Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:941:939
Extra
PDB:
ATOM 1 O3' C A 40 94.026 23.078 91.999 1.00 80.69 O
ATOM 2 P C A 41 92.875 21.973 91.794 1.00 81.32 P
ATOM 3 OP1 C A 41 93.404 20.915 90.894 1.00 81.60 O
ATOM 4 OP2 C A 41 91.608 22.665 91.447 1.00 81.40 O
ATOM 5 O5' C A 41 92.718 21.335 93.240 1.00 80.15 O
ATOM 6 C5' C A 41 91.517 20.673 93.607 1.00 79.60 C
ATOM 7 C4' C A 41 91.434 20.530 95.101 1.00 79.53 C
ATOM 8 O4' C A 41 91.546 21.825 95.742 1.00 80.00 O
ATOM 9 C3' C A 41 90.092 19.996 95.547 1.00 79.40 C
ATOM 10 O3' C A 41 90.112 18.587 95.457 1.00 78.38 O
ATOM 11 C2' C A 41 89.973 20.521 96.968 1.00 80.25 C
ATOM 12 O2' C A 41 90.695 19.730 97.891 1.00 81.91 O
ATOM 13 C1' C A 41 90.643 21.895 96.837 1.00 80.52 C
ATOM 14 N1 C A 41 89.733 23.046 96.621 1.00 81.29 N
ATOM 15 C2 C A 41 88.783 23.372 97.611 1.00 81.24 C
ATOM 16 O2 C A 41 88.689 22.659 98.620 1.00 81.96 O
ATOM 17 N3 C A 41 87.994 24.459 97.436 1.00 81.14 N
ATOM 18 C4 C A 41 88.118 25.204 96.333 1.00 81.07 C
ATOM 19 N4 C A 41 87.341 26.284 96.218 1.00 81.46 N
ATOM 20 C5 C A 41 89.049 24.880 95.304 1.00 80.00 C
ATOM 21 C6 C A 41 89.825 23.806 95.485 1.00 81.03 C
ATOM 22 P G A 42 89.398 17.873 94.217 1.00 78.57 P
ATOM 23 OP1 G A 42 89.464 16.407 94.436 1.00 80.09 O
ATOM 24 OP2 G A 42 89.919 18.443 92.949 1.00 77.46 O
ATOM 25 O5' G A 42 87.892 18.341 94.396 1.00 77.88 O
TER
ATOM 1 O3' U B 38 88.053 28.001 91.334 1.00 76.37 O
ATOM 2 P C B 39 89.127 28.639 92.350 1.00 75.53 P
ATOM 3 OP1 C B 39 89.552 27.598 93.306 1.00 77.68 O
ATOM 4 OP2 C B 39 88.509 29.885 92.860 1.00 74.76 O
ATOM 5 O5' C B 39 90.399 29.036 91.468 1.00 77.42 O
ATOM 6 C5' C B 39 90.339 29.061 90.031 1.00 77.91 C
ATOM 7 C4' C B 39 91.595 29.678 89.443 1.00 78.56 C
ATOM 8 O4' C B 39 91.720 31.065 89.842 1.00 78.63 O
ATOM 9 C3' C B 39 92.956 29.143 89.862 1.00 78.35 C
ATOM 10 O3' C B 39 93.259 27.896 89.241 1.00 79.45 O
ATOM 11 C2' C B 39 93.874 30.233 89.310 1.00 78.01 C
ATOM 12 O2' C B 39 94.069 30.105 87.915 1.00 78.15 O
ATOM 13 C1' C B 39 93.042 31.493 89.555 1.00 77.18 C
ATOM 14 N1 C B 39 93.542 32.340 90.653 1.00 76.07 N
ATOM 15 C2 C B 39 94.648 33.178 90.410 1.00 76.13 C
ATOM 16 O2 C B 39 95.181 33.171 89.289 1.00 76.30 O
ATOM 17 N3 C B 39 95.107 33.970 91.403 1.00 76.21 N
ATOM 18 C4 C B 39 94.515 33.950 92.598 1.00 76.24 C
ATOM 19 N4 C B 39 94.999 34.758 93.546 1.00 75.48 N
ATOM 20 C5 C B 39 93.400 33.105 92.875 1.00 76.60 C
ATOM 21 C6 C B 39 92.951 32.323 91.884 1.00 75.95 C
ATOM 22 P C B 40 94.631 27.129 89.599 1.00 79.64 P
ATOM 23 OP1 C B 40 95.730 28.127 89.683 1.00 78.99 O
ATOM 24 OP2 C B 40 94.756 25.984 88.657 1.00 78.97 O
ATOM 25 O5' C B 40 94.407 26.550 91.069 1.00 79.37 O
TER
ATOM 2 P C A 41 92.875 21.973 91.794 1.00 81.32 P
ATOM 3 OP1 C A 41 93.404 20.915 90.894 1.00 81.60 O
ATOM 4 OP2 C A 41 91.608 22.665 91.447 1.00 81.40 O
ATOM 5 O5' C A 41 92.718 21.335 93.240 1.00 80.15 O
ATOM 6 C5' C A 41 91.517 20.673 93.607 1.00 79.60 C
ATOM 7 C4' C A 41 91.434 20.530 95.101 1.00 79.53 C
ATOM 8 O4' C A 41 91.546 21.825 95.742 1.00 80.00 O
ATOM 9 C3' C A 41 90.092 19.996 95.547 1.00 79.40 C
ATOM 10 O3' C A 41 90.112 18.587 95.457 1.00 78.38 O
ATOM 11 C2' C A 41 89.973 20.521 96.968 1.00 80.25 C
ATOM 12 O2' C A 41 90.695 19.730 97.891 1.00 81.91 O
ATOM 13 C1' C A 41 90.643 21.895 96.837 1.00 80.52 C
ATOM 14 N1 C A 41 89.733 23.046 96.621 1.00 81.29 N
ATOM 15 C2 C A 41 88.783 23.372 97.611 1.00 81.24 C
ATOM 16 O2 C A 41 88.689 22.659 98.620 1.00 81.96 O
ATOM 17 N3 C A 41 87.994 24.459 97.436 1.00 81.14 N
ATOM 18 C4 C A 41 88.118 25.204 96.333 1.00 81.07 C
ATOM 19 N4 C A 41 87.341 26.284 96.218 1.00 81.46 N
ATOM 20 C5 C A 41 89.049 24.880 95.304 1.00 80.00 C
ATOM 21 C6 C A 41 89.825 23.806 95.485 1.00 81.03 C
ATOM 22 P G A 42 89.398 17.873 94.217 1.00 78.57 P
ATOM 23 OP1 G A 42 89.464 16.407 94.436 1.00 80.09 O
ATOM 24 OP2 G A 42 89.919 18.443 92.949 1.00 77.46 O
ATOM 25 O5' G A 42 87.892 18.341 94.396 1.00 77.88 O
TER
ATOM 1 O3' U B 38 88.053 28.001 91.334 1.00 76.37 O
ATOM 2 P C B 39 89.127 28.639 92.350 1.00 75.53 P
ATOM 3 OP1 C B 39 89.552 27.598 93.306 1.00 77.68 O
ATOM 4 OP2 C B 39 88.509 29.885 92.860 1.00 74.76 O
ATOM 5 O5' C B 39 90.399 29.036 91.468 1.00 77.42 O
ATOM 6 C5' C B 39 90.339 29.061 90.031 1.00 77.91 C
ATOM 7 C4' C B 39 91.595 29.678 89.443 1.00 78.56 C
ATOM 8 O4' C B 39 91.720 31.065 89.842 1.00 78.63 O
ATOM 9 C3' C B 39 92.956 29.143 89.862 1.00 78.35 C
ATOM 10 O3' C B 39 93.259 27.896 89.241 1.00 79.45 O
ATOM 11 C2' C B 39 93.874 30.233 89.310 1.00 78.01 C
ATOM 12 O2' C B 39 94.069 30.105 87.915 1.00 78.15 O
ATOM 13 C1' C B 39 93.042 31.493 89.555 1.00 77.18 C
ATOM 14 N1 C B 39 93.542 32.340 90.653 1.00 76.07 N
ATOM 15 C2 C B 39 94.648 33.178 90.410 1.00 76.13 C
ATOM 16 O2 C B 39 95.181 33.171 89.289 1.00 76.30 O
ATOM 17 N3 C B 39 95.107 33.970 91.403 1.00 76.21 N
ATOM 18 C4 C B 39 94.515 33.950 92.598 1.00 76.24 C
ATOM 19 N4 C B 39 94.999 34.758 93.546 1.00 75.48 N
ATOM 20 C5 C B 39 93.400 33.105 92.875 1.00 76.60 C
ATOM 21 C6 C B 39 92.951 32.323 91.884 1.00 75.95 C
ATOM 22 P C B 40 94.631 27.129 89.599 1.00 79.64 P
ATOM 23 OP1 C B 40 95.730 28.127 89.683 1.00 78.99 O
ATOM 24 OP2 C B 40 94.756 25.984 88.657 1.00 78.97 O
ATOM 25 O5' C B 40 94.407 26.550 91.069 1.00 79.37 O
TER
Atoms:
C2: (88.783,23.372,97.611)
OP1: (93.404,20.915,90.894)
OP2: (91.608,22.665,91.447)
C4: (88.118,25.204,96.333)
O5': (92.718,21.335,93.240)
C3': (90.092,19.996,95.547)
C1': (90.643,21.895,96.837)
O4': (91.546,21.825,95.742)
C5': (91.517,20.673,93.607)
P: (92.875,21.973,91.794)
O2: (88.689,22.659,98.620)
C4': (91.434,20.530,95.101)
C2': (89.973,20.521,96.968)
O2': (90.695,19.730,97.891)
N1: (89.733,23.046,96.621)
N3: (87.994,24.459,97.436)
N4: (87.341,26.284,96.218)
C6: (89.825,23.806,95.485)
C5: (89.049,24.880,95.304)
O3': (90.112,18.587,95.457)
OP1: (93.404,20.915,90.894)
OP2: (91.608,22.665,91.447)
C4: (88.118,25.204,96.333)
O5': (92.718,21.335,93.240)
C3': (90.092,19.996,95.547)
C1': (90.643,21.895,96.837)
O4': (91.546,21.825,95.742)
C5': (91.517,20.673,93.607)
P: (92.875,21.973,91.794)
O2: (88.689,22.659,98.620)
C4': (91.434,20.530,95.101)
C2': (89.973,20.521,96.968)
O2': (90.695,19.730,97.891)
N1: (89.733,23.046,96.621)
N3: (87.994,24.459,97.436)
N4: (87.341,26.284,96.218)
C6: (89.825,23.806,95.485)
C5: (89.049,24.880,95.304)
O3': (90.112,18.587,95.457)
C2: (94.648,33.178,90.410)
OP1: (89.552,27.598,93.306)
OP2: (88.509,29.885,92.860)
C4: (94.515,33.950,92.598)
O5': (90.399,29.036,91.468)
C3': (92.956,29.143,89.862)
C1': (93.042,31.493,89.555)
O4': (91.720,31.065,89.842)
C5': (90.339,29.061,90.031)
P: (89.127,28.639,92.350)
O2: (95.181,33.171,89.289)
C4': (91.595,29.678,89.443)
C2': (93.874,30.233,89.310)
O2': (94.069,30.105,87.915)
N1: (93.542,32.340,90.653)
N3: (95.107,33.970,91.403)
N4: (94.999,34.758,93.546)
C6: (92.951,32.323,91.884)
C5: (93.400,33.105,92.875)
O3': (93.259,27.896,89.241)
OP1: (89.552,27.598,93.306)
OP2: (88.509,29.885,92.860)
C4: (94.515,33.950,92.598)
O5': (90.399,29.036,91.468)
C3': (92.956,29.143,89.862)
C1': (93.042,31.493,89.555)
O4': (91.720,31.065,89.842)
C5': (90.339,29.061,90.031)
P: (89.127,28.639,92.350)
O2: (95.181,33.171,89.289)
C4': (91.595,29.678,89.443)
C2': (93.874,30.233,89.310)
O2': (94.069,30.105,87.915)
N1: (93.542,32.340,90.653)
N3: (95.107,33.970,91.403)
N4: (94.999,34.758,93.546)
C6: (92.951,32.323,91.884)
C5: (93.400,33.105,92.875)
O3': (93.259,27.896,89.241)
Image (generated by PyMOL):