Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1SJF:B25:B23
Extra
PDB:
ATOM 1 O3' U A 24 40.064 82.146 84.360 1.00124.11 O
ATOM 2 P C A 25 38.673 82.575 85.034 1.00126.96 P
ATOM 3 OP1 C A 25 37.870 83.315 84.026 1.00127.17 O
ATOM 4 OP2 C A 25 38.988 83.221 86.336 1.00127.29 O
ATOM 5 O5' C A 25 37.943 81.193 85.332 1.00127.76 O
ATOM 6 C5' C A 25 37.316 80.965 86.584 1.00128.05 C
ATOM 7 C4' C A 25 36.267 82.017 86.831 1.00128.46 C
ATOM 8 O4' C A 25 35.502 82.217 85.618 1.00126.96 O
ATOM 9 C3' C A 25 35.281 81.664 87.932 1.00129.75 C
ATOM 10 O3' C A 25 34.917 82.853 88.635 1.00132.82 O
ATOM 11 C2' C A 25 34.096 81.093 87.153 1.00128.45 C
ATOM 12 O2' C A 25 32.864 81.281 87.823 1.00128.13 O
ATOM 13 C1' C A 25 34.150 81.885 85.842 1.00126.91 C
ATOM 14 N1 C A 25 33.695 81.135 84.656 1.00125.30 N
ATOM 15 C2 C A 25 32.475 80.442 84.696 1.00124.71 C
ATOM 16 O2 C A 25 31.791 80.482 85.725 1.00124.98 O
ATOM 17 N3 C A 25 32.076 79.746 83.604 1.00124.15 N
ATOM 18 C4 C A 25 32.840 79.726 82.509 1.00123.98 C
ATOM 19 N4 C A 25 32.410 79.020 81.460 1.00123.38 N
ATOM 20 C5 C A 25 34.080 80.427 82.441 1.00124.03 C
ATOM 21 C6 C A 25 34.464 81.112 83.526 1.00124.64 C
ATOM 22 P G A 26 35.659 83.228 90.015 1.00134.33 P
ATOM 23 OP1 G A 26 37.124 83.200 89.780 1.00134.32 O
ATOM 24 OP2 G A 26 35.069 82.374 91.075 1.00134.35 O
ATOM 25 O5' G A 26 35.226 84.740 90.284 1.00136.47 O
TER
ATOM 1 O3' C B 22 36.301 77.159 78.407 1.00 88.55 O
ATOM 2 P C B 23 36.906 78.618 78.688 1.00 91.09 P
ATOM 3 OP1 C B 23 36.567 78.989 80.086 1.00 90.96 O
ATOM 4 OP2 C B 23 36.512 79.517 77.575 1.00 90.53 O
ATOM 5 O5' C B 23 38.472 78.367 78.590 1.00 92.43 O
ATOM 6 C5' C B 23 39.363 79.447 78.405 1.00 95.14 C
ATOM 7 C4' C B 23 40.767 78.938 78.258 1.00 96.20 C
ATOM 8 O4' C B 23 40.798 77.939 77.220 1.00 94.60 O
ATOM 9 C3' C B 23 41.747 79.999 77.803 1.00 98.84 C
ATOM 10 O3' C B 23 42.272 80.693 78.911 1.00104.10 O
ATOM 11 C2' C B 23 42.817 79.202 77.081 1.00 97.08 C
ATOM 12 O2' C B 23 43.785 78.683 77.964 1.00 98.45 O
ATOM 13 C1' C B 23 41.998 78.061 76.484 1.00 94.22 C
ATOM 14 N1 C B 23 41.655 78.246 75.070 1.00 90.61 N
ATOM 15 C2 C B 23 42.684 78.238 74.129 1.00 89.85 C
ATOM 16 O2 C B 23 43.857 78.156 74.522 1.00 89.67 O
ATOM 17 N3 C B 23 42.377 78.322 72.820 1.00 88.30 N
ATOM 18 C4 C B 23 41.107 78.432 72.441 1.00 87.98 C
ATOM 19 N4 C B 23 40.854 78.505 71.137 1.00 87.94 N
ATOM 20 C5 C B 23 40.039 78.476 73.382 1.00 87.83 C
ATOM 21 C6 C B 23 40.356 78.387 74.675 1.00 88.73 C
ATOM 22 P U B 24 42.168 82.289 78.957 1.00109.48 P
ATOM 23 OP1 U B 24 40.761 82.656 78.630 1.00109.27 O
ATOM 24 OP2 U B 24 43.286 82.871 78.161 1.00108.32 O
ATOM 25 O5' U B 24 42.398 82.601 80.496 1.00112.10 O
TER
ATOM 2 P C A 25 38.673 82.575 85.034 1.00126.96 P
ATOM 3 OP1 C A 25 37.870 83.315 84.026 1.00127.17 O
ATOM 4 OP2 C A 25 38.988 83.221 86.336 1.00127.29 O
ATOM 5 O5' C A 25 37.943 81.193 85.332 1.00127.76 O
ATOM 6 C5' C A 25 37.316 80.965 86.584 1.00128.05 C
ATOM 7 C4' C A 25 36.267 82.017 86.831 1.00128.46 C
ATOM 8 O4' C A 25 35.502 82.217 85.618 1.00126.96 O
ATOM 9 C3' C A 25 35.281 81.664 87.932 1.00129.75 C
ATOM 10 O3' C A 25 34.917 82.853 88.635 1.00132.82 O
ATOM 11 C2' C A 25 34.096 81.093 87.153 1.00128.45 C
ATOM 12 O2' C A 25 32.864 81.281 87.823 1.00128.13 O
ATOM 13 C1' C A 25 34.150 81.885 85.842 1.00126.91 C
ATOM 14 N1 C A 25 33.695 81.135 84.656 1.00125.30 N
ATOM 15 C2 C A 25 32.475 80.442 84.696 1.00124.71 C
ATOM 16 O2 C A 25 31.791 80.482 85.725 1.00124.98 O
ATOM 17 N3 C A 25 32.076 79.746 83.604 1.00124.15 N
ATOM 18 C4 C A 25 32.840 79.726 82.509 1.00123.98 C
ATOM 19 N4 C A 25 32.410 79.020 81.460 1.00123.38 N
ATOM 20 C5 C A 25 34.080 80.427 82.441 1.00124.03 C
ATOM 21 C6 C A 25 34.464 81.112 83.526 1.00124.64 C
ATOM 22 P G A 26 35.659 83.228 90.015 1.00134.33 P
ATOM 23 OP1 G A 26 37.124 83.200 89.780 1.00134.32 O
ATOM 24 OP2 G A 26 35.069 82.374 91.075 1.00134.35 O
ATOM 25 O5' G A 26 35.226 84.740 90.284 1.00136.47 O
TER
ATOM 1 O3' C B 22 36.301 77.159 78.407 1.00 88.55 O
ATOM 2 P C B 23 36.906 78.618 78.688 1.00 91.09 P
ATOM 3 OP1 C B 23 36.567 78.989 80.086 1.00 90.96 O
ATOM 4 OP2 C B 23 36.512 79.517 77.575 1.00 90.53 O
ATOM 5 O5' C B 23 38.472 78.367 78.590 1.00 92.43 O
ATOM 6 C5' C B 23 39.363 79.447 78.405 1.00 95.14 C
ATOM 7 C4' C B 23 40.767 78.938 78.258 1.00 96.20 C
ATOM 8 O4' C B 23 40.798 77.939 77.220 1.00 94.60 O
ATOM 9 C3' C B 23 41.747 79.999 77.803 1.00 98.84 C
ATOM 10 O3' C B 23 42.272 80.693 78.911 1.00104.10 O
ATOM 11 C2' C B 23 42.817 79.202 77.081 1.00 97.08 C
ATOM 12 O2' C B 23 43.785 78.683 77.964 1.00 98.45 O
ATOM 13 C1' C B 23 41.998 78.061 76.484 1.00 94.22 C
ATOM 14 N1 C B 23 41.655 78.246 75.070 1.00 90.61 N
ATOM 15 C2 C B 23 42.684 78.238 74.129 1.00 89.85 C
ATOM 16 O2 C B 23 43.857 78.156 74.522 1.00 89.67 O
ATOM 17 N3 C B 23 42.377 78.322 72.820 1.00 88.30 N
ATOM 18 C4 C B 23 41.107 78.432 72.441 1.00 87.98 C
ATOM 19 N4 C B 23 40.854 78.505 71.137 1.00 87.94 N
ATOM 20 C5 C B 23 40.039 78.476 73.382 1.00 87.83 C
ATOM 21 C6 C B 23 40.356 78.387 74.675 1.00 88.73 C
ATOM 22 P U B 24 42.168 82.289 78.957 1.00109.48 P
ATOM 23 OP1 U B 24 40.761 82.656 78.630 1.00109.27 O
ATOM 24 OP2 U B 24 43.286 82.871 78.161 1.00108.32 O
ATOM 25 O5' U B 24 42.398 82.601 80.496 1.00112.10 O
TER
Atoms:
C2: (32.475,80.442,84.696)
OP1: (37.870,83.315,84.026)
OP2: (38.988,83.221,86.336)
C4: (32.840,79.726,82.509)
O5': (37.943,81.193,85.332)
C3': (35.281,81.664,87.932)
C1': (34.150,81.885,85.842)
O4': (35.502,82.217,85.618)
C5': (37.316,80.965,86.584)
P: (38.673,82.575,85.034)
O2: (31.791,80.482,85.725)
C4': (36.267,82.017,86.831)
C2': (34.096,81.093,87.153)
O2': (32.864,81.281,87.823)
N1: (33.695,81.135,84.656)
N3: (32.076,79.746,83.604)
N4: (32.410,79.020,81.460)
C6: (34.464,81.112,83.526)
C5: (34.080,80.427,82.441)
O3': (34.917,82.853,88.635)
OP1: (37.870,83.315,84.026)
OP2: (38.988,83.221,86.336)
C4: (32.840,79.726,82.509)
O5': (37.943,81.193,85.332)
C3': (35.281,81.664,87.932)
C1': (34.150,81.885,85.842)
O4': (35.502,82.217,85.618)
C5': (37.316,80.965,86.584)
P: (38.673,82.575,85.034)
O2: (31.791,80.482,85.725)
C4': (36.267,82.017,86.831)
C2': (34.096,81.093,87.153)
O2': (32.864,81.281,87.823)
N1: (33.695,81.135,84.656)
N3: (32.076,79.746,83.604)
N4: (32.410,79.020,81.460)
C6: (34.464,81.112,83.526)
C5: (34.080,80.427,82.441)
O3': (34.917,82.853,88.635)
C2: (42.684,78.238,74.129)
OP1: (36.567,78.989,80.086)
OP2: (36.512,79.517,77.575)
C4: (41.107,78.432,72.441)
O5': (38.472,78.367,78.590)
C3': (41.747,79.999,77.803)
C1': (41.998,78.061,76.484)
O4': (40.798,77.939,77.220)
C5': (39.363,79.447,78.405)
P: (36.906,78.618,78.688)
O2: (43.857,78.156,74.522)
C4': (40.767,78.938,78.258)
C2': (42.817,79.202,77.081)
O2': (43.785,78.683,77.964)
N1: (41.655,78.246,75.070)
N3: (42.377,78.322,72.820)
N4: (40.854,78.505,71.137)
C6: (40.356,78.387,74.675)
C5: (40.039,78.476,73.382)
O3': (42.272,80.693,78.911)
OP1: (36.567,78.989,80.086)
OP2: (36.512,79.517,77.575)
C4: (41.107,78.432,72.441)
O5': (38.472,78.367,78.590)
C3': (41.747,79.999,77.803)
C1': (41.998,78.061,76.484)
O4': (40.798,77.939,77.220)
C5': (39.363,79.447,78.405)
P: (36.906,78.618,78.688)
O2: (43.857,78.156,74.522)
C4': (40.767,78.938,78.258)
C2': (42.817,79.202,77.081)
O2': (43.785,78.683,77.964)
N1: (41.655,78.246,75.070)
N3: (42.377,78.322,72.820)
N4: (40.854,78.505,71.137)
C6: (40.356,78.387,74.675)
C5: (40.039,78.476,73.382)
O3': (42.272,80.693,78.911)
Image (generated by PyMOL):