Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:941:939
Extra
PDB:
ATOM 1 O3' C A 40 94.093 23.172 92.458 1.00 88.48 O
ATOM 2 P C A 41 92.912 22.098 92.279 1.00 89.23 P
ATOM 3 OP1 C A 41 93.396 21.029 91.365 1.00 89.70 O
ATOM 4 OP2 C A 41 91.667 22.835 91.949 1.00 89.94 O
ATOM 5 O5' C A 41 92.752 21.459 93.729 1.00 88.43 O
ATOM 6 C5' C A 41 91.604 20.674 94.043 1.00 88.20 C
ATOM 7 C4' C A 41 91.482 20.469 95.532 1.00 88.18 C
ATOM 8 O4' C A 41 91.623 21.725 96.239 1.00 89.02 O
ATOM 9 C3' C A 41 90.106 19.965 95.911 1.00 88.32 C
ATOM 10 O3' C A 41 90.049 18.562 95.764 1.00 87.70 O
ATOM 11 C2' C A 41 89.941 20.441 97.342 1.00 89.10 C
ATOM 12 O2' C A 41 90.565 19.577 98.270 1.00 90.74 O
ATOM 13 C1' C A 41 90.669 21.790 97.292 1.00 89.96 C
ATOM 14 N1 C A 41 89.801 22.969 97.061 1.00 91.45 N
ATOM 15 C2 C A 41 88.877 23.353 98.055 1.00 91.93 C
ATOM 16 O2 C A 41 88.772 22.666 99.083 1.00 92.91 O
ATOM 17 N3 C A 41 88.123 24.462 97.862 1.00 91.38 N
ATOM 18 C4 C A 41 88.254 25.171 96.737 1.00 91.12 C
ATOM 19 N4 C A 41 87.513 26.270 96.600 1.00 91.42 N
ATOM 20 C5 C A 41 89.158 24.788 95.704 1.00 91.19 C
ATOM 21 C6 C A 41 89.903 23.695 95.904 1.00 91.61 C
ATOM 22 P G A 42 89.262 17.942 94.517 1.00 87.97 P
ATOM 23 OP1 G A 42 89.147 16.478 94.733 1.00 88.89 O
ATOM 24 OP2 G A 42 89.874 18.447 93.256 1.00 86.40 O
ATOM 25 O5' G A 42 87.819 18.590 94.681 1.00 86.13 O
TER
ATOM 1 O3' U B 38 88.272 28.011 91.772 1.00 86.71 O
ATOM 2 P C B 39 89.444 28.559 92.735 1.00 86.72 P
ATOM 3 OP1 C B 39 90.164 27.389 93.295 1.00 87.96 O
ATOM 4 OP2 C B 39 88.829 29.549 93.658 1.00 85.09 O
ATOM 5 O5' C B 39 90.446 29.338 91.765 1.00 87.60 O
ATOM 6 C5' C B 39 90.511 29.024 90.360 1.00 87.61 C
ATOM 7 C4' C B 39 91.720 29.666 89.711 1.00 88.01 C
ATOM 8 O4' C B 39 91.767 31.077 90.048 1.00 88.16 O
ATOM 9 C3' C B 39 93.113 29.231 90.143 1.00 88.28 C
ATOM 10 O3' C B 39 93.494 27.972 89.591 1.00 89.42 O
ATOM 11 C2' C B 39 93.957 30.345 89.530 1.00 87.50 C
ATOM 12 O2' C B 39 94.110 30.194 88.132 1.00 86.58 O
ATOM 13 C1' C B 39 93.073 31.565 89.780 1.00 86.46 C
ATOM 14 N1 C B 39 93.539 32.386 90.912 1.00 85.54 N
ATOM 15 C2 C B 39 94.463 33.414 90.660 1.00 85.71 C
ATOM 16 O2 C B 39 94.853 33.605 89.499 1.00 87.47 O
ATOM 17 N3 C B 39 94.908 34.173 91.683 1.00 85.11 N
ATOM 18 C4 C B 39 94.470 33.943 92.919 1.00 84.61 C
ATOM 19 N4 C B 39 94.940 34.722 93.898 1.00 84.29 N
ATOM 20 C5 C B 39 93.531 32.905 93.207 1.00 85.23 C
ATOM 21 C6 C B 39 93.097 32.157 92.184 1.00 84.60 C
ATOM 22 P C B 40 94.885 27.283 90.036 1.00 89.80 P
ATOM 23 OP1 C B 40 95.922 28.342 90.218 1.00 87.95 O
ATOM 24 OP2 C B 40 95.134 26.177 89.077 1.00 89.22 O
ATOM 25 O5' C B 40 94.591 26.644 91.473 1.00 89.71 O
TER
ATOM 2 P C A 41 92.912 22.098 92.279 1.00 89.23 P
ATOM 3 OP1 C A 41 93.396 21.029 91.365 1.00 89.70 O
ATOM 4 OP2 C A 41 91.667 22.835 91.949 1.00 89.94 O
ATOM 5 O5' C A 41 92.752 21.459 93.729 1.00 88.43 O
ATOM 6 C5' C A 41 91.604 20.674 94.043 1.00 88.20 C
ATOM 7 C4' C A 41 91.482 20.469 95.532 1.00 88.18 C
ATOM 8 O4' C A 41 91.623 21.725 96.239 1.00 89.02 O
ATOM 9 C3' C A 41 90.106 19.965 95.911 1.00 88.32 C
ATOM 10 O3' C A 41 90.049 18.562 95.764 1.00 87.70 O
ATOM 11 C2' C A 41 89.941 20.441 97.342 1.00 89.10 C
ATOM 12 O2' C A 41 90.565 19.577 98.270 1.00 90.74 O
ATOM 13 C1' C A 41 90.669 21.790 97.292 1.00 89.96 C
ATOM 14 N1 C A 41 89.801 22.969 97.061 1.00 91.45 N
ATOM 15 C2 C A 41 88.877 23.353 98.055 1.00 91.93 C
ATOM 16 O2 C A 41 88.772 22.666 99.083 1.00 92.91 O
ATOM 17 N3 C A 41 88.123 24.462 97.862 1.00 91.38 N
ATOM 18 C4 C A 41 88.254 25.171 96.737 1.00 91.12 C
ATOM 19 N4 C A 41 87.513 26.270 96.600 1.00 91.42 N
ATOM 20 C5 C A 41 89.158 24.788 95.704 1.00 91.19 C
ATOM 21 C6 C A 41 89.903 23.695 95.904 1.00 91.61 C
ATOM 22 P G A 42 89.262 17.942 94.517 1.00 87.97 P
ATOM 23 OP1 G A 42 89.147 16.478 94.733 1.00 88.89 O
ATOM 24 OP2 G A 42 89.874 18.447 93.256 1.00 86.40 O
ATOM 25 O5' G A 42 87.819 18.590 94.681 1.00 86.13 O
TER
ATOM 1 O3' U B 38 88.272 28.011 91.772 1.00 86.71 O
ATOM 2 P C B 39 89.444 28.559 92.735 1.00 86.72 P
ATOM 3 OP1 C B 39 90.164 27.389 93.295 1.00 87.96 O
ATOM 4 OP2 C B 39 88.829 29.549 93.658 1.00 85.09 O
ATOM 5 O5' C B 39 90.446 29.338 91.765 1.00 87.60 O
ATOM 6 C5' C B 39 90.511 29.024 90.360 1.00 87.61 C
ATOM 7 C4' C B 39 91.720 29.666 89.711 1.00 88.01 C
ATOM 8 O4' C B 39 91.767 31.077 90.048 1.00 88.16 O
ATOM 9 C3' C B 39 93.113 29.231 90.143 1.00 88.28 C
ATOM 10 O3' C B 39 93.494 27.972 89.591 1.00 89.42 O
ATOM 11 C2' C B 39 93.957 30.345 89.530 1.00 87.50 C
ATOM 12 O2' C B 39 94.110 30.194 88.132 1.00 86.58 O
ATOM 13 C1' C B 39 93.073 31.565 89.780 1.00 86.46 C
ATOM 14 N1 C B 39 93.539 32.386 90.912 1.00 85.54 N
ATOM 15 C2 C B 39 94.463 33.414 90.660 1.00 85.71 C
ATOM 16 O2 C B 39 94.853 33.605 89.499 1.00 87.47 O
ATOM 17 N3 C B 39 94.908 34.173 91.683 1.00 85.11 N
ATOM 18 C4 C B 39 94.470 33.943 92.919 1.00 84.61 C
ATOM 19 N4 C B 39 94.940 34.722 93.898 1.00 84.29 N
ATOM 20 C5 C B 39 93.531 32.905 93.207 1.00 85.23 C
ATOM 21 C6 C B 39 93.097 32.157 92.184 1.00 84.60 C
ATOM 22 P C B 40 94.885 27.283 90.036 1.00 89.80 P
ATOM 23 OP1 C B 40 95.922 28.342 90.218 1.00 87.95 O
ATOM 24 OP2 C B 40 95.134 26.177 89.077 1.00 89.22 O
ATOM 25 O5' C B 40 94.591 26.644 91.473 1.00 89.71 O
TER
Atoms:
C2: (88.877,23.353,98.055)
OP1: (93.396,21.029,91.365)
OP2: (91.667,22.835,91.949)
C4: (88.254,25.171,96.737)
O5': (92.752,21.459,93.729)
C3': (90.106,19.965,95.911)
C1': (90.669,21.790,97.292)
O4': (91.623,21.725,96.239)
C5': (91.604,20.674,94.043)
P: (92.912,22.098,92.279)
O2: (88.772,22.666,99.083)
C4': (91.482,20.469,95.532)
C2': (89.941,20.441,97.342)
O2': (90.565,19.577,98.270)
N1: (89.801,22.969,97.061)
N3: (88.123,24.462,97.862)
N4: (87.513,26.270,96.600)
C6: (89.903,23.695,95.904)
C5: (89.158,24.788,95.704)
O3': (90.049,18.562,95.764)
OP1: (93.396,21.029,91.365)
OP2: (91.667,22.835,91.949)
C4: (88.254,25.171,96.737)
O5': (92.752,21.459,93.729)
C3': (90.106,19.965,95.911)
C1': (90.669,21.790,97.292)
O4': (91.623,21.725,96.239)
C5': (91.604,20.674,94.043)
P: (92.912,22.098,92.279)
O2: (88.772,22.666,99.083)
C4': (91.482,20.469,95.532)
C2': (89.941,20.441,97.342)
O2': (90.565,19.577,98.270)
N1: (89.801,22.969,97.061)
N3: (88.123,24.462,97.862)
N4: (87.513,26.270,96.600)
C6: (89.903,23.695,95.904)
C5: (89.158,24.788,95.704)
O3': (90.049,18.562,95.764)
C2: (94.463,33.414,90.660)
OP1: (90.164,27.389,93.295)
OP2: (88.829,29.549,93.658)
C4: (94.470,33.943,92.919)
O5': (90.446,29.338,91.765)
C3': (93.113,29.231,90.143)
C1': (93.073,31.565,89.780)
O4': (91.767,31.077,90.048)
C5': (90.511,29.024,90.360)
P: (89.444,28.559,92.735)
O2: (94.853,33.605,89.499)
C4': (91.720,29.666,89.711)
C2': (93.957,30.345,89.530)
O2': (94.110,30.194,88.132)
N1: (93.539,32.386,90.912)
N3: (94.908,34.173,91.683)
N4: (94.940,34.722,93.898)
C6: (93.097,32.157,92.184)
C5: (93.531,32.905,93.207)
O3': (93.494,27.972,89.591)
OP1: (90.164,27.389,93.295)
OP2: (88.829,29.549,93.658)
C4: (94.470,33.943,92.919)
O5': (90.446,29.338,91.765)
C3': (93.113,29.231,90.143)
C1': (93.073,31.565,89.780)
O4': (91.767,31.077,90.048)
C5': (90.511,29.024,90.360)
P: (89.444,28.559,92.735)
O2: (94.853,33.605,89.499)
C4': (91.720,29.666,89.711)
C2': (93.957,30.345,89.530)
O2': (94.110,30.194,88.132)
N1: (93.539,32.386,90.912)
N3: (94.908,34.173,91.683)
N4: (94.940,34.722,93.898)
C6: (93.097,32.157,92.184)
C5: (93.531,32.905,93.207)
O3': (93.494,27.972,89.591)
Image (generated by PyMOL):