Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A42:A356
Extra
PDB:
ATOM 1 O3' G A 41 -21.576 46.222 104.791 1.00 18.23 O
ATOM 2 P C A 42 -20.391 45.980 105.843 1.00 28.79 P
ATOM 3 OP1 C A 42 -19.095 45.921 105.095 1.00 0.79 O
ATOM 4 OP2 C A 42 -20.798 44.847 106.739 1.00 0.79 O
ATOM 5 O5' C A 42 -20.358 47.326 106.689 1.00 32.54 O
ATOM 6 C5' C A 42 -21.519 47.788 107.402 1.00 32.50 C
ATOM 7 C4' C A 42 -21.311 49.211 107.873 1.00 33.95 C
ATOM 8 O4' C A 42 -22.480 49.605 108.633 1.00 35.87 O
ATOM 9 C3' C A 42 -20.110 49.406 108.795 1.00 34.21 C
ATOM 10 O3' C A 42 -19.603 50.741 108.635 1.00 34.11 O
ATOM 11 C2' C A 42 -20.746 49.282 110.177 1.00 35.17 C
ATOM 12 O2' C A 42 -20.040 49.926 111.211 1.00 34.90 O
ATOM 13 C1' C A 42 -22.094 49.951 109.941 1.00 35.50 C
ATOM 14 N1 C A 42 -23.167 49.555 110.855 1.00 10.20 N
ATOM 15 C2 C A 42 -23.650 50.486 111.760 1.00 10.20 C
ATOM 16 O2 C A 42 -23.111 51.592 111.821 1.00 10.20 O
ATOM 17 N3 C A 42 -24.687 50.164 112.557 1.00 10.20 N
ATOM 18 C4 C A 42 -25.221 48.952 112.488 1.00 10.20 C
ATOM 19 N4 C A 42 -26.250 48.672 113.291 1.00 10.20 N
ATOM 20 C5 C A 42 -24.728 47.967 111.591 1.00 10.20 C
ATOM 21 C6 C A 42 -23.707 48.309 110.800 1.00 10.20 C
ATOM 22 P C A 43 -18.311 51.038 107.704 1.00 15.01 P
ATOM 23 OP1 C A 43 -17.837 49.786 107.064 1.00 70.32 O
ATOM 24 OP2 C A 43 -17.363 51.847 108.512 1.00 72.05 O
ATOM 25 O5' C A 43 -18.907 51.979 106.575 1.00 58.24 O
TER
ATOM 1 O3' U B 355 -26.279 44.873 109.465 1.00 12.79 O
ATOM 2 P C B 356 -26.729 44.472 110.941 1.00 41.88 P
ATOM 3 OP1 C B 356 -28.074 45.066 111.188 1.00 50.39 O
ATOM 4 OP2 C B 356 -25.596 44.763 111.876 1.00 49.89 O
ATOM 5 O5' C B 356 -26.904 42.893 110.851 1.00 31.81 O
ATOM 6 C5' C B 356 -28.155 42.308 110.429 1.00 32.28 C
ATOM 7 C4' C B 356 -27.956 40.870 109.975 1.00 33.04 C
ATOM 8 O4' C B 356 -27.205 40.823 108.734 1.00 33.05 O
ATOM 9 C3' C B 356 -27.255 39.922 110.937 1.00 34.13 C
ATOM 10 O3' C B 356 -28.048 39.068 111.784 1.00 36.57 O
ATOM 11 C2' C B 356 -25.917 39.558 110.292 1.00 33.39 C
ATOM 12 O2' C B 356 -25.580 38.200 110.461 1.00 33.73 O
ATOM 13 C1' C B 356 -26.180 39.849 108.814 1.00 33.27 C
ATOM 14 N1 C B 356 -25.014 40.385 108.090 1.00 35.98 N
ATOM 15 C2 C B 356 -24.086 39.506 107.520 1.00 35.35 C
ATOM 16 O2 C B 356 -24.242 38.287 107.656 1.00 35.72 O
ATOM 17 N3 C B 356 -23.038 40.009 106.832 1.00 34.69 N
ATOM 18 C4 C B 356 -22.895 41.329 106.705 1.00 33.90 C
ATOM 19 N4 C B 356 -21.851 41.786 106.016 1.00 32.66 N
ATOM 20 C5 C B 356 -23.815 42.240 107.280 1.00 34.50 C
ATOM 21 C6 C B 356 -24.847 41.732 107.960 1.00 35.62 C
ATOM 22 P U B 357 -29.074 37.994 111.152 1.00 71.86 P
ATOM 23 OP1 U B 357 -29.170 38.224 109.689 1.00 69.85 O
ATOM 24 OP2 U B 357 -30.310 38.032 111.981 1.00 70.51 O
ATOM 25 O5' U B 357 -28.370 36.584 111.402 1.00 11.32 O
TER
ATOM 2 P C A 42 -20.391 45.980 105.843 1.00 28.79 P
ATOM 3 OP1 C A 42 -19.095 45.921 105.095 1.00 0.79 O
ATOM 4 OP2 C A 42 -20.798 44.847 106.739 1.00 0.79 O
ATOM 5 O5' C A 42 -20.358 47.326 106.689 1.00 32.54 O
ATOM 6 C5' C A 42 -21.519 47.788 107.402 1.00 32.50 C
ATOM 7 C4' C A 42 -21.311 49.211 107.873 1.00 33.95 C
ATOM 8 O4' C A 42 -22.480 49.605 108.633 1.00 35.87 O
ATOM 9 C3' C A 42 -20.110 49.406 108.795 1.00 34.21 C
ATOM 10 O3' C A 42 -19.603 50.741 108.635 1.00 34.11 O
ATOM 11 C2' C A 42 -20.746 49.282 110.177 1.00 35.17 C
ATOM 12 O2' C A 42 -20.040 49.926 111.211 1.00 34.90 O
ATOM 13 C1' C A 42 -22.094 49.951 109.941 1.00 35.50 C
ATOM 14 N1 C A 42 -23.167 49.555 110.855 1.00 10.20 N
ATOM 15 C2 C A 42 -23.650 50.486 111.760 1.00 10.20 C
ATOM 16 O2 C A 42 -23.111 51.592 111.821 1.00 10.20 O
ATOM 17 N3 C A 42 -24.687 50.164 112.557 1.00 10.20 N
ATOM 18 C4 C A 42 -25.221 48.952 112.488 1.00 10.20 C
ATOM 19 N4 C A 42 -26.250 48.672 113.291 1.00 10.20 N
ATOM 20 C5 C A 42 -24.728 47.967 111.591 1.00 10.20 C
ATOM 21 C6 C A 42 -23.707 48.309 110.800 1.00 10.20 C
ATOM 22 P C A 43 -18.311 51.038 107.704 1.00 15.01 P
ATOM 23 OP1 C A 43 -17.837 49.786 107.064 1.00 70.32 O
ATOM 24 OP2 C A 43 -17.363 51.847 108.512 1.00 72.05 O
ATOM 25 O5' C A 43 -18.907 51.979 106.575 1.00 58.24 O
TER
ATOM 1 O3' U B 355 -26.279 44.873 109.465 1.00 12.79 O
ATOM 2 P C B 356 -26.729 44.472 110.941 1.00 41.88 P
ATOM 3 OP1 C B 356 -28.074 45.066 111.188 1.00 50.39 O
ATOM 4 OP2 C B 356 -25.596 44.763 111.876 1.00 49.89 O
ATOM 5 O5' C B 356 -26.904 42.893 110.851 1.00 31.81 O
ATOM 6 C5' C B 356 -28.155 42.308 110.429 1.00 32.28 C
ATOM 7 C4' C B 356 -27.956 40.870 109.975 1.00 33.04 C
ATOM 8 O4' C B 356 -27.205 40.823 108.734 1.00 33.05 O
ATOM 9 C3' C B 356 -27.255 39.922 110.937 1.00 34.13 C
ATOM 10 O3' C B 356 -28.048 39.068 111.784 1.00 36.57 O
ATOM 11 C2' C B 356 -25.917 39.558 110.292 1.00 33.39 C
ATOM 12 O2' C B 356 -25.580 38.200 110.461 1.00 33.73 O
ATOM 13 C1' C B 356 -26.180 39.849 108.814 1.00 33.27 C
ATOM 14 N1 C B 356 -25.014 40.385 108.090 1.00 35.98 N
ATOM 15 C2 C B 356 -24.086 39.506 107.520 1.00 35.35 C
ATOM 16 O2 C B 356 -24.242 38.287 107.656 1.00 35.72 O
ATOM 17 N3 C B 356 -23.038 40.009 106.832 1.00 34.69 N
ATOM 18 C4 C B 356 -22.895 41.329 106.705 1.00 33.90 C
ATOM 19 N4 C B 356 -21.851 41.786 106.016 1.00 32.66 N
ATOM 20 C5 C B 356 -23.815 42.240 107.280 1.00 34.50 C
ATOM 21 C6 C B 356 -24.847 41.732 107.960 1.00 35.62 C
ATOM 22 P U B 357 -29.074 37.994 111.152 1.00 71.86 P
ATOM 23 OP1 U B 357 -29.170 38.224 109.689 1.00 69.85 O
ATOM 24 OP2 U B 357 -30.310 38.032 111.981 1.00 70.51 O
ATOM 25 O5' U B 357 -28.370 36.584 111.402 1.00 11.32 O
TER
Atoms:
C2: (-23.650,50.486,111.760)
OP1: (-19.095,45.921,105.095)
OP2: (-20.798,44.847,106.739)
C4: (-25.221,48.952,112.488)
O5': (-20.358,47.326,106.689)
C3': (-20.110,49.406,108.795)
C1': (-22.094,49.951,109.941)
O4': (-22.480,49.605,108.633)
C5': (-21.519,47.788,107.402)
P: (-20.391,45.980,105.843)
O2: (-23.111,51.592,111.821)
C4': (-21.311,49.211,107.873)
C2': (-20.746,49.282,110.177)
O2': (-20.040,49.926,111.211)
N1: (-23.167,49.555,110.855)
N3: (-24.687,50.164,112.557)
N4: (-26.250,48.672,113.291)
C6: (-23.707,48.309,110.800)
C5: (-24.728,47.967,111.591)
O3': (-19.603,50.741,108.635)
OP1: (-19.095,45.921,105.095)
OP2: (-20.798,44.847,106.739)
C4: (-25.221,48.952,112.488)
O5': (-20.358,47.326,106.689)
C3': (-20.110,49.406,108.795)
C1': (-22.094,49.951,109.941)
O4': (-22.480,49.605,108.633)
C5': (-21.519,47.788,107.402)
P: (-20.391,45.980,105.843)
O2: (-23.111,51.592,111.821)
C4': (-21.311,49.211,107.873)
C2': (-20.746,49.282,110.177)
O2': (-20.040,49.926,111.211)
N1: (-23.167,49.555,110.855)
N3: (-24.687,50.164,112.557)
N4: (-26.250,48.672,113.291)
C6: (-23.707,48.309,110.800)
C5: (-24.728,47.967,111.591)
O3': (-19.603,50.741,108.635)
C2: (-24.086,39.506,107.520)
OP1: (-28.074,45.066,111.188)
OP2: (-25.596,44.763,111.876)
C4: (-22.895,41.329,106.705)
O5': (-26.904,42.893,110.851)
C3': (-27.255,39.922,110.937)
C1': (-26.180,39.849,108.814)
O4': (-27.205,40.823,108.734)
C5': (-28.155,42.308,110.429)
P: (-26.729,44.472,110.941)
O2: (-24.242,38.287,107.656)
C4': (-27.956,40.870,109.975)
C2': (-25.917,39.558,110.292)
O2': (-25.580,38.200,110.461)
N1: (-25.014,40.385,108.090)
N3: (-23.038,40.009,106.832)
N4: (-21.851,41.786,106.016)
C6: (-24.847,41.732,107.960)
C5: (-23.815,42.240,107.280)
O3': (-28.048,39.068,111.784)
OP1: (-28.074,45.066,111.188)
OP2: (-25.596,44.763,111.876)
C4: (-22.895,41.329,106.705)
O5': (-26.904,42.893,110.851)
C3': (-27.255,39.922,110.937)
C1': (-26.180,39.849,108.814)
O4': (-27.205,40.823,108.734)
C5': (-28.155,42.308,110.429)
P: (-26.729,44.472,110.941)
O2: (-24.242,38.287,107.656)
C4': (-27.956,40.870,109.975)
C2': (-25.917,39.558,110.292)
O2': (-25.580,38.200,110.461)
N1: (-25.014,40.385,108.090)
N3: (-23.038,40.009,106.832)
N4: (-21.851,41.786,106.016)
C6: (-24.847,41.732,107.960)
C5: (-23.815,42.240,107.280)
O3': (-28.048,39.068,111.784)
Image (generated by PyMOL):