Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VBX:B24:B22
Extra
PDB:
ATOM 1 O3' U A 23 40.317 82.262 85.793 1.00110.65 O
ATOM 2 P C A 24 38.852 82.656 86.290 1.00111.64 P
ATOM 3 OP1 C A 24 38.359 83.766 85.435 1.00111.68 O
ATOM 4 OP2 C A 24 38.915 82.833 87.761 1.00112.18 O
ATOM 5 O5' C A 24 37.991 81.351 86.012 1.00111.94 O
ATOM 6 C5' C A 24 37.164 80.834 87.032 1.00112.31 C
ATOM 7 C4' C A 24 36.077 81.823 87.336 1.00112.83 C
ATOM 8 O4' C A 24 35.279 82.007 86.140 1.00111.92 O
ATOM 9 C3' C A 24 35.128 81.404 88.446 1.00113.94 C
ATOM 10 O3' C A 24 34.777 82.565 89.197 1.00116.51 O
ATOM 11 C2' C A 24 33.940 80.820 87.682 1.00112.87 C
ATOM 12 O2' C A 24 32.712 80.921 88.376 1.00111.99 O
ATOM 13 C1' C A 24 33.934 81.657 86.400 1.00111.86 C
ATOM 14 N1 C A 24 33.424 80.933 85.220 1.00110.26 N
ATOM 15 C2 C A 24 32.142 80.359 85.264 1.00109.51 C
ATOM 16 O2 C A 24 31.471 80.459 86.300 1.00109.20 O
ATOM 17 N3 C A 24 31.673 79.707 84.176 1.00109.07 N
ATOM 18 C4 C A 24 32.427 79.608 83.078 1.00108.48 C
ATOM 19 N4 C A 24 31.921 78.953 82.035 1.00107.36 N
ATOM 20 C5 C A 24 33.733 80.178 83.007 1.00108.67 C
ATOM 21 C6 C A 24 34.188 80.825 84.089 1.00109.36 C
ATOM 22 P G A 25 35.613 82.936 90.522 1.00117.97 P
ATOM 23 OP1 G A 25 37.049 83.054 90.159 1.00117.36 O
ATOM 24 OP2 G A 25 35.201 81.984 91.585 1.00117.49 O
ATOM 25 O5' G A 25 35.096 84.388 90.917 1.00120.09 O
TER
ATOM 1 O3' C B 21 36.690 77.095 78.764 1.00 73.79 O
ATOM 2 P C B 22 37.056 78.643 78.950 1.00 76.60 P
ATOM 3 OP1 C B 22 36.239 79.126 80.092 1.00 76.50 O
ATOM 4 OP2 C B 22 36.945 79.305 77.628 1.00 76.79 O
ATOM 5 O5' C B 22 38.601 78.636 79.336 1.00 78.13 O
ATOM 6 C5' C B 22 39.378 79.811 79.165 1.00 81.97 C
ATOM 7 C4' C B 22 40.821 79.463 78.908 1.00 85.03 C
ATOM 8 O4' C B 22 40.871 78.410 77.930 1.00 84.80 O
ATOM 9 C3' C B 22 41.647 80.599 78.316 1.00 88.74 C
ATOM 10 O3' C B 22 42.231 81.387 79.339 1.00 93.92 O
ATOM 11 C2' C B 22 42.719 79.875 77.517 1.00 87.94 C
ATOM 12 O2' C B 22 43.839 79.545 78.311 1.00 89.78 O
ATOM 13 C1' C B 22 41.976 78.610 77.083 1.00 85.20 C
ATOM 14 N1 C B 22 41.484 78.654 75.712 1.00 83.03 N
ATOM 15 C2 C B 22 42.399 78.443 74.723 1.00 82.42 C
ATOM 16 O2 C B 22 43.572 78.233 75.060 1.00 81.82 O
ATOM 17 N3 C B 22 42.004 78.463 73.430 1.00 81.43 N
ATOM 18 C4 C B 22 40.725 78.700 73.131 1.00 82.21 C
ATOM 19 N4 C B 22 40.374 78.718 71.842 1.00 82.98 N
ATOM 20 C5 C B 22 39.747 78.927 74.141 1.00 82.53 C
ATOM 21 C6 C B 22 40.168 78.897 75.411 1.00 82.53 C
ATOM 22 P U B 23 41.304 82.372 80.190 1.00 98.50 P
ATOM 23 OP1 U B 23 40.059 82.585 79.404 1.00 98.40 O
ATOM 24 OP2 U B 23 42.124 83.535 80.612 1.00 98.77 O
ATOM 25 O5' U B 23 40.911 81.509 81.465 1.00100.79 O
TER
ATOM 2 P C A 24 38.852 82.656 86.290 1.00111.64 P
ATOM 3 OP1 C A 24 38.359 83.766 85.435 1.00111.68 O
ATOM 4 OP2 C A 24 38.915 82.833 87.761 1.00112.18 O
ATOM 5 O5' C A 24 37.991 81.351 86.012 1.00111.94 O
ATOM 6 C5' C A 24 37.164 80.834 87.032 1.00112.31 C
ATOM 7 C4' C A 24 36.077 81.823 87.336 1.00112.83 C
ATOM 8 O4' C A 24 35.279 82.007 86.140 1.00111.92 O
ATOM 9 C3' C A 24 35.128 81.404 88.446 1.00113.94 C
ATOM 10 O3' C A 24 34.777 82.565 89.197 1.00116.51 O
ATOM 11 C2' C A 24 33.940 80.820 87.682 1.00112.87 C
ATOM 12 O2' C A 24 32.712 80.921 88.376 1.00111.99 O
ATOM 13 C1' C A 24 33.934 81.657 86.400 1.00111.86 C
ATOM 14 N1 C A 24 33.424 80.933 85.220 1.00110.26 N
ATOM 15 C2 C A 24 32.142 80.359 85.264 1.00109.51 C
ATOM 16 O2 C A 24 31.471 80.459 86.300 1.00109.20 O
ATOM 17 N3 C A 24 31.673 79.707 84.176 1.00109.07 N
ATOM 18 C4 C A 24 32.427 79.608 83.078 1.00108.48 C
ATOM 19 N4 C A 24 31.921 78.953 82.035 1.00107.36 N
ATOM 20 C5 C A 24 33.733 80.178 83.007 1.00108.67 C
ATOM 21 C6 C A 24 34.188 80.825 84.089 1.00109.36 C
ATOM 22 P G A 25 35.613 82.936 90.522 1.00117.97 P
ATOM 23 OP1 G A 25 37.049 83.054 90.159 1.00117.36 O
ATOM 24 OP2 G A 25 35.201 81.984 91.585 1.00117.49 O
ATOM 25 O5' G A 25 35.096 84.388 90.917 1.00120.09 O
TER
ATOM 1 O3' C B 21 36.690 77.095 78.764 1.00 73.79 O
ATOM 2 P C B 22 37.056 78.643 78.950 1.00 76.60 P
ATOM 3 OP1 C B 22 36.239 79.126 80.092 1.00 76.50 O
ATOM 4 OP2 C B 22 36.945 79.305 77.628 1.00 76.79 O
ATOM 5 O5' C B 22 38.601 78.636 79.336 1.00 78.13 O
ATOM 6 C5' C B 22 39.378 79.811 79.165 1.00 81.97 C
ATOM 7 C4' C B 22 40.821 79.463 78.908 1.00 85.03 C
ATOM 8 O4' C B 22 40.871 78.410 77.930 1.00 84.80 O
ATOM 9 C3' C B 22 41.647 80.599 78.316 1.00 88.74 C
ATOM 10 O3' C B 22 42.231 81.387 79.339 1.00 93.92 O
ATOM 11 C2' C B 22 42.719 79.875 77.517 1.00 87.94 C
ATOM 12 O2' C B 22 43.839 79.545 78.311 1.00 89.78 O
ATOM 13 C1' C B 22 41.976 78.610 77.083 1.00 85.20 C
ATOM 14 N1 C B 22 41.484 78.654 75.712 1.00 83.03 N
ATOM 15 C2 C B 22 42.399 78.443 74.723 1.00 82.42 C
ATOM 16 O2 C B 22 43.572 78.233 75.060 1.00 81.82 O
ATOM 17 N3 C B 22 42.004 78.463 73.430 1.00 81.43 N
ATOM 18 C4 C B 22 40.725 78.700 73.131 1.00 82.21 C
ATOM 19 N4 C B 22 40.374 78.718 71.842 1.00 82.98 N
ATOM 20 C5 C B 22 39.747 78.927 74.141 1.00 82.53 C
ATOM 21 C6 C B 22 40.168 78.897 75.411 1.00 82.53 C
ATOM 22 P U B 23 41.304 82.372 80.190 1.00 98.50 P
ATOM 23 OP1 U B 23 40.059 82.585 79.404 1.00 98.40 O
ATOM 24 OP2 U B 23 42.124 83.535 80.612 1.00 98.77 O
ATOM 25 O5' U B 23 40.911 81.509 81.465 1.00100.79 O
TER
Atoms:
C2: (32.142,80.359,85.264)
OP1: (38.359,83.766,85.435)
OP2: (38.915,82.833,87.761)
C4: (32.427,79.608,83.078)
O5': (37.991,81.351,86.012)
C3': (35.128,81.404,88.446)
C1': (33.934,81.657,86.400)
O4': (35.279,82.007,86.140)
C5': (37.164,80.834,87.032)
P: (38.852,82.656,86.290)
O2: (31.471,80.459,86.300)
C4': (36.077,81.823,87.336)
C2': (33.940,80.820,87.682)
O2': (32.712,80.921,88.376)
N1: (33.424,80.933,85.220)
N3: (31.673,79.707,84.176)
N4: (31.921,78.953,82.035)
C6: (34.188,80.825,84.089)
C5: (33.733,80.178,83.007)
O3': (34.777,82.565,89.197)
OP1: (38.359,83.766,85.435)
OP2: (38.915,82.833,87.761)
C4: (32.427,79.608,83.078)
O5': (37.991,81.351,86.012)
C3': (35.128,81.404,88.446)
C1': (33.934,81.657,86.400)
O4': (35.279,82.007,86.140)
C5': (37.164,80.834,87.032)
P: (38.852,82.656,86.290)
O2: (31.471,80.459,86.300)
C4': (36.077,81.823,87.336)
C2': (33.940,80.820,87.682)
O2': (32.712,80.921,88.376)
N1: (33.424,80.933,85.220)
N3: (31.673,79.707,84.176)
N4: (31.921,78.953,82.035)
C6: (34.188,80.825,84.089)
C5: (33.733,80.178,83.007)
O3': (34.777,82.565,89.197)
C2: (42.399,78.443,74.723)
OP1: (36.239,79.126,80.092)
OP2: (36.945,79.305,77.628)
C4: (40.725,78.700,73.131)
O5': (38.601,78.636,79.336)
C3': (41.647,80.599,78.316)
C1': (41.976,78.610,77.083)
O4': (40.871,78.410,77.930)
C5': (39.378,79.811,79.165)
P: (37.056,78.643,78.950)
O2: (43.572,78.233,75.060)
C4': (40.821,79.463,78.908)
C2': (42.719,79.875,77.517)
O2': (43.839,79.545,78.311)
N1: (41.484,78.654,75.712)
N3: (42.004,78.463,73.430)
N4: (40.374,78.718,71.842)
C6: (40.168,78.897,75.411)
C5: (39.747,78.927,74.141)
O3': (42.231,81.387,79.339)
OP1: (36.239,79.126,80.092)
OP2: (36.945,79.305,77.628)
C4: (40.725,78.700,73.131)
O5': (38.601,78.636,79.336)
C3': (41.647,80.599,78.316)
C1': (41.976,78.610,77.083)
O4': (40.871,78.410,77.930)
C5': (39.378,79.811,79.165)
P: (37.056,78.643,78.950)
O2: (43.572,78.233,75.060)
C4': (40.821,79.463,78.908)
C2': (42.719,79.875,77.517)
O2': (43.839,79.545,78.311)
N1: (41.484,78.654,75.712)
N3: (42.004,78.463,73.430)
N4: (40.374,78.718,71.842)
C6: (40.168,78.897,75.411)
C5: (39.747,78.927,74.141)
O3': (42.231,81.387,79.339)
Image (generated by PyMOL):