ClaRNA

Doublet info:

Details

Nucleotide types: CC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNH:A42:A347

Extra

PDB:
ATOM 1 O3' G A 41 74.574 8.358 66.971 1.00 73.39 O
ATOM 2 P C A 42 73.767 7.016 67.309 1.00 71.16 P
ATOM 3 OP1 C A 42 72.404 7.404 67.780 1.00 69.70 O
ATOM 4 OP2 C A 42 74.654 6.208 68.192 1.00 61.40 O
ATOM 5 O5' C A 42 73.636 6.259 65.908 1.00 72.91 O
ATOM 6 C5' C A 42 74.565 5.235 65.549 1.00 73.93 C
ATOM 7 C4' C A 42 74.543 4.992 64.055 1.00 72.40 C
ATOM 8 O4' C A 42 75.776 4.336 63.661 1.00 77.84 O
ATOM 9 C3' C A 42 73.411 4.133 63.511 1.00 69.96 C
ATOM 10 O3' C A 42 73.035 4.646 62.237 1.00 72.07 O
ATOM 11 C2' C A 42 74.055 2.758 63.353 1.00 72.71 C
ATOM 12 O2' C A 42 73.486 1.948 62.347 1.00 75.95 O
ATOM 13 C1' C A 42 75.487 3.136 62.976 1.00 74.91 C
ATOM 14 N1 C A 42 76.486 2.140 63.384 1.00 74.98 N
ATOM 15 C2 C A 42 77.003 1.247 62.434 1.00 76.70 C
ATOM 16 O2 C A 42 76.590 1.283 61.255 1.00 71.07 O
ATOM 17 N3 C A 42 77.941 0.359 62.830 1.00 76.58 N
ATOM 18 C4 C A 42 78.355 0.334 64.101 1.00 77.57 C
ATOM 19 N4 C A 42 79.270 -0.569 64.447 1.00 83.42 N
ATOM 20 C5 C A 42 77.842 1.227 65.075 1.00 77.81 C
ATOM 21 C6 C A 42 76.917 2.099 64.679 1.00 74.10 C
ATOM 22 P C A 43 71.655 5.439 62.089 1.00 75.96 P
ATOM 23 OP1 C A 43 71.404 6.037 63.427 1.00 72.44 O
ATOM 24 OP2 C A 43 70.674 4.480 61.509 1.00 70.87 O
ATOM 25 O5' C A 43 71.949 6.615 61.055 1.00 71.89 O
TER

ATOM 1 O3' U B 346 80.412 3.666 68.380 1.00 68.85 O
ATOM 2 P C B 347 79.820 2.224 68.788 1.00 61.11 P
ATOM 3 OP1 C B 347 80.537 1.190 68.010 1.00 60.89 O
ATOM 4 OP2 C B 347 78.338 2.303 68.695 1.00 65.10 O
ATOM 5 O5' C B 347 80.189 2.088 70.336 1.00 55.36 O
ATOM 6 C5' C B 347 81.497 2.417 70.833 1.00 66.77 C
ATOM 7 C4' C B 347 81.445 2.810 72.311 1.00 68.03 C
ATOM 8 O4' C B 347 80.754 4.076 72.446 1.00 66.83 O
ATOM 9 C3' C B 347 80.814 1.852 73.327 1.00 73.58 C
ATOM 10 O3' C B 347 81.681 1.167 74.250 1.00 71.37 O
ATOM 11 C2' C B 347 79.531 2.524 73.822 1.00 71.55 C
ATOM 12 O2' C B 347 79.374 2.495 75.226 1.00 78.34 O
ATOM 13 C1' C B 347 79.705 3.979 73.394 1.00 66.10 C
ATOM 14 N1 C B 347 78.476 4.509 72.766 1.00 67.56 N
ATOM 15 C2 C B 347 77.395 4.899 73.583 1.00 71.51 C
ATOM 16 O2 C B 347 77.474 4.739 74.817 1.00 72.06 O
ATOM 17 N3 C B 347 76.290 5.429 72.995 1.00 71.80 N
ATOM 18 C4 C B 347 76.233 5.557 71.658 1.00 69.82 C
ATOM 19 N4 C B 347 75.134 6.084 71.117 1.00 74.97 N
ATOM 20 C5 C B 347 77.305 5.147 70.816 1.00 68.16 C
ATOM 21 C6 C B 347 78.392 4.634 71.403 1.00 70.22 C
ATOM 22 P U B 348 82.467 1.974 75.405 1.00 77.14 P
ATOM 23 OP1 U B 348 82.058 3.396 75.394 1.00 76.46 O
ATOM 24 OP2 U B 348 83.915 1.632 75.260 1.00 77.02 O
ATOM 25 O5' U B 348 82.003 1.343 76.798 1.00 73.27 O
TER

Atoms:
C2: (77.003,1.247,62.434)
OP1: (72.404,7.404,67.780)
OP2: (74.654,6.208,68.192)
C4: (78.355,0.334,64.101)
O5': (73.636,6.259,65.908)
C3': (73.411,4.133,63.511)
C1': (75.487,3.136,62.976)
O4': (75.776,4.336,63.661)
C5': (74.565,5.235,65.549)
P: (73.767,7.016,67.309)
O2: (76.590,1.283,61.255)
C4': (74.543,4.992,64.055)
C2': (74.055,2.758,63.353)
O2': (73.486,1.948,62.347)
N1: (76.486,2.140,63.384)
N3: (77.941,0.359,62.830)
N4: (79.270,-0.569,64.447)
C6: (76.917,2.099,64.679)
C5: (77.842,1.227,65.075)
O3': (73.035,4.646,62.237)
C2: (77.395,4.899,73.583)
OP1: (80.537,1.190,68.010)
OP2: (78.338,2.303,68.695)
C4: (76.233,5.557,71.658)
O5': (80.189,2.088,70.336)
C3': (80.814,1.852,73.327)
C1': (79.705,3.979,73.394)
O4': (80.754,4.076,72.446)
C5': (81.497,2.417,70.833)
P: (79.820,2.224,68.788)
O2: (77.474,4.739,74.817)
C4': (81.445,2.810,72.311)
C2': (79.531,2.524,73.822)
O2': (79.374,2.495,75.226)
N1: (78.476,4.509,72.766)
N3: (76.290,5.429,72.995)
N4: (75.134,6.084,71.117)
C6: (78.392,4.634,71.403)
C5: (77.305,5.147,70.816)
O3': (81.681,1.167,74.250)
Image (generated by PyMOL):
PyMOL image
show in jmol