Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A2659:A2655
Extra
PDB:
ATOM 1 O3' C A2658 133.047 -73.724 51.977 1.00 73.84 O
ATOM 2 P A A2659 131.475 -73.963 52.157 1.00 71.93 P
ATOM 3 OP1 A A2659 131.051 -73.164 53.342 1.00 81.67 O
ATOM 4 OP2 A A2659 131.256 -75.432 52.129 1.00 59.46 O
ATOM 5 O5' A A2659 130.862 -73.299 50.847 1.00 64.99 O
ATOM 6 C5' A A2659 130.976 -71.897 50.624 1.00 68.51 C
ATOM 7 C4' A A2659 130.560 -71.536 49.218 1.00 69.40 C
ATOM 8 O4' A A2659 131.484 -72.149 48.282 1.00 71.52 O
ATOM 9 C3' A A2659 129.196 -72.004 48.740 1.00 72.17 C
ATOM 10 O3' A A2659 128.102 -71.216 49.178 1.00 65.42 O
ATOM 11 C2' A A2659 129.359 -71.982 47.228 1.00 76.05 C
ATOM 12 O2' A A2659 129.179 -70.679 46.691 1.00 77.72 O
ATOM 13 C1' A A2659 130.805 -72.463 47.073 1.00 73.78 C
ATOM 14 N9 A A2659 130.885 -73.916 46.866 1.00 68.96 N
ATOM 15 C8 A A2659 131.228 -74.874 47.787 1.00 65.95 C
ATOM 16 N7 A A2659 131.227 -76.093 47.306 1.00 65.17 N
ATOM 17 C5 A A2659 130.856 -75.931 45.979 1.00 59.44 C
ATOM 18 C6 A A2659 130.686 -76.845 44.933 1.00 59.87 C
ATOM 19 N6 A A2659 130.880 -78.156 45.061 1.00 63.80 N
ATOM 20 N1 A A2659 130.308 -76.362 43.733 1.00 63.27 N
ATOM 21 C2 A A2659 130.116 -75.050 43.603 1.00 67.38 C
ATOM 22 N3 A A2659 130.248 -74.087 44.509 1.00 70.56 N
ATOM 23 C4 A A2659 130.631 -74.598 45.694 1.00 66.63 C
ATOM 24 P U A2660 126.673 -71.924 49.367 1.00 65.25 P
ATOM 25 OP1 U A2660 125.669 -70.962 49.888 1.00 63.21 O
ATOM 26 OP2 U A2660 126.938 -73.177 50.119 1.00 65.79 O
ATOM 27 O5' U A2660 126.262 -72.367 47.890 1.00 69.29 O
TER
ATOM 1 O3' A B2654 132.488 -83.571 45.568 1.00 49.90 O
ATOM 2 P A B2655 133.890 -82.959 45.053 1.00 47.54 P
ATOM 3 OP1 A B2655 134.939 -83.948 45.393 1.00 56.14 O
ATOM 4 OP2 A B2655 134.009 -81.572 45.568 1.00 57.90 O
ATOM 5 O5' A B2655 133.752 -82.923 43.459 1.00 55.52 O
ATOM 6 C5' A B2655 133.647 -84.144 42.730 1.00 59.74 C
ATOM 7 C4' A B2655 133.127 -83.913 41.333 1.00 64.07 C
ATOM 8 O4' A B2655 131.774 -83.424 41.394 1.00 62.15 O
ATOM 9 C3' A B2655 133.851 -82.910 40.458 1.00 66.63 C
ATOM 10 O3' A B2655 134.978 -83.471 39.815 1.00 69.00 O
ATOM 11 C2' A B2655 132.793 -82.536 39.433 1.00 69.42 C
ATOM 12 O2' A B2655 132.709 -83.456 38.363 1.00 70.83 O
ATOM 13 C1' A B2655 131.520 -82.609 40.269 1.00 65.28 C
ATOM 14 N9 A B2655 131.088 -81.297 40.732 1.00 59.92 N
ATOM 15 C8 A B2655 131.257 -80.721 41.963 1.00 66.67 C
ATOM 16 N7 A B2655 130.724 -79.529 42.064 1.00 69.93 N
ATOM 17 C5 A B2655 130.172 -79.307 40.814 1.00 69.25 C
ATOM 18 C6 A B2655 129.469 -78.226 40.276 1.00 67.84 C
ATOM 19 N6 A B2655 129.187 -77.121 40.962 1.00 67.17 N
ATOM 20 N1 A B2655 129.062 -78.313 38.992 1.00 69.66 N
ATOM 21 C2 A B2655 129.357 -79.421 38.304 1.00 72.25 C
ATOM 22 N3 A B2655 130.017 -80.507 38.702 1.00 75.14 N
ATOM 23 C4 A B2655 130.398 -80.384 39.983 1.00 67.67 C
ATOM 24 P A B2656 136.340 -82.633 39.764 1.00 67.33 P
ATOM 25 OP1 A B2656 136.228 -81.522 38.792 1.00 70.49 O
ATOM 26 OP2 A B2656 137.442 -83.620 39.640 1.00 60.88 O
ATOM 27 O5' A B2656 136.404 -81.929 41.190 1.00 64.49 O
TER
ATOM 2 P A A2659 131.475 -73.963 52.157 1.00 71.93 P
ATOM 3 OP1 A A2659 131.051 -73.164 53.342 1.00 81.67 O
ATOM 4 OP2 A A2659 131.256 -75.432 52.129 1.00 59.46 O
ATOM 5 O5' A A2659 130.862 -73.299 50.847 1.00 64.99 O
ATOM 6 C5' A A2659 130.976 -71.897 50.624 1.00 68.51 C
ATOM 7 C4' A A2659 130.560 -71.536 49.218 1.00 69.40 C
ATOM 8 O4' A A2659 131.484 -72.149 48.282 1.00 71.52 O
ATOM 9 C3' A A2659 129.196 -72.004 48.740 1.00 72.17 C
ATOM 10 O3' A A2659 128.102 -71.216 49.178 1.00 65.42 O
ATOM 11 C2' A A2659 129.359 -71.982 47.228 1.00 76.05 C
ATOM 12 O2' A A2659 129.179 -70.679 46.691 1.00 77.72 O
ATOM 13 C1' A A2659 130.805 -72.463 47.073 1.00 73.78 C
ATOM 14 N9 A A2659 130.885 -73.916 46.866 1.00 68.96 N
ATOM 15 C8 A A2659 131.228 -74.874 47.787 1.00 65.95 C
ATOM 16 N7 A A2659 131.227 -76.093 47.306 1.00 65.17 N
ATOM 17 C5 A A2659 130.856 -75.931 45.979 1.00 59.44 C
ATOM 18 C6 A A2659 130.686 -76.845 44.933 1.00 59.87 C
ATOM 19 N6 A A2659 130.880 -78.156 45.061 1.00 63.80 N
ATOM 20 N1 A A2659 130.308 -76.362 43.733 1.00 63.27 N
ATOM 21 C2 A A2659 130.116 -75.050 43.603 1.00 67.38 C
ATOM 22 N3 A A2659 130.248 -74.087 44.509 1.00 70.56 N
ATOM 23 C4 A A2659 130.631 -74.598 45.694 1.00 66.63 C
ATOM 24 P U A2660 126.673 -71.924 49.367 1.00 65.25 P
ATOM 25 OP1 U A2660 125.669 -70.962 49.888 1.00 63.21 O
ATOM 26 OP2 U A2660 126.938 -73.177 50.119 1.00 65.79 O
ATOM 27 O5' U A2660 126.262 -72.367 47.890 1.00 69.29 O
TER
ATOM 1 O3' A B2654 132.488 -83.571 45.568 1.00 49.90 O
ATOM 2 P A B2655 133.890 -82.959 45.053 1.00 47.54 P
ATOM 3 OP1 A B2655 134.939 -83.948 45.393 1.00 56.14 O
ATOM 4 OP2 A B2655 134.009 -81.572 45.568 1.00 57.90 O
ATOM 5 O5' A B2655 133.752 -82.923 43.459 1.00 55.52 O
ATOM 6 C5' A B2655 133.647 -84.144 42.730 1.00 59.74 C
ATOM 7 C4' A B2655 133.127 -83.913 41.333 1.00 64.07 C
ATOM 8 O4' A B2655 131.774 -83.424 41.394 1.00 62.15 O
ATOM 9 C3' A B2655 133.851 -82.910 40.458 1.00 66.63 C
ATOM 10 O3' A B2655 134.978 -83.471 39.815 1.00 69.00 O
ATOM 11 C2' A B2655 132.793 -82.536 39.433 1.00 69.42 C
ATOM 12 O2' A B2655 132.709 -83.456 38.363 1.00 70.83 O
ATOM 13 C1' A B2655 131.520 -82.609 40.269 1.00 65.28 C
ATOM 14 N9 A B2655 131.088 -81.297 40.732 1.00 59.92 N
ATOM 15 C8 A B2655 131.257 -80.721 41.963 1.00 66.67 C
ATOM 16 N7 A B2655 130.724 -79.529 42.064 1.00 69.93 N
ATOM 17 C5 A B2655 130.172 -79.307 40.814 1.00 69.25 C
ATOM 18 C6 A B2655 129.469 -78.226 40.276 1.00 67.84 C
ATOM 19 N6 A B2655 129.187 -77.121 40.962 1.00 67.17 N
ATOM 20 N1 A B2655 129.062 -78.313 38.992 1.00 69.66 N
ATOM 21 C2 A B2655 129.357 -79.421 38.304 1.00 72.25 C
ATOM 22 N3 A B2655 130.017 -80.507 38.702 1.00 75.14 N
ATOM 23 C4 A B2655 130.398 -80.384 39.983 1.00 67.67 C
ATOM 24 P A B2656 136.340 -82.633 39.764 1.00 67.33 P
ATOM 25 OP1 A B2656 136.228 -81.522 38.792 1.00 70.49 O
ATOM 26 OP2 A B2656 137.442 -83.620 39.640 1.00 60.88 O
ATOM 27 O5' A B2656 136.404 -81.929 41.190 1.00 64.49 O
TER
Atoms:
OP1: (131.051,-73.164,53.342)
OP2: (131.256,-75.432,52.129)
C3': (129.196,-72.004,48.740)
C1': (130.805,-72.463,47.073)
C5': (130.976,-71.897,50.624)
O4': (131.484,-72.149,48.282)
C8: (131.228,-74.874,47.787)
O2': (129.179,-70.679,46.691)
C6: (130.686,-76.845,44.933)
C5: (130.856,-75.931,45.979)
C4: (130.631,-74.598,45.694)
P: (131.475,-73.963,52.157)
C4': (130.560,-71.536,49.218)
C2': (129.359,-71.982,47.228)
C2: (130.116,-75.050,43.603)
N1: (130.308,-76.362,43.733)
N3: (130.248,-74.087,44.509)
N6: (130.880,-78.156,45.061)
N7: (131.227,-76.093,47.306)
N9: (130.885,-73.916,46.866)
O5': (130.862,-73.299,50.847)
O3': (128.102,-71.216,49.178)
OP2: (131.256,-75.432,52.129)
C3': (129.196,-72.004,48.740)
C1': (130.805,-72.463,47.073)
C5': (130.976,-71.897,50.624)
O4': (131.484,-72.149,48.282)
C8: (131.228,-74.874,47.787)
O2': (129.179,-70.679,46.691)
C6: (130.686,-76.845,44.933)
C5: (130.856,-75.931,45.979)
C4: (130.631,-74.598,45.694)
P: (131.475,-73.963,52.157)
C4': (130.560,-71.536,49.218)
C2': (129.359,-71.982,47.228)
C2: (130.116,-75.050,43.603)
N1: (130.308,-76.362,43.733)
N3: (130.248,-74.087,44.509)
N6: (130.880,-78.156,45.061)
N7: (131.227,-76.093,47.306)
N9: (130.885,-73.916,46.866)
O5': (130.862,-73.299,50.847)
O3': (128.102,-71.216,49.178)
OP1: (134.939,-83.948,45.393)
OP2: (134.009,-81.572,45.568)
C3': (133.851,-82.910,40.458)
C1': (131.520,-82.609,40.269)
C5': (133.647,-84.144,42.730)
O4': (131.774,-83.424,41.394)
C8: (131.257,-80.721,41.963)
O2': (132.709,-83.456,38.363)
C6: (129.469,-78.226,40.276)
C5: (130.172,-79.307,40.814)
C4: (130.398,-80.384,39.983)
P: (133.890,-82.959,45.053)
C4': (133.127,-83.913,41.333)
C2': (132.793,-82.536,39.433)
C2: (129.357,-79.421,38.304)
N1: (129.062,-78.313,38.992)
N3: (130.017,-80.507,38.702)
N6: (129.187,-77.121,40.962)
N7: (130.724,-79.529,42.064)
N9: (131.088,-81.297,40.732)
O5': (133.752,-82.923,43.459)
O3': (134.978,-83.471,39.815)
OP2: (134.009,-81.572,45.568)
C3': (133.851,-82.910,40.458)
C1': (131.520,-82.609,40.269)
C5': (133.647,-84.144,42.730)
O4': (131.774,-83.424,41.394)
C8: (131.257,-80.721,41.963)
O2': (132.709,-83.456,38.363)
C6: (129.469,-78.226,40.276)
C5: (130.172,-79.307,40.814)
C4: (130.398,-80.384,39.983)
P: (133.890,-82.959,45.053)
C4': (133.127,-83.913,41.333)
C2': (132.793,-82.536,39.433)
C2: (129.357,-79.421,38.304)
N1: (129.062,-78.313,38.992)
N3: (130.017,-80.507,38.702)
N6: (129.187,-77.121,40.962)
N7: (130.724,-79.529,42.064)
N9: (131.088,-81.297,40.732)
O5': (133.752,-82.923,43.459)
O3': (134.978,-83.471,39.815)
Image (generated by PyMOL):