ClaRNA

Doublet info:

Details

Nucleotide types: CC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J02:A42:A356

Extra

PDB:
ATOM 1 O3' G A 41 -75.703 8.749 -65.959 1.00 33.90 O
ATOM 2 P C A 42 -74.538 7.692 -66.256 1.00 31.32 P
ATOM 3 OP1 C A 42 -73.240 8.409 -66.337 1.00 2.94 O
ATOM 4 OP2 C A 42 -74.982 6.856 -67.402 1.00 2.94 O
ATOM 5 O5' C A 42 -74.482 6.814 -64.928 1.00 12.07 O
ATOM 6 C5' C A 42 -75.646 6.131 -64.434 1.00 12.03 C
ATOM 7 C4' C A 42 -75.403 5.635 -63.026 1.00 13.48 C
ATOM 8 O4' C A 42 -76.574 4.889 -62.607 1.00 15.40 O
ATOM 9 C3' C A 42 -74.213 4.689 -62.872 1.00 13.74 C
ATOM 10 O3' C A 42 -73.689 4.816 -61.551 1.00 13.64 O
ATOM 11 C2' C A 42 -74.865 3.313 -62.984 1.00 14.70 C
ATOM 12 O2' C A 42 -74.136 2.280 -62.360 1.00 14.43 O
ATOM 13 C1' C A 42 -76.203 3.561 -62.287 1.00 15.03 C
ATOM 14 N1 C A 42 -77.310 2.669 -62.674 1.00 19.69 N
ATOM 15 C2 C A 42 -77.787 1.743 -61.747 1.00 19.69 C
ATOM 16 O2 C A 42 -77.236 1.656 -60.649 1.00 19.69 O
ATOM 17 N3 C A 42 -78.832 0.963 -62.069 1.00 19.69 N
ATOM 18 C4 C A 42 -79.394 1.068 -63.274 1.00 19.69 C
ATOM 19 N4 C A 42 -80.430 0.271 -63.557 1.00 19.69 N
ATOM 20 C5 C A 42 -78.919 1.989 -64.249 1.00 19.69 C
ATOM 21 C6 C A 42 -77.882 2.761 -63.912 1.00 19.69 C
ATOM 22 P C A 43 -72.386 5.715 -61.263 1.00 28.07 P
ATOM 23 OP1 C A 43 -71.928 6.375 -62.517 1.00 83.38 O
ATOM 24 OP2 C A 43 -71.422 4.892 -60.475 1.00 85.11 O
ATOM 25 O5' C A 43 -72.961 6.836 -60.290 1.00 8.53 O
TER

ATOM 1 O3' U B 355 -80.430 4.104 -67.267 1.00 16.49 O
ATOM 2 P C B 356 -80.932 2.649 -67.697 1.00 55.74 P
ATOM 3 OP1 C B 356 -82.267 2.420 -67.072 1.00 64.25 O
ATOM 4 OP2 C B 356 -79.821 1.702 -67.433 1.00 63.75 O
ATOM 5 O5' C B 356 -81.120 2.790 -69.276 1.00 6.01 O
ATOM 6 C5' C B 356 -82.380 3.210 -69.834 1.00 6.48 C
ATOM 7 C4' C B 356 -82.203 3.684 -71.261 1.00 7.24 C
ATOM 8 O4' C B 356 -81.435 4.916 -71.292 1.00 7.25 O
ATOM 9 C3' C B 356 -81.530 2.734 -72.236 1.00 8.33 C
ATOM 10 O3' C B 356 -82.345 1.918 -73.095 1.00 10.77 O
ATOM 11 C2' C B 356 -80.201 3.379 -72.624 1.00 7.59 C
ATOM 12 O2' C B 356 -79.926 3.237 -73.998 1.00 7.93 O
ATOM 13 C1' C B 356 -80.445 4.855 -72.300 1.00 7.47 C
ATOM 14 N1 C B 356 -79.265 5.564 -71.783 1.00 30.36 N
ATOM 15 C2 C B 356 -78.350 6.138 -72.675 1.00 29.73 C
ATOM 16 O2 C B 356 -78.529 6.014 -73.896 1.00 30.10 O
ATOM 17 N3 C B 356 -77.288 6.812 -72.183 1.00 29.07 N
ATOM 18 C4 C B 356 -77.115 6.909 -70.865 1.00 28.28 C
ATOM 19 N4 C B 356 -76.051 7.566 -70.419 1.00 27.04 N
ATOM 20 C5 C B 356 -78.024 6.332 -69.941 1.00 28.88 C
ATOM 21 C6 C B 356 -79.070 5.673 -70.438 1.00 30.00 C
ATOM 22 P U B 357 -83.394 2.582 -74.125 1.00 65.78 P
ATOM 23 OP1 U B 357 -83.473 4.037 -73.876 1.00 63.77 O
ATOM 24 OP2 U B 357 -84.638 1.773 -74.082 1.00 64.43 O
ATOM 25 O5' U B 357 -82.724 2.346 -75.550 1.00 43.53 O
TER

Atoms:
C2: (-77.787,1.743,-61.747)
OP1: (-73.240,8.409,-66.337)
OP2: (-74.982,6.856,-67.402)
C4: (-79.394,1.068,-63.274)
O5': (-74.482,6.814,-64.928)
C3': (-74.213,4.689,-62.872)
C1': (-76.203,3.561,-62.287)
O4': (-76.574,4.889,-62.607)
C5': (-75.646,6.131,-64.434)
P: (-74.538,7.692,-66.256)
O2: (-77.236,1.656,-60.649)
C4': (-75.403,5.635,-63.026)
C2': (-74.865,3.313,-62.984)
O2': (-74.136,2.280,-62.360)
N1: (-77.310,2.669,-62.674)
N3: (-78.832,0.963,-62.069)
N4: (-80.430,0.271,-63.557)
C6: (-77.882,2.761,-63.912)
C5: (-78.919,1.989,-64.249)
O3': (-73.689,4.816,-61.551)
C2: (-78.350,6.138,-72.675)
OP1: (-82.267,2.420,-67.072)
OP2: (-79.821,1.702,-67.433)
C4: (-77.115,6.909,-70.865)
O5': (-81.120,2.790,-69.276)
C3': (-81.530,2.734,-72.236)
C1': (-80.445,4.855,-72.300)
O4': (-81.435,4.916,-71.292)
C5': (-82.380,3.210,-69.834)
P: (-80.932,2.649,-67.697)
O2: (-78.529,6.014,-73.896)
C4': (-82.203,3.684,-71.261)
C2': (-80.201,3.379,-72.624)
O2': (-79.926,3.237,-73.998)
N1: (-79.265,5.564,-71.783)
N3: (-77.288,6.812,-72.183)
N4: (-76.051,7.566,-70.419)
C6: (-79.070,5.673,-70.438)
C5: (-78.024,6.332,-69.941)
O3': (-82.345,1.918,-73.095)
Image (generated by PyMOL):
PyMOL image
show in jmol