ClaRNA

Doublet info:

Details

Nucleotide types: CC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQE:A42:A356

Extra

PDB:
ATOM 1 O3' G A 41 143.826 72.237 11.130 1.00 38.60 O
ATOM 2 P C A 42 143.071 70.867 10.813 1.00 38.46 P
ATOM 3 OP1 C A 42 141.735 71.203 10.226 1.00 38.44 O
ATOM 4 OP2 C A 42 143.149 70.053 12.047 1.00 38.79 O
ATOM 5 O5' C A 42 143.949 70.217 9.651 1.00 39.96 O
ATOM 6 C5' C A 42 145.298 69.786 9.882 1.00 39.65 C
ATOM 7 C4' C A 42 146.034 69.611 8.567 1.00 40.81 C
ATOM 8 O4' C A 42 147.386 69.192 8.881 1.00 42.31 O
ATOM 9 C3' C A 42 145.472 68.566 7.593 1.00 40.94 C
ATOM 10 O3' C A 42 145.796 68.902 6.240 1.00 41.12 O
ATOM 11 C2' C A 42 146.320 67.334 7.890 1.00 41.47 C
ATOM 12 O2' C A 42 146.465 66.482 6.768 1.00 41.59 O
ATOM 13 C1' C A 42 147.664 67.977 8.224 1.00 41.49 C
ATOM 14 N1 C A 42 148.556 67.181 9.074 1.00 41.07 N
ATOM 15 C2 C A 42 149.796 66.839 8.562 1.00 40.50 C
ATOM 16 O2 C A 42 150.081 67.198 7.413 1.00 40.25 O
ATOM 17 N3 C A 42 150.656 66.127 9.322 1.00 40.34 N
ATOM 18 C4 C A 42 150.306 65.757 10.552 1.00 39.73 C
ATOM 19 N4 C A 42 151.194 65.068 11.265 1.00 40.79 N
ATOM 20 C5 C A 42 149.032 66.082 11.105 1.00 40.40 C
ATOM 21 C6 C A 42 148.194 66.789 10.337 1.00 41.40 C
ATOM 22 P C A 43 144.983 70.039 5.451 1.00 41.80 P
ATOM 23 OP1 C A 43 143.719 70.338 6.198 1.00 42.51 O
ATOM 24 OP2 C A 43 144.909 69.624 4.029 1.00 43.83 O
ATOM 25 O5' C A 43 145.957 71.270 5.519 1.00 41.21 O
TER

ATOM 1 O3' U B 355 148.204 68.414 15.176 1.00 43.99 O
ATOM 2 P C B 356 148.217 66.824 15.392 1.00 43.78 P
ATOM 3 OP1 C B 356 149.653 66.418 15.506 1.00 43.40 O
ATOM 4 OP2 C B 356 147.338 66.207 14.348 1.00 43.29 O
ATOM 5 O5' C B 356 147.552 66.674 16.817 1.00 41.73 O
ATOM 6 C5' C B 356 148.164 67.280 17.963 1.00 42.67 C
ATOM 7 C4' C B 356 147.173 67.382 19.092 1.00 43.80 C
ATOM 8 O4' C B 356 146.233 68.456 18.844 1.00 43.58 O
ATOM 9 C3' C B 356 146.357 66.131 19.358 1.00 44.94 C
ATOM 10 O3' C B 356 146.710 65.366 20.543 1.00 47.78 O
ATOM 11 C2' C B 356 144.929 66.460 18.919 1.00 43.76 C
ATOM 12 O2' C B 356 143.947 65.904 19.768 1.00 43.92 O
ATOM 13 C1' C B 356 144.896 67.992 18.965 1.00 43.24 C
ATOM 14 N1 C B 356 144.115 68.601 17.851 1.00 41.72 N
ATOM 15 C2 C B 356 142.756 68.972 18.043 1.00 40.60 C
ATOM 16 O2 C B 356 142.210 68.758 19.129 1.00 41.53 O
ATOM 17 N3 C B 356 142.082 69.555 17.023 1.00 39.07 N
ATOM 18 C4 C B 356 142.694 69.767 15.853 1.00 38.43 C
ATOM 19 N4 C B 356 142.006 70.367 14.884 1.00 36.18 N
ATOM 20 C5 C B 356 144.047 69.383 15.626 1.00 39.12 C
ATOM 21 C6 C B 356 144.712 68.812 16.638 1.00 40.92 C
ATOM 22 P U B 357 146.428 65.944 22.020 1.00 49.08 P
ATOM 23 OP1 U B 357 146.117 67.406 21.904 1.00 50.56 O
ATOM 24 OP2 U B 357 147.572 65.508 22.839 1.00 51.08 O
ATOM 25 O5' U B 357 145.135 65.175 22.523 1.00 46.54 O
TER

Atoms:
C2: (149.796,66.839,8.562)
OP1: (141.735,71.203,10.226)
OP2: (143.149,70.053,12.047)
C4: (150.306,65.757,10.552)
O5': (143.949,70.217,9.651)
C3': (145.472,68.566,7.593)
C1': (147.664,67.977,8.224)
O4': (147.386,69.192,8.881)
C5': (145.298,69.786,9.882)
P: (143.071,70.867,10.813)
O2: (150.081,67.198,7.413)
C4': (146.034,69.611,8.567)
C2': (146.320,67.334,7.890)
O2': (146.465,66.482,6.768)
N1: (148.556,67.181,9.074)
N3: (150.656,66.127,9.322)
N4: (151.194,65.068,11.265)
C6: (148.194,66.789,10.337)
C5: (149.032,66.082,11.105)
O3': (145.796,68.902,6.240)
C2: (142.756,68.972,18.043)
OP1: (149.653,66.418,15.506)
OP2: (147.338,66.207,14.348)
C4: (142.694,69.767,15.853)
O5': (147.552,66.674,16.817)
C3': (146.357,66.131,19.358)
C1': (144.896,67.992,18.965)
O4': (146.233,68.456,18.844)
C5': (148.164,67.280,17.963)
P: (148.217,66.824,15.392)
O2: (142.210,68.758,19.129)
C4': (147.173,67.382,19.092)
C2': (144.929,66.460,18.919)
O2': (143.947,65.904,19.768)
N1: (144.115,68.601,17.851)
N3: (142.082,69.555,17.023)
N4: (142.006,70.367,14.884)
C6: (144.712,68.812,16.638)
C5: (144.047,69.383,15.626)
O3': (146.710,65.366,20.543)
Image (generated by PyMOL):
PyMOL image
show in jmol