ClaRNA

Doublet info:

Details

Nucleotide types: CC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1SJ4:R24:R22

Extra

PDB:
ATOM 1 O3' U A 23 40.341 82.715 85.737 1.00105.33 O
ATOM 2 P C A 24 38.855 83.047 86.226 1.00106.12 P
ATOM 3 OP1 C A 24 38.285 84.092 85.337 1.00106.36 O
ATOM 4 OP2 C A 24 38.913 83.281 87.687 1.00107.57 O
ATOM 5 O5' C A 24 38.059 81.692 85.993 1.00106.60 O
ATOM 6 C5' C A 24 37.270 81.144 87.032 1.00106.55 C
ATOM 7 C4' C A 24 36.095 82.044 87.306 1.00106.77 C
ATOM 8 O4' C A 24 35.338 82.220 86.080 1.00105.21 O
ATOM 9 C3' C A 24 35.127 81.525 88.358 1.00108.04 C
ATOM 10 O3' C A 24 34.667 82.622 89.141 1.00112.16 O
ATOM 11 C2' C A 24 34.001 80.910 87.528 1.00106.10 C
ATOM 12 O2' C A 24 32.745 80.943 88.178 1.00104.54 O
ATOM 13 C1' C A 24 34.006 81.783 86.271 1.00104.41 C
ATOM 14 N1 C A 24 33.593 81.046 85.060 1.00101.60 N
ATOM 15 C2 C A 24 32.277 80.571 84.968 1.00100.13 C
ATOM 16 O2 C A 24 31.496 80.790 85.898 1.00 99.86 O
ATOM 17 N3 C A 24 31.894 79.887 83.865 1.00 99.04 N
ATOM 18 C4 C A 24 32.767 79.672 82.878 1.00 98.83 C
ATOM 19 N4 C A 24 32.344 78.992 81.809 1.00 96.98 N
ATOM 20 C5 C A 24 34.114 80.146 82.943 1.00 98.79 C
ATOM 21 C6 C A 24 34.479 80.822 84.041 1.00100.14 C
ATOM 22 P G A 25 35.406 82.978 90.528 1.00114.92 P
ATOM 23 OP1 G A 25 36.873 83.012 90.287 1.00114.25 O
ATOM 24 OP2 G A 25 34.853 82.081 91.578 1.00114.26 O
ATOM 25 O5' G A 25 34.922 84.461 90.836 1.00116.69 O
TER

ATOM 1 O3' C B 21 36.706 77.059 78.860 1.00 70.61 O
ATOM 2 P C B 22 37.089 78.593 79.141 1.00 70.55 P
ATOM 3 OP1 C B 22 36.345 78.971 80.365 1.00 70.22 O
ATOM 4 OP2 C B 22 36.887 79.369 77.894 1.00 71.60 O
ATOM 5 O5' C B 22 38.656 78.559 79.447 1.00 72.67 O
ATOM 6 C5' C B 22 39.439 79.738 79.315 1.00 76.62 C
ATOM 7 C4' C B 22 40.887 79.392 79.097 1.00 79.32 C
ATOM 8 O4' C B 22 40.979 78.330 78.125 1.00 78.68 O
ATOM 9 C3' C B 22 41.715 80.528 78.513 1.00 83.60 C
ATOM 10 O3' C B 22 42.239 81.370 79.525 1.00 90.42 O
ATOM 11 C2' C B 22 42.832 79.802 77.779 1.00 82.18 C
ATOM 12 O2' C B 22 43.915 79.466 78.627 1.00 84.01 O
ATOM 13 C1' C B 22 42.121 78.532 77.314 1.00 79.00 C
ATOM 14 N1 C B 22 41.701 78.572 75.909 1.00 76.32 N
ATOM 15 C2 C B 22 42.684 78.500 74.924 1.00 76.31 C
ATOM 16 O2 C B 22 43.878 78.468 75.274 1.00 75.77 O
ATOM 17 N3 C B 22 42.317 78.468 73.622 1.00 74.15 N
ATOM 18 C4 C B 22 41.030 78.519 73.294 1.00 73.32 C
ATOM 19 N4 C B 22 40.722 78.474 72.001 1.00 74.31 N
ATOM 20 C5 C B 22 40.004 78.620 74.277 1.00 74.37 C
ATOM 21 C6 C B 22 40.381 78.649 75.562 1.00 75.60 C
ATOM 22 P U B 23 41.306 82.499 80.172 1.00 95.84 P
ATOM 23 OP1 U B 23 40.204 82.793 79.211 1.00 96.30 O
ATOM 24 OP2 U B 23 42.193 83.600 80.633 1.00 96.52 O
ATOM 25 O5' U B 23 40.666 81.759 81.426 1.00 97.83 O
TER

Atoms:
C2: (32.277,80.571,84.968)
OP1: (38.285,84.092,85.337)
OP2: (38.913,83.281,87.687)
C4: (32.767,79.672,82.878)
O5': (38.059,81.692,85.993)
C3': (35.127,81.525,88.358)
C1': (34.006,81.783,86.271)
O4': (35.338,82.220,86.080)
C5': (37.270,81.144,87.032)
P: (38.855,83.047,86.226)
O2: (31.496,80.790,85.898)
C4': (36.095,82.044,87.306)
C2': (34.001,80.910,87.528)
O2': (32.745,80.943,88.178)
N1: (33.593,81.046,85.060)
N3: (31.894,79.887,83.865)
N4: (32.344,78.992,81.809)
C6: (34.479,80.822,84.041)
C5: (34.114,80.146,82.943)
O3': (34.667,82.622,89.141)
C2: (42.684,78.500,74.924)
OP1: (36.345,78.971,80.365)
OP2: (36.887,79.369,77.894)
C4: (41.030,78.519,73.294)
O5': (38.656,78.559,79.447)
C3': (41.715,80.528,78.513)
C1': (42.121,78.532,77.314)
O4': (40.979,78.330,78.125)
C5': (39.439,79.738,79.315)
P: (37.089,78.593,79.141)
O2: (43.878,78.468,75.274)
C4': (40.887,79.392,79.097)
C2': (42.832,79.802,77.779)
O2': (43.915,79.466,78.627)
N1: (41.701,78.572,75.909)
N3: (42.317,78.468,73.622)
N4: (40.722,78.474,72.001)
C6: (40.381,78.649,75.562)
C5: (40.004,78.620,74.277)
O3': (42.239,81.370,79.525)
Image (generated by PyMOL):
PyMOL image
show in jmol