Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11441:11440
Extra
PDB:
ATOM 1 O3' C A1440 46.598 41.530 113.445 1.00 57.00 O
ATOM 2 P C A1441 47.508 42.656 112.745 1.00 54.31 P
ATOM 3 OP1 C A1441 46.596 43.800 112.446 1.00 54.57 O
ATOM 4 OP2 C A1441 48.307 42.003 111.558 1.00 53.75 O
ATOM 5 O5' C A1441 48.487 43.056 113.931 1.00 54.87 O
ATOM 6 C5' C A1441 48.003 43.751 115.051 1.00 55.46 C
ATOM 7 C4' C A1441 49.111 44.069 115.977 1.00 55.93 C
ATOM 8 O4' C A1441 49.579 42.856 116.593 1.00 55.75 O
ATOM 9 C3' C A1441 50.339 44.654 115.333 1.00 55.98 C
ATOM 10 O3' C A1441 50.222 46.033 115.138 1.00 56.40 O
ATOM 11 C2' C A1441 51.427 44.302 116.315 1.00 56.25 C
ATOM 12 O2' C A1441 51.389 45.207 117.402 1.00 56.95 O
ATOM 13 C1' C A1441 50.963 42.934 116.809 1.00 55.93 C
ATOM 14 N1 C A1441 51.597 41.804 116.086 1.00 55.34 N
ATOM 15 C2 C A1441 52.856 41.311 116.443 1.00 55.38 C
ATOM 16 O2 C A1441 53.468 41.865 117.327 1.00 55.91 O
ATOM 17 N3 C A1441 53.405 40.240 115.823 1.00 54.86 N
ATOM 18 C4 C A1441 52.735 39.636 114.852 1.00 54.29 C
ATOM 19 N4 C A1441 53.318 38.592 114.273 1.00 53.81 N
ATOM 20 C5 C A1441 51.438 40.096 114.461 1.00 54.22 C
ATOM 21 C6 C A1441 50.906 41.154 115.097 1.00 54.75 C
ATOM 22 P A A1442 51.011 46.726 113.945 1.00 60.36 P
ATOM 23 OP1 A A1442 50.470 48.113 113.810 1.00 60.79 O
ATOM 24 OP2 A A1442 50.907 45.809 112.794 1.00 59.64 O
ATOM 25 O5' A A1442 52.525 46.749 114.483 1.00 60.63 O
TER
ATOM 1 O3' U B1439 48.676 37.307 109.803 1.00 52.30 O
ATOM 2 P C B1440 48.749 38.587 110.765 1.00 55.29 P
ATOM 3 OP1 C B1440 48.142 39.759 110.013 1.00 55.41 O
ATOM 4 OP2 C B1440 50.152 38.705 111.230 1.00 55.54 O
ATOM 5 O5' C B1440 47.827 38.159 111.990 1.00 55.50 O
ATOM 6 C5' C B1440 46.507 38.636 112.116 1.00 55.64 C
ATOM 7 C4' C B1440 46.268 39.167 113.488 1.00 56.24 C
ATOM 8 O4' C B1440 46.541 38.139 114.469 1.00 56.24 O
ATOM 9 C3' C B1440 47.142 40.320 113.893 1.00 56.77 C
ATOM 10 O3' C B1440 46.598 41.530 113.445 1.00 57.00 O
ATOM 11 C2' C B1440 47.170 40.198 115.408 1.00 57.23 C
ATOM 12 O2' C B1440 45.971 40.697 115.952 1.00 57.53 O
ATOM 13 C1' C B1440 47.146 38.694 115.600 1.00 56.82 C
ATOM 14 N1 C B1440 48.476 38.083 115.740 1.00 56.73 N
ATOM 15 C2 C B1440 49.415 38.350 116.733 1.00 57.20 C
ATOM 16 O2 C B1440 49.233 39.235 117.577 1.00 57.76 O
ATOM 17 N3 C B1440 50.563 37.629 116.755 1.00 57.05 N
ATOM 18 C4 C B1440 50.775 36.668 115.866 1.00 56.47 C
ATOM 19 N4 C B1440 51.907 36.009 115.953 1.00 56.37 N
ATOM 20 C5 C B1440 49.847 36.342 114.854 1.00 55.98 C
ATOM 21 C6 C B1440 48.733 37.076 114.862 1.00 56.14 C
ATOM 22 P C B1441 47.508 42.656 112.745 1.00 54.31 P
ATOM 23 OP1 C B1441 46.596 43.800 112.446 1.00 54.57 O
ATOM 24 OP2 C B1441 48.307 42.003 111.558 1.00 53.75 O
ATOM 25 O5' C B1441 48.487 43.056 113.931 1.00 54.87 O
TER
ATOM 2 P C A1441 47.508 42.656 112.745 1.00 54.31 P
ATOM 3 OP1 C A1441 46.596 43.800 112.446 1.00 54.57 O
ATOM 4 OP2 C A1441 48.307 42.003 111.558 1.00 53.75 O
ATOM 5 O5' C A1441 48.487 43.056 113.931 1.00 54.87 O
ATOM 6 C5' C A1441 48.003 43.751 115.051 1.00 55.46 C
ATOM 7 C4' C A1441 49.111 44.069 115.977 1.00 55.93 C
ATOM 8 O4' C A1441 49.579 42.856 116.593 1.00 55.75 O
ATOM 9 C3' C A1441 50.339 44.654 115.333 1.00 55.98 C
ATOM 10 O3' C A1441 50.222 46.033 115.138 1.00 56.40 O
ATOM 11 C2' C A1441 51.427 44.302 116.315 1.00 56.25 C
ATOM 12 O2' C A1441 51.389 45.207 117.402 1.00 56.95 O
ATOM 13 C1' C A1441 50.963 42.934 116.809 1.00 55.93 C
ATOM 14 N1 C A1441 51.597 41.804 116.086 1.00 55.34 N
ATOM 15 C2 C A1441 52.856 41.311 116.443 1.00 55.38 C
ATOM 16 O2 C A1441 53.468 41.865 117.327 1.00 55.91 O
ATOM 17 N3 C A1441 53.405 40.240 115.823 1.00 54.86 N
ATOM 18 C4 C A1441 52.735 39.636 114.852 1.00 54.29 C
ATOM 19 N4 C A1441 53.318 38.592 114.273 1.00 53.81 N
ATOM 20 C5 C A1441 51.438 40.096 114.461 1.00 54.22 C
ATOM 21 C6 C A1441 50.906 41.154 115.097 1.00 54.75 C
ATOM 22 P A A1442 51.011 46.726 113.945 1.00 60.36 P
ATOM 23 OP1 A A1442 50.470 48.113 113.810 1.00 60.79 O
ATOM 24 OP2 A A1442 50.907 45.809 112.794 1.00 59.64 O
ATOM 25 O5' A A1442 52.525 46.749 114.483 1.00 60.63 O
TER
ATOM 1 O3' U B1439 48.676 37.307 109.803 1.00 52.30 O
ATOM 2 P C B1440 48.749 38.587 110.765 1.00 55.29 P
ATOM 3 OP1 C B1440 48.142 39.759 110.013 1.00 55.41 O
ATOM 4 OP2 C B1440 50.152 38.705 111.230 1.00 55.54 O
ATOM 5 O5' C B1440 47.827 38.159 111.990 1.00 55.50 O
ATOM 6 C5' C B1440 46.507 38.636 112.116 1.00 55.64 C
ATOM 7 C4' C B1440 46.268 39.167 113.488 1.00 56.24 C
ATOM 8 O4' C B1440 46.541 38.139 114.469 1.00 56.24 O
ATOM 9 C3' C B1440 47.142 40.320 113.893 1.00 56.77 C
ATOM 10 O3' C B1440 46.598 41.530 113.445 1.00 57.00 O
ATOM 11 C2' C B1440 47.170 40.198 115.408 1.00 57.23 C
ATOM 12 O2' C B1440 45.971 40.697 115.952 1.00 57.53 O
ATOM 13 C1' C B1440 47.146 38.694 115.600 1.00 56.82 C
ATOM 14 N1 C B1440 48.476 38.083 115.740 1.00 56.73 N
ATOM 15 C2 C B1440 49.415 38.350 116.733 1.00 57.20 C
ATOM 16 O2 C B1440 49.233 39.235 117.577 1.00 57.76 O
ATOM 17 N3 C B1440 50.563 37.629 116.755 1.00 57.05 N
ATOM 18 C4 C B1440 50.775 36.668 115.866 1.00 56.47 C
ATOM 19 N4 C B1440 51.907 36.009 115.953 1.00 56.37 N
ATOM 20 C5 C B1440 49.847 36.342 114.854 1.00 55.98 C
ATOM 21 C6 C B1440 48.733 37.076 114.862 1.00 56.14 C
ATOM 22 P C B1441 47.508 42.656 112.745 1.00 54.31 P
ATOM 23 OP1 C B1441 46.596 43.800 112.446 1.00 54.57 O
ATOM 24 OP2 C B1441 48.307 42.003 111.558 1.00 53.75 O
ATOM 25 O5' C B1441 48.487 43.056 113.931 1.00 54.87 O
TER
Atoms:
C2: (52.856,41.311,116.443)
OP1: (46.596,43.800,112.446)
OP2: (48.307,42.003,111.558)
C4: (52.735,39.636,114.852)
O5': (48.487,43.056,113.931)
C3': (50.339,44.654,115.333)
C1': (50.963,42.934,116.809)
O4': (49.579,42.856,116.593)
C5': (48.003,43.751,115.051)
P: (47.508,42.656,112.745)
O2: (53.468,41.865,117.327)
C4': (49.111,44.069,115.977)
C2': (51.427,44.302,116.315)
O2': (51.389,45.207,117.402)
N1: (51.597,41.804,116.086)
N3: (53.405,40.240,115.823)
N4: (53.318,38.592,114.273)
C6: (50.906,41.154,115.097)
C5: (51.438,40.096,114.461)
O3': (50.222,46.033,115.138)
OP1: (46.596,43.800,112.446)
OP2: (48.307,42.003,111.558)
C4: (52.735,39.636,114.852)
O5': (48.487,43.056,113.931)
C3': (50.339,44.654,115.333)
C1': (50.963,42.934,116.809)
O4': (49.579,42.856,116.593)
C5': (48.003,43.751,115.051)
P: (47.508,42.656,112.745)
O2: (53.468,41.865,117.327)
C4': (49.111,44.069,115.977)
C2': (51.427,44.302,116.315)
O2': (51.389,45.207,117.402)
N1: (51.597,41.804,116.086)
N3: (53.405,40.240,115.823)
N4: (53.318,38.592,114.273)
C6: (50.906,41.154,115.097)
C5: (51.438,40.096,114.461)
O3': (50.222,46.033,115.138)
C2: (49.415,38.350,116.733)
OP1: (48.142,39.759,110.013)
OP2: (50.152,38.705,111.230)
C4: (50.775,36.668,115.866)
O5': (47.827,38.159,111.990)
C3': (47.142,40.320,113.893)
C1': (47.146,38.694,115.600)
O4': (46.541,38.139,114.469)
C5': (46.507,38.636,112.116)
P: (48.749,38.587,110.765)
O2: (49.233,39.235,117.577)
C4': (46.268,39.167,113.488)
C2': (47.170,40.198,115.408)
O2': (45.971,40.697,115.952)
N1: (48.476,38.083,115.740)
N3: (50.563,37.629,116.755)
N4: (51.907,36.009,115.953)
C6: (48.733,37.076,114.862)
C5: (49.847,36.342,114.854)
O3': (46.598,41.530,113.445)
OP1: (48.142,39.759,110.013)
OP2: (50.152,38.705,111.230)
C4: (50.775,36.668,115.866)
O5': (47.827,38.159,111.990)
C3': (47.142,40.320,113.893)
C1': (47.146,38.694,115.600)
O4': (46.541,38.139,114.469)
C5': (46.507,38.636,112.116)
P: (48.749,38.587,110.765)
O2: (49.233,39.235,117.577)
C4': (46.268,39.167,113.488)
C2': (47.170,40.198,115.408)
O2': (45.971,40.697,115.952)
N1: (48.476,38.083,115.740)
N3: (50.563,37.629,116.755)
N4: (51.907,36.009,115.953)
C6: (48.733,37.076,114.862)
C5: (49.847,36.342,114.854)
O3': (46.598,41.530,113.445)
Image (generated by PyMOL):