Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:929:928
Extra
PDB:
ATOM 1 O3' C A 28 75.123 16.060 104.913 1.00 72.83 O
ATOM 2 P C A 29 76.515 15.539 104.294 1.00 74.79 P
ATOM 3 OP1 C A 29 77.548 15.789 105.335 1.00 72.73 O
ATOM 4 OP2 C A 29 76.693 16.110 102.935 1.00 74.53 O
ATOM 5 O5' C A 29 76.313 13.967 104.090 1.00 75.50 O
ATOM 6 C5' C A 29 76.182 13.067 105.216 1.00 76.39 C
ATOM 7 C4' C A 29 75.934 11.649 104.736 1.00 76.54 C
ATOM 8 O4' C A 29 74.667 11.583 104.034 1.00 75.92 O
ATOM 9 C3' C A 29 76.947 11.089 103.751 1.00 77.98 C
ATOM 10 O3' C A 29 78.104 10.592 104.438 1.00 81.49 O
ATOM 11 C2' C A 29 76.143 10.008 103.030 1.00 76.55 C
ATOM 12 O2' C A 29 76.036 8.801 103.751 1.00 75.22 O
ATOM 13 C1' C A 29 74.753 10.647 102.974 1.00 76.41 C
ATOM 14 N1 C A 29 74.427 11.338 101.709 1.00 77.38 N
ATOM 15 C2 C A 29 74.024 10.577 100.602 1.00 77.51 C
ATOM 16 O2 C A 29 73.965 9.346 100.705 1.00 78.20 O
ATOM 17 N3 C A 29 73.710 11.205 99.447 1.00 78.03 N
ATOM 18 C4 C A 29 73.786 12.534 99.368 1.00 77.84 C
ATOM 19 N4 C A 29 73.455 13.111 98.212 1.00 77.94 N
ATOM 20 C5 C A 29 74.199 13.332 100.473 1.00 77.52 C
ATOM 21 C6 C A 29 74.508 12.700 101.611 1.00 77.75 C
ATOM 22 P C A 30 79.536 10.568 103.698 1.00 84.11 P
ATOM 23 OP1 C A 30 80.554 10.078 104.673 1.00 83.62 O
ATOM 24 OP2 C A 30 79.755 11.871 103.012 1.00 84.68 O
ATOM 25 O5' C A 30 79.346 9.446 102.585 1.00 83.79 O
TER
ATOM 1 O3' U B 27 70.364 17.536 101.514 1.00 68.13 O
ATOM 2 P C B 28 71.719 17.284 100.696 1.00 66.69 P
ATOM 3 OP1 C B 28 72.197 18.607 100.243 1.00 66.57 O
ATOM 4 OP2 C B 28 71.487 16.213 99.696 1.00 66.83 O
ATOM 5 O5' C B 28 72.707 16.750 101.828 1.00 68.77 O
ATOM 6 C5' C B 28 72.931 17.528 103.023 1.00 69.92 C
ATOM 7 C4' C B 28 72.841 16.658 104.257 1.00 71.58 C
ATOM 8 O4' C B 28 71.581 15.929 104.251 1.00 71.72 O
ATOM 9 C3' C B 28 73.889 15.565 104.396 1.00 72.07 C
ATOM 10 O3' C B 28 75.123 16.060 104.913 1.00 72.83 O
ATOM 11 C2' C B 28 73.217 14.601 105.365 1.00 71.18 C
ATOM 12 O2' C B 28 73.290 15.031 106.711 1.00 69.89 O
ATOM 13 C1' C B 28 71.762 14.671 104.894 1.00 71.89 C
ATOM 14 N1 C B 28 71.389 13.581 103.965 1.00 71.24 N
ATOM 15 C2 C B 28 71.306 12.268 104.460 1.00 70.08 C
ATOM 16 O2 C B 28 71.568 12.052 105.652 1.00 68.86 O
ATOM 17 N3 C B 28 70.947 11.268 103.625 1.00 70.46 N
ATOM 18 C4 C B 28 70.680 11.529 102.346 1.00 70.60 C
ATOM 19 N4 C B 28 70.321 10.509 101.567 1.00 70.63 N
ATOM 20 C5 C B 28 70.766 12.847 101.811 1.00 71.35 C
ATOM 21 C6 C B 28 71.120 13.834 102.647 1.00 72.09 C
ATOM 22 P C B 29 76.515 15.539 104.294 1.00 74.79 P
ATOM 23 OP1 C B 29 77.548 15.789 105.335 1.00 72.73 O
ATOM 24 OP2 C B 29 76.693 16.110 102.935 1.00 74.53 O
ATOM 25 O5' C B 29 76.313 13.967 104.090 1.00 75.50 O
TER
ATOM 2 P C A 29 76.515 15.539 104.294 1.00 74.79 P
ATOM 3 OP1 C A 29 77.548 15.789 105.335 1.00 72.73 O
ATOM 4 OP2 C A 29 76.693 16.110 102.935 1.00 74.53 O
ATOM 5 O5' C A 29 76.313 13.967 104.090 1.00 75.50 O
ATOM 6 C5' C A 29 76.182 13.067 105.216 1.00 76.39 C
ATOM 7 C4' C A 29 75.934 11.649 104.736 1.00 76.54 C
ATOM 8 O4' C A 29 74.667 11.583 104.034 1.00 75.92 O
ATOM 9 C3' C A 29 76.947 11.089 103.751 1.00 77.98 C
ATOM 10 O3' C A 29 78.104 10.592 104.438 1.00 81.49 O
ATOM 11 C2' C A 29 76.143 10.008 103.030 1.00 76.55 C
ATOM 12 O2' C A 29 76.036 8.801 103.751 1.00 75.22 O
ATOM 13 C1' C A 29 74.753 10.647 102.974 1.00 76.41 C
ATOM 14 N1 C A 29 74.427 11.338 101.709 1.00 77.38 N
ATOM 15 C2 C A 29 74.024 10.577 100.602 1.00 77.51 C
ATOM 16 O2 C A 29 73.965 9.346 100.705 1.00 78.20 O
ATOM 17 N3 C A 29 73.710 11.205 99.447 1.00 78.03 N
ATOM 18 C4 C A 29 73.786 12.534 99.368 1.00 77.84 C
ATOM 19 N4 C A 29 73.455 13.111 98.212 1.00 77.94 N
ATOM 20 C5 C A 29 74.199 13.332 100.473 1.00 77.52 C
ATOM 21 C6 C A 29 74.508 12.700 101.611 1.00 77.75 C
ATOM 22 P C A 30 79.536 10.568 103.698 1.00 84.11 P
ATOM 23 OP1 C A 30 80.554 10.078 104.673 1.00 83.62 O
ATOM 24 OP2 C A 30 79.755 11.871 103.012 1.00 84.68 O
ATOM 25 O5' C A 30 79.346 9.446 102.585 1.00 83.79 O
TER
ATOM 1 O3' U B 27 70.364 17.536 101.514 1.00 68.13 O
ATOM 2 P C B 28 71.719 17.284 100.696 1.00 66.69 P
ATOM 3 OP1 C B 28 72.197 18.607 100.243 1.00 66.57 O
ATOM 4 OP2 C B 28 71.487 16.213 99.696 1.00 66.83 O
ATOM 5 O5' C B 28 72.707 16.750 101.828 1.00 68.77 O
ATOM 6 C5' C B 28 72.931 17.528 103.023 1.00 69.92 C
ATOM 7 C4' C B 28 72.841 16.658 104.257 1.00 71.58 C
ATOM 8 O4' C B 28 71.581 15.929 104.251 1.00 71.72 O
ATOM 9 C3' C B 28 73.889 15.565 104.396 1.00 72.07 C
ATOM 10 O3' C B 28 75.123 16.060 104.913 1.00 72.83 O
ATOM 11 C2' C B 28 73.217 14.601 105.365 1.00 71.18 C
ATOM 12 O2' C B 28 73.290 15.031 106.711 1.00 69.89 O
ATOM 13 C1' C B 28 71.762 14.671 104.894 1.00 71.89 C
ATOM 14 N1 C B 28 71.389 13.581 103.965 1.00 71.24 N
ATOM 15 C2 C B 28 71.306 12.268 104.460 1.00 70.08 C
ATOM 16 O2 C B 28 71.568 12.052 105.652 1.00 68.86 O
ATOM 17 N3 C B 28 70.947 11.268 103.625 1.00 70.46 N
ATOM 18 C4 C B 28 70.680 11.529 102.346 1.00 70.60 C
ATOM 19 N4 C B 28 70.321 10.509 101.567 1.00 70.63 N
ATOM 20 C5 C B 28 70.766 12.847 101.811 1.00 71.35 C
ATOM 21 C6 C B 28 71.120 13.834 102.647 1.00 72.09 C
ATOM 22 P C B 29 76.515 15.539 104.294 1.00 74.79 P
ATOM 23 OP1 C B 29 77.548 15.789 105.335 1.00 72.73 O
ATOM 24 OP2 C B 29 76.693 16.110 102.935 1.00 74.53 O
ATOM 25 O5' C B 29 76.313 13.967 104.090 1.00 75.50 O
TER
Atoms:
C2: (74.024,10.577,100.602)
OP1: (77.548,15.789,105.335)
OP2: (76.693,16.110,102.935)
C4: (73.786,12.534,99.368)
O5': (76.313,13.967,104.090)
C3': (76.947,11.089,103.751)
C1': (74.753,10.647,102.974)
O4': (74.667,11.583,104.034)
C5': (76.182,13.067,105.216)
P: (76.515,15.539,104.294)
O2: (73.965,9.346,100.705)
C4': (75.934,11.649,104.736)
C2': (76.143,10.008,103.030)
O2': (76.036,8.801,103.751)
N1: (74.427,11.338,101.709)
N3: (73.710,11.205,99.447)
N4: (73.455,13.111,98.212)
C6: (74.508,12.700,101.611)
C5: (74.199,13.332,100.473)
O3': (78.104,10.592,104.438)
OP1: (77.548,15.789,105.335)
OP2: (76.693,16.110,102.935)
C4: (73.786,12.534,99.368)
O5': (76.313,13.967,104.090)
C3': (76.947,11.089,103.751)
C1': (74.753,10.647,102.974)
O4': (74.667,11.583,104.034)
C5': (76.182,13.067,105.216)
P: (76.515,15.539,104.294)
O2: (73.965,9.346,100.705)
C4': (75.934,11.649,104.736)
C2': (76.143,10.008,103.030)
O2': (76.036,8.801,103.751)
N1: (74.427,11.338,101.709)
N3: (73.710,11.205,99.447)
N4: (73.455,13.111,98.212)
C6: (74.508,12.700,101.611)
C5: (74.199,13.332,100.473)
O3': (78.104,10.592,104.438)
C2: (71.306,12.268,104.460)
OP1: (72.197,18.607,100.243)
OP2: (71.487,16.213,99.696)
C4: (70.680,11.529,102.346)
O5': (72.707,16.750,101.828)
C3': (73.889,15.565,104.396)
C1': (71.762,14.671,104.894)
O4': (71.581,15.929,104.251)
C5': (72.931,17.528,103.023)
P: (71.719,17.284,100.696)
O2: (71.568,12.052,105.652)
C4': (72.841,16.658,104.257)
C2': (73.217,14.601,105.365)
O2': (73.290,15.031,106.711)
N1: (71.389,13.581,103.965)
N3: (70.947,11.268,103.625)
N4: (70.321,10.509,101.567)
C6: (71.120,13.834,102.647)
C5: (70.766,12.847,101.811)
O3': (75.123,16.060,104.913)
OP1: (72.197,18.607,100.243)
OP2: (71.487,16.213,99.696)
C4: (70.680,11.529,102.346)
O5': (72.707,16.750,101.828)
C3': (73.889,15.565,104.396)
C1': (71.762,14.671,104.894)
O4': (71.581,15.929,104.251)
C5': (72.931,17.528,103.023)
P: (71.719,17.284,100.696)
O2: (71.568,12.052,105.652)
C4': (72.841,16.658,104.257)
C2': (73.217,14.601,105.365)
O2': (73.290,15.031,106.711)
N1: (71.389,13.581,103.965)
N3: (70.947,11.268,103.625)
N4: (70.321,10.509,101.567)
C6: (71.120,13.834,102.647)
C5: (70.766,12.847,101.811)
O3': (75.123,16.060,104.913)
Image (generated by PyMOL):