Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:941:939
Extra
PDB:
ATOM 1 O3' C A 40 93.867 23.083 92.110 1.00 74.08 O
ATOM 2 P C A 41 92.680 22.025 91.882 1.00 74.63 P
ATOM 3 OP1 C A 41 93.125 21.046 90.852 1.00 74.70 O
ATOM 4 OP2 C A 41 91.419 22.790 91.677 1.00 74.52 O
ATOM 5 O5' C A 41 92.586 21.261 93.274 1.00 72.39 O
ATOM 6 C5' C A 41 91.415 20.528 93.611 1.00 71.66 C
ATOM 7 C4' C A 41 91.276 20.398 95.105 1.00 71.68 C
ATOM 8 O4' C A 41 91.398 21.690 95.750 1.00 73.00 O
ATOM 9 C3' C A 41 89.906 19.900 95.513 1.00 71.22 C
ATOM 10 O3' C A 41 89.865 18.493 95.414 1.00 69.92 O
ATOM 11 C2' C A 41 89.769 20.414 96.935 1.00 73.05 C
ATOM 12 O2' C A 41 90.443 19.603 97.875 1.00 74.77 O
ATOM 13 C1' C A 41 90.474 21.772 96.830 1.00 74.69 C
ATOM 14 N1 C A 41 89.577 22.932 96.599 1.00 77.41 N
ATOM 15 C2 C A 41 88.548 23.216 97.531 1.00 78.30 C
ATOM 16 O2 C A 41 88.393 22.472 98.514 1.00 79.22 O
ATOM 17 N3 C A 41 87.753 24.294 97.327 1.00 78.63 N
ATOM 18 C4 C A 41 87.940 25.070 96.254 1.00 78.63 C
ATOM 19 N4 C A 41 87.138 26.127 96.098 1.00 78.55 N
ATOM 20 C5 C A 41 88.958 24.799 95.293 1.00 78.10 C
ATOM 21 C6 C A 41 89.744 23.735 95.501 1.00 78.18 C
ATOM 22 P G A 42 89.147 17.818 94.155 1.00 69.47 P
ATOM 23 OP1 G A 42 89.133 16.351 94.364 1.00 70.76 O
ATOM 24 OP2 G A 42 89.732 18.366 92.904 1.00 70.05 O
ATOM 25 O5' G A 42 87.660 18.356 94.290 1.00 68.89 O
TER
ATOM 1 O3' U B 38 87.985 27.935 91.277 1.00 71.92 O
ATOM 2 P C B 39 89.024 28.550 92.339 1.00 71.49 P
ATOM 3 OP1 C B 39 89.459 27.478 93.257 1.00 74.29 O
ATOM 4 OP2 C B 39 88.349 29.748 92.891 1.00 71.81 O
ATOM 5 O5' C B 39 90.299 29.033 91.502 1.00 72.96 O
ATOM 6 C5' C B 39 90.333 28.938 90.069 1.00 72.68 C
ATOM 7 C4' C B 39 91.581 29.593 89.496 1.00 72.72 C
ATOM 8 O4' C B 39 91.675 30.982 89.901 1.00 72.24 O
ATOM 9 C3' C B 39 92.961 29.102 89.906 1.00 72.72 C
ATOM 10 O3' C B 39 93.306 27.854 89.305 1.00 73.41 O
ATOM 11 C2' C B 39 93.835 30.210 89.319 1.00 72.26 C
ATOM 12 O2' C B 39 93.999 30.076 87.920 1.00 72.69 O
ATOM 13 C1' C B 39 92.973 31.450 89.568 1.00 71.28 C
ATOM 14 N1 C B 39 93.491 32.317 90.640 1.00 70.56 N
ATOM 15 C2 C B 39 94.471 33.280 90.320 1.00 70.52 C
ATOM 16 O2 C B 39 94.872 33.376 89.153 1.00 71.72 O
ATOM 17 N3 C B 39 94.954 34.078 91.289 1.00 70.32 N
ATOM 18 C4 C B 39 94.504 33.956 92.536 1.00 70.78 C
ATOM 19 N4 C B 39 95.005 34.778 93.460 1.00 71.58 N
ATOM 20 C5 C B 39 93.517 32.989 92.893 1.00 71.16 C
ATOM 21 C6 C B 39 93.042 32.198 91.923 1.00 70.38 C
ATOM 22 P C B 40 94.673 27.103 89.729 1.00 73.37 P
ATOM 23 OP1 C B 40 95.766 28.099 89.882 1.00 72.03 O
ATOM 24 OP2 C B 40 94.849 25.970 88.786 1.00 72.95 O
ATOM 25 O5' C B 40 94.381 26.512 91.181 1.00 73.19 O
TER
ATOM 2 P C A 41 92.680 22.025 91.882 1.00 74.63 P
ATOM 3 OP1 C A 41 93.125 21.046 90.852 1.00 74.70 O
ATOM 4 OP2 C A 41 91.419 22.790 91.677 1.00 74.52 O
ATOM 5 O5' C A 41 92.586 21.261 93.274 1.00 72.39 O
ATOM 6 C5' C A 41 91.415 20.528 93.611 1.00 71.66 C
ATOM 7 C4' C A 41 91.276 20.398 95.105 1.00 71.68 C
ATOM 8 O4' C A 41 91.398 21.690 95.750 1.00 73.00 O
ATOM 9 C3' C A 41 89.906 19.900 95.513 1.00 71.22 C
ATOM 10 O3' C A 41 89.865 18.493 95.414 1.00 69.92 O
ATOM 11 C2' C A 41 89.769 20.414 96.935 1.00 73.05 C
ATOM 12 O2' C A 41 90.443 19.603 97.875 1.00 74.77 O
ATOM 13 C1' C A 41 90.474 21.772 96.830 1.00 74.69 C
ATOM 14 N1 C A 41 89.577 22.932 96.599 1.00 77.41 N
ATOM 15 C2 C A 41 88.548 23.216 97.531 1.00 78.30 C
ATOM 16 O2 C A 41 88.393 22.472 98.514 1.00 79.22 O
ATOM 17 N3 C A 41 87.753 24.294 97.327 1.00 78.63 N
ATOM 18 C4 C A 41 87.940 25.070 96.254 1.00 78.63 C
ATOM 19 N4 C A 41 87.138 26.127 96.098 1.00 78.55 N
ATOM 20 C5 C A 41 88.958 24.799 95.293 1.00 78.10 C
ATOM 21 C6 C A 41 89.744 23.735 95.501 1.00 78.18 C
ATOM 22 P G A 42 89.147 17.818 94.155 1.00 69.47 P
ATOM 23 OP1 G A 42 89.133 16.351 94.364 1.00 70.76 O
ATOM 24 OP2 G A 42 89.732 18.366 92.904 1.00 70.05 O
ATOM 25 O5' G A 42 87.660 18.356 94.290 1.00 68.89 O
TER
ATOM 1 O3' U B 38 87.985 27.935 91.277 1.00 71.92 O
ATOM 2 P C B 39 89.024 28.550 92.339 1.00 71.49 P
ATOM 3 OP1 C B 39 89.459 27.478 93.257 1.00 74.29 O
ATOM 4 OP2 C B 39 88.349 29.748 92.891 1.00 71.81 O
ATOM 5 O5' C B 39 90.299 29.033 91.502 1.00 72.96 O
ATOM 6 C5' C B 39 90.333 28.938 90.069 1.00 72.68 C
ATOM 7 C4' C B 39 91.581 29.593 89.496 1.00 72.72 C
ATOM 8 O4' C B 39 91.675 30.982 89.901 1.00 72.24 O
ATOM 9 C3' C B 39 92.961 29.102 89.906 1.00 72.72 C
ATOM 10 O3' C B 39 93.306 27.854 89.305 1.00 73.41 O
ATOM 11 C2' C B 39 93.835 30.210 89.319 1.00 72.26 C
ATOM 12 O2' C B 39 93.999 30.076 87.920 1.00 72.69 O
ATOM 13 C1' C B 39 92.973 31.450 89.568 1.00 71.28 C
ATOM 14 N1 C B 39 93.491 32.317 90.640 1.00 70.56 N
ATOM 15 C2 C B 39 94.471 33.280 90.320 1.00 70.52 C
ATOM 16 O2 C B 39 94.872 33.376 89.153 1.00 71.72 O
ATOM 17 N3 C B 39 94.954 34.078 91.289 1.00 70.32 N
ATOM 18 C4 C B 39 94.504 33.956 92.536 1.00 70.78 C
ATOM 19 N4 C B 39 95.005 34.778 93.460 1.00 71.58 N
ATOM 20 C5 C B 39 93.517 32.989 92.893 1.00 71.16 C
ATOM 21 C6 C B 39 93.042 32.198 91.923 1.00 70.38 C
ATOM 22 P C B 40 94.673 27.103 89.729 1.00 73.37 P
ATOM 23 OP1 C B 40 95.766 28.099 89.882 1.00 72.03 O
ATOM 24 OP2 C B 40 94.849 25.970 88.786 1.00 72.95 O
ATOM 25 O5' C B 40 94.381 26.512 91.181 1.00 73.19 O
TER
Atoms:
C2: (88.548,23.216,97.531)
OP1: (93.125,21.046,90.852)
OP2: (91.419,22.790,91.677)
C4: (87.940,25.070,96.254)
O5': (92.586,21.261,93.274)
C3': (89.906,19.900,95.513)
C1': (90.474,21.772,96.830)
O4': (91.398,21.690,95.750)
C5': (91.415,20.528,93.611)
P: (92.680,22.025,91.882)
O2: (88.393,22.472,98.514)
C4': (91.276,20.398,95.105)
C2': (89.769,20.414,96.935)
O2': (90.443,19.603,97.875)
N1: (89.577,22.932,96.599)
N3: (87.753,24.294,97.327)
N4: (87.138,26.127,96.098)
C6: (89.744,23.735,95.501)
C5: (88.958,24.799,95.293)
O3': (89.865,18.493,95.414)
OP1: (93.125,21.046,90.852)
OP2: (91.419,22.790,91.677)
C4: (87.940,25.070,96.254)
O5': (92.586,21.261,93.274)
C3': (89.906,19.900,95.513)
C1': (90.474,21.772,96.830)
O4': (91.398,21.690,95.750)
C5': (91.415,20.528,93.611)
P: (92.680,22.025,91.882)
O2: (88.393,22.472,98.514)
C4': (91.276,20.398,95.105)
C2': (89.769,20.414,96.935)
O2': (90.443,19.603,97.875)
N1: (89.577,22.932,96.599)
N3: (87.753,24.294,97.327)
N4: (87.138,26.127,96.098)
C6: (89.744,23.735,95.501)
C5: (88.958,24.799,95.293)
O3': (89.865,18.493,95.414)
C2: (94.471,33.280,90.320)
OP1: (89.459,27.478,93.257)
OP2: (88.349,29.748,92.891)
C4: (94.504,33.956,92.536)
O5': (90.299,29.033,91.502)
C3': (92.961,29.102,89.906)
C1': (92.973,31.450,89.568)
O4': (91.675,30.982,89.901)
C5': (90.333,28.938,90.069)
P: (89.024,28.550,92.339)
O2: (94.872,33.376,89.153)
C4': (91.581,29.593,89.496)
C2': (93.835,30.210,89.319)
O2': (93.999,30.076,87.920)
N1: (93.491,32.317,90.640)
N3: (94.954,34.078,91.289)
N4: (95.005,34.778,93.460)
C6: (93.042,32.198,91.923)
C5: (93.517,32.989,92.893)
O3': (93.306,27.854,89.305)
OP1: (89.459,27.478,93.257)
OP2: (88.349,29.748,92.891)
C4: (94.504,33.956,92.536)
O5': (90.299,29.033,91.502)
C3': (92.961,29.102,89.906)
C1': (92.973,31.450,89.568)
O4': (91.675,30.982,89.901)
C5': (90.333,28.938,90.069)
P: (89.024,28.550,92.339)
O2: (94.872,33.376,89.153)
C4': (91.581,29.593,89.496)
C2': (93.835,30.210,89.319)
O2': (93.999,30.076,87.920)
N1: (93.491,32.317,90.640)
N3: (94.954,34.078,91.289)
N4: (95.005,34.778,93.460)
C6: (93.042,32.198,91.923)
C5: (93.517,32.989,92.893)
O3': (93.306,27.854,89.305)
Image (generated by PyMOL):