Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3PDR:X21:X20
Extra
PDB:
ATOM 1 O3' C A 20 10.293 -0.458 27.259 1.00 35.80 O
ATOM 2 P C A 21 8.771 -0.487 27.802 1.00 37.14 P
ATOM 3 OP1 C A 21 8.338 -1.896 27.682 1.00 44.37 O
ATOM 4 OP2 C A 21 8.021 0.556 27.085 1.00 36.78 O
ATOM 5 O5' C A 21 8.870 -0.061 29.331 1.00 38.51 O
ATOM 6 C5' C A 21 9.435 -0.885 30.338 1.00 37.98 C
ATOM 7 C4' C A 21 9.514 -0.137 31.647 1.00 38.80 C
ATOM 8 O4' C A 21 10.451 0.973 31.533 1.00 36.13 O
ATOM 9 C3' C A 21 8.224 0.524 32.106 1.00 39.04 C
ATOM 10 O3' C A 21 7.319 -0.385 32.710 1.00 38.35 O
ATOM 11 C2' C A 21 8.739 1.617 33.038 1.00 40.85 C
ATOM 12 O2' C A 21 9.131 1.074 34.290 1.00 36.56 O
ATOM 13 C1' C A 21 10.002 2.071 32.296 1.00 36.61 C
ATOM 14 N1 C A 21 9.699 3.215 31.403 1.00 35.38 N
ATOM 15 C2 C A 21 9.597 4.490 31.966 1.00 36.68 C
ATOM 16 O2 C A 21 9.778 4.614 33.185 1.00 37.98 O
ATOM 17 N3 C A 21 9.301 5.553 31.177 1.00 33.40 N
ATOM 18 C4 C A 21 9.113 5.371 29.868 1.00 32.53 C
ATOM 19 N4 C A 21 8.821 6.438 29.128 1.00 31.70 N
ATOM 20 C5 C A 21 9.201 4.086 29.265 1.00 34.13 C
ATOM 21 C6 C A 21 9.491 3.046 30.064 1.00 34.60 C
ATOM 22 P U A 22 5.743 -0.103 32.682 1.00 40.17 P
ATOM 23 OP1 U A 22 5.233 -1.395 33.189 1.00 40.86 O
ATOM 24 OP2 U A 22 5.326 0.380 31.337 1.00 39.20 O
ATOM 25 O5' U A 22 5.492 1.073 33.731 1.00 38.67 O
TER
ATOM 1 O3' U B 19 9.982 5.196 25.693 1.00 31.51 O
ATOM 2 P C B 20 9.764 3.734 25.047 1.00 35.87 P
ATOM 3 OP1 C B 20 9.579 3.840 23.582 1.00 32.57 O
ATOM 4 OP2 C B 20 8.652 3.238 25.885 1.00 34.82 O
ATOM 5 O5' C B 20 11.118 2.977 25.417 1.00 29.16 O
ATOM 6 C5' C B 20 11.371 1.643 25.003 1.00 32.78 C
ATOM 7 C4' C B 20 12.010 0.864 26.116 1.00 33.93 C
ATOM 8 O4' C B 20 13.173 1.597 26.581 1.00 32.14 O
ATOM 9 C3' C B 20 11.158 0.666 27.360 1.00 34.33 C
ATOM 10 O3' C B 20 10.293 -0.458 27.259 1.00 35.80 O
ATOM 11 C2' C B 20 12.213 0.506 28.442 1.00 31.63 C
ATOM 12 O2' C B 20 12.724 -0.818 28.397 1.00 35.95 O
ATOM 13 C1' C B 20 13.307 1.472 27.978 1.00 31.22 C
ATOM 14 N1 C B 20 13.170 2.831 28.553 1.00 30.61 N
ATOM 15 C2 C B 20 13.344 3.001 29.923 1.00 30.05 C
ATOM 16 O2 C B 20 13.616 2.004 30.604 1.00 35.65 O
ATOM 17 N3 C B 20 13.209 4.227 30.472 1.00 31.71 N
ATOM 18 C4 C B 20 12.925 5.269 29.691 1.00 28.60 C
ATOM 19 N4 C B 20 12.804 6.459 30.267 1.00 29.19 N
ATOM 20 C5 C B 20 12.750 5.134 28.285 1.00 29.17 C
ATOM 21 C6 C B 20 12.872 3.904 27.765 1.00 30.19 C
ATOM 22 P C B 21 8.771 -0.487 27.802 1.00 37.14 P
ATOM 23 OP1 C B 21 8.338 -1.896 27.682 1.00 44.37 O
ATOM 24 OP2 C B 21 8.021 0.556 27.085 1.00 36.78 O
ATOM 25 O5' C B 21 8.870 -0.061 29.331 1.00 38.51 O
TER
ATOM 2 P C A 21 8.771 -0.487 27.802 1.00 37.14 P
ATOM 3 OP1 C A 21 8.338 -1.896 27.682 1.00 44.37 O
ATOM 4 OP2 C A 21 8.021 0.556 27.085 1.00 36.78 O
ATOM 5 O5' C A 21 8.870 -0.061 29.331 1.00 38.51 O
ATOM 6 C5' C A 21 9.435 -0.885 30.338 1.00 37.98 C
ATOM 7 C4' C A 21 9.514 -0.137 31.647 1.00 38.80 C
ATOM 8 O4' C A 21 10.451 0.973 31.533 1.00 36.13 O
ATOM 9 C3' C A 21 8.224 0.524 32.106 1.00 39.04 C
ATOM 10 O3' C A 21 7.319 -0.385 32.710 1.00 38.35 O
ATOM 11 C2' C A 21 8.739 1.617 33.038 1.00 40.85 C
ATOM 12 O2' C A 21 9.131 1.074 34.290 1.00 36.56 O
ATOM 13 C1' C A 21 10.002 2.071 32.296 1.00 36.61 C
ATOM 14 N1 C A 21 9.699 3.215 31.403 1.00 35.38 N
ATOM 15 C2 C A 21 9.597 4.490 31.966 1.00 36.68 C
ATOM 16 O2 C A 21 9.778 4.614 33.185 1.00 37.98 O
ATOM 17 N3 C A 21 9.301 5.553 31.177 1.00 33.40 N
ATOM 18 C4 C A 21 9.113 5.371 29.868 1.00 32.53 C
ATOM 19 N4 C A 21 8.821 6.438 29.128 1.00 31.70 N
ATOM 20 C5 C A 21 9.201 4.086 29.265 1.00 34.13 C
ATOM 21 C6 C A 21 9.491 3.046 30.064 1.00 34.60 C
ATOM 22 P U A 22 5.743 -0.103 32.682 1.00 40.17 P
ATOM 23 OP1 U A 22 5.233 -1.395 33.189 1.00 40.86 O
ATOM 24 OP2 U A 22 5.326 0.380 31.337 1.00 39.20 O
ATOM 25 O5' U A 22 5.492 1.073 33.731 1.00 38.67 O
TER
ATOM 1 O3' U B 19 9.982 5.196 25.693 1.00 31.51 O
ATOM 2 P C B 20 9.764 3.734 25.047 1.00 35.87 P
ATOM 3 OP1 C B 20 9.579 3.840 23.582 1.00 32.57 O
ATOM 4 OP2 C B 20 8.652 3.238 25.885 1.00 34.82 O
ATOM 5 O5' C B 20 11.118 2.977 25.417 1.00 29.16 O
ATOM 6 C5' C B 20 11.371 1.643 25.003 1.00 32.78 C
ATOM 7 C4' C B 20 12.010 0.864 26.116 1.00 33.93 C
ATOM 8 O4' C B 20 13.173 1.597 26.581 1.00 32.14 O
ATOM 9 C3' C B 20 11.158 0.666 27.360 1.00 34.33 C
ATOM 10 O3' C B 20 10.293 -0.458 27.259 1.00 35.80 O
ATOM 11 C2' C B 20 12.213 0.506 28.442 1.00 31.63 C
ATOM 12 O2' C B 20 12.724 -0.818 28.397 1.00 35.95 O
ATOM 13 C1' C B 20 13.307 1.472 27.978 1.00 31.22 C
ATOM 14 N1 C B 20 13.170 2.831 28.553 1.00 30.61 N
ATOM 15 C2 C B 20 13.344 3.001 29.923 1.00 30.05 C
ATOM 16 O2 C B 20 13.616 2.004 30.604 1.00 35.65 O
ATOM 17 N3 C B 20 13.209 4.227 30.472 1.00 31.71 N
ATOM 18 C4 C B 20 12.925 5.269 29.691 1.00 28.60 C
ATOM 19 N4 C B 20 12.804 6.459 30.267 1.00 29.19 N
ATOM 20 C5 C B 20 12.750 5.134 28.285 1.00 29.17 C
ATOM 21 C6 C B 20 12.872 3.904 27.765 1.00 30.19 C
ATOM 22 P C B 21 8.771 -0.487 27.802 1.00 37.14 P
ATOM 23 OP1 C B 21 8.338 -1.896 27.682 1.00 44.37 O
ATOM 24 OP2 C B 21 8.021 0.556 27.085 1.00 36.78 O
ATOM 25 O5' C B 21 8.870 -0.061 29.331 1.00 38.51 O
TER
Atoms:
C2: (9.597,4.490,31.966)
OP1: (8.338,-1.896,27.682)
OP2: (8.021,0.556,27.085)
C4: (9.113,5.371,29.868)
O5': (8.870,-0.061,29.331)
C3': (8.224,0.524,32.106)
C1': (10.002,2.071,32.296)
O4': (10.451,0.973,31.533)
C5': (9.435,-0.885,30.338)
P: (8.771,-0.487,27.802)
O2: (9.778,4.614,33.185)
C4': (9.514,-0.137,31.647)
C2': (8.739,1.617,33.038)
O2': (9.131,1.074,34.290)
N1: (9.699,3.215,31.403)
N3: (9.301,5.553,31.177)
N4: (8.821,6.438,29.128)
C6: (9.491,3.046,30.064)
C5: (9.201,4.086,29.265)
O3': (7.319,-0.385,32.710)
OP1: (8.338,-1.896,27.682)
OP2: (8.021,0.556,27.085)
C4: (9.113,5.371,29.868)
O5': (8.870,-0.061,29.331)
C3': (8.224,0.524,32.106)
C1': (10.002,2.071,32.296)
O4': (10.451,0.973,31.533)
C5': (9.435,-0.885,30.338)
P: (8.771,-0.487,27.802)
O2: (9.778,4.614,33.185)
C4': (9.514,-0.137,31.647)
C2': (8.739,1.617,33.038)
O2': (9.131,1.074,34.290)
N1: (9.699,3.215,31.403)
N3: (9.301,5.553,31.177)
N4: (8.821,6.438,29.128)
C6: (9.491,3.046,30.064)
C5: (9.201,4.086,29.265)
O3': (7.319,-0.385,32.710)
C2: (13.344,3.001,29.923)
OP1: (9.579,3.840,23.582)
OP2: (8.652,3.238,25.885)
C4: (12.925,5.269,29.691)
O5': (11.118,2.977,25.417)
C3': (11.158,0.666,27.360)
C1': (13.307,1.472,27.978)
O4': (13.173,1.597,26.581)
C5': (11.371,1.643,25.003)
P: (9.764,3.734,25.047)
O2: (13.616,2.004,30.604)
C4': (12.010,0.864,26.116)
C2': (12.213,0.506,28.442)
O2': (12.724,-0.818,28.397)
N1: (13.170,2.831,28.553)
N3: (13.209,4.227,30.472)
N4: (12.804,6.459,30.267)
C6: (12.872,3.904,27.765)
C5: (12.750,5.134,28.285)
O3': (10.293,-0.458,27.259)
OP1: (9.579,3.840,23.582)
OP2: (8.652,3.238,25.885)
C4: (12.925,5.269,29.691)
O5': (11.118,2.977,25.417)
C3': (11.158,0.666,27.360)
C1': (13.307,1.472,27.978)
O4': (13.173,1.597,26.581)
C5': (11.371,1.643,25.003)
P: (9.764,3.734,25.047)
O2: (13.616,2.004,30.604)
C4': (12.010,0.864,26.116)
C2': (12.213,0.506,28.442)
O2': (12.724,-0.818,28.397)
N1: (13.170,2.831,28.553)
N3: (13.209,4.227,30.472)
N4: (12.804,6.459,30.267)
C6: (12.872,3.904,27.765)
C5: (12.750,5.134,28.285)
O3': (10.293,-0.458,27.259)
Image (generated by PyMOL):