.038 28.362 90.309 1.00 87.15 O
ATOM 24 OP2 C B 40 95.086 26.180 89.338 1.00 87.58 O
ATOM 25 O5' C B 40 94.700 26.793 91.741 1.00 88.47 O
TER
ATOM 2 P C A 41 93.054 22.234 92.398 1.00 90.30 P
ATOM 3 OP1 C A 41 93.550 21.252 91.395 1.00 90.41 O
ATOM 4 OP2 C A 41 91.808 22.997 92.128 1.00 90.45 O
ATOM 5 O5' C A 41 92.914 21.463 93.788 1.00 90.98 O
ATOM 6 C5' C A 41 91.732 20.712 94.114 1.00 90.98 C
ATOM 7 C4' C A 41 91.639 20.479 95.611 1.00 92.05 C
ATOM 8 O4' C A 41 91.861 21.721 96.333 1.00 93.64 O
ATOM 9 C3' C A 41 90.254 20.032 96.044 1.00 92.31 C
ATOM 10 O3' C A 41 90.080 18.632 95.895 1.00 90.50 O
ATOM 11 C2' C A 41 90.164 20.506 97.487 1.00 93.92 C
ATOM 12 O2' C A 41 90.740 19.616 98.428 1.00 95.85 O
ATOM 13 C1' C A 41 90.945 21.823 97.419 1.00 95.11 C
ATOM 14 N1 C A 41 90.091 23.009 97.189 1.00 97.08 N
ATOM 15 C2 C A 41 89.064 23.324 98.117 1.00 97.92 C
ATOM 16 O2 C A 41 88.871 22.576 99.088 1.00 98.66 O
ATOM 17 N3 C A 41 88.315 24.434 97.917 1.00 98.46 N
ATOM 18 C4 C A 41 88.542 25.206 96.848 1.00 98.73 C
ATOM 19 N4 C A 41 87.791 26.301 96.697 1.00 98.90 N
ATOM 20 C5 C A 41 89.554 24.894 95.885 1.00 98.08 C
ATOM 21 C6 C A 41 90.295 23.804 96.094 1.00 97.70 C
ATOM 22 P G A 42 89.346 18.071 94.584 1.00 89.46 P
ATOM 23 OP1 G A 42 89.213 16.598 94.679 1.00 90.09 O
ATOM 24 OP2 G A 42 89.993 18.672 93.382 1.00 88.50 O
ATOM 25 O5' G A 42 87.881 18.654 94.717 1.00 87.53 O
TER
ATOM 1 O3' U B 38 88.315 28.167 91.939 1.00 88.33 O
ATOM 2 P C B 39 89.409 28.879 92.882 1.00 88.89 P
ATOM 3 OP1 C B 39 89.664 28.018 94.055 1.00 89.67 O
ATOM 4 OP2 C B 39 88.943 30.272 93.087 1.00 88.93 O
ATOM 5 O5' C B 39 90.726 28.950 92.001 1.00 88.43 O
ATOM 6 C5' C B 39 90.638 29.055 90.589 1.00 87.00 C
ATOM 7 C4' C B 39 91.835 29.783 90.044 1.00 86.43 C
ATOM 8 O4' C B 39 91.899 31.143 90.544 1.00 85.54 O
ATOM 9 C3' C B 39 93.210 29.300 90.462 1.00 86.54 C
ATOM 10 O3' C B 39 93.567 28.070 89.844 1.00 87.62 O
ATOM 11 C2' C B 39 94.070 30.440 89.927 1.00 85.65 C
ATOM 12 O2' C B 39 94.186 30.323 88.524 1.00 84.40 O
ATOM 13 C1' C B 39 93.187 31.655 90.232 1.00 84.68 C
ATOM 14 N1 C B 39 93.684 32.556 91.303 1.00 83.85 N
ATOM 15 C2 C B 39 94.564 33.601 90.940 1.00 83.07 C
ATOM 16 O2 C B 39 94.927 33.701 89.757 1.00 82.61 O
ATOM 17 N3 C B 39 94.999 34.464 91.886 1.00 82.30 N
ATOM 18 C4 C B 39 94.609 34.321 93.151 1.00 82.40 C
ATOM 19 N4 C B 39 95.049 35.212 94.040 1.00 81.44 N
ATOM 20 C5 C B 39 93.745 33.259 93.559 1.00 83.55 C
ATOM 21 C6 C B 39 93.308 32.404 92.610 1.00 83.63 C
ATOM 22 P C B 40 94.946 27.342 90.254 1.00 88.04 P
ATOM 23 OP1 C B 40 96.038 28.362 90.309 1.00 87.15 O
ATOM 24 OP2 C B 40 95.086 26.180 89.338 1.00 87.58 O
ATOM 25 O5' C B 40 94.700 26.793 91.741 1.00 88.47 O
TER
Atoms:
C2: (89.064,23.324,98.117)
OP1: (93.550,21.252,91.395)
OP2: (91.808,22.997,92.128)
C4: (88.542,25.206,96.848)
O5': (92.914,21.463,93.788)
C3': (90.254,20.032,96.044)
C1': (90.945,21.823,97.419)
O4': (91.861,21.721,96.333)
C5': (91.732,20.712,94.114)
P: (93.054,22.234,92.398)
O2: (88.871,22.576,99.088)
C4': (91.639,20.479,95.611)
C2': (90.164,20.506,97.487)
O2': (90.740,19.616,98.428)
N1: (90.091,23.009,97.189)
N3: (88.315,24.434,97.917)
N4: (87.791,26.301,96.697)
C6: (90.295,23.804,96.094)
C5: (89.554,24.894,95.885)
O3': (90.080,18.632,95.895)
OP1: (93.550,21.252,91.395)
OP2: (91.808,22.997,92.128)
C4: (88.542,25.206,96.848)
O5': (92.914,21.463,93.788)
C3': (90.254,20.032,96.044)
C1': (90.945,21.823,97.419)
O4': (91.861,21.721,96.333)
C5': (91.732,20.712,94.114)
P: (93.054,22.234,92.398)
O2: (88.871,22.576,99.088)
C4': (91.639,20.479,95.611)
C2': (90.164,20.506,97.487)
O2': (90.740,19.616,98.428)
N1: (90.091,23.009,97.189)
N3: (88.315,24.434,97.917)
N4: (87.791,26.301,96.697)
C6: (90.295,23.804,96.094)
C5: (89.554,24.894,95.885)
O3': (90.080,18.632,95.895)
C2: (94.564,33.601,90.940)
OP1: (89.664,28.018,94.055)
OP2: (88.943,30.272,93.087)
C4: (94.609,34.321,93.151)
O5': (90.726,28.950,92.001)
C3': (93.210,29.300,90.462)
C1': (93.187,31.655,90.232)
O4': (91.899,31.143,90.544)
C5': (90.638,29.055,90.589)
P: (89.409,28.879,92.882)
O2: (94.927,33.701,89.757)
C4': (91.835,29.783,90.044)
C2': (94.070,30.440,89.927)
O2': (94.186,30.323,88.524)
N1: (93.684,32.556,91.303)
N3: (94.999,34.464,91.886)
N4: (95.049,35.212,94.040)
C6: (93.308,32.404,92.610)
C5: (93.745,33.259,93.559)
O3': (93.567,28.070,89.844)
OP1: (89.664,28.018,94.055)
OP2: (88.943,30.272,93.087)
C4: (94.609,34.321,93.151)
O5': (90.726,28.950,92.001)
C3': (93.210,29.300,90.462)
C1': (93.187,31.655,90.232)
O4': (91.899,31.143,90.544)
C5': (90.638,29.055,90.589)
P: (89.409,28.879,92.882)
O2: (94.927,33.701,89.757)
C4': (91.835,29.783,90.044)
C2': (94.070,30.440,89.927)
O2': (94.186,30.323,88.524)
N1: (93.684,32.556,91.303)
N3: (94.999,34.464,91.886)
N4: (95.049,35.212,94.040)
C6: (93.308,32.404,92.610)
C5: (93.745,33.259,93.559)
O3': (93.567,28.070,89.844)
Image (generated by PyMOL):