Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02187:02186
Extra
PDB:
ATOM 1 O3' A A2186 95.791 43.009 105.424 1.00108.81 O
ATOM 2 P C A2187 94.950 41.818 104.732 1.00106.45 P
ATOM 3 OP1 C A2187 94.674 42.258 103.336 1.00106.13 O
ATOM 4 OP2 C A2187 93.814 41.458 105.623 1.00106.65 O
ATOM 5 O5' C A2187 95.952 40.585 104.662 1.00103.03 O
ATOM 6 C5' C A2187 96.331 40.000 103.406 1.00 98.56 C
ATOM 7 C4' C A2187 96.785 38.582 103.624 1.00 95.72 C
ATOM 8 O4' C A2187 97.742 38.591 104.717 1.00 95.09 O
ATOM 9 C3' C A2187 95.705 37.615 104.086 1.00 94.60 C
ATOM 10 O3' C A2187 94.967 37.067 102.995 1.00 93.13 O
ATOM 11 C2' C A2187 96.518 36.573 104.837 1.00 94.56 C
ATOM 12 O2' C A2187 97.217 35.694 103.978 1.00 94.45 O
ATOM 13 C1' C A2187 97.525 37.468 105.557 1.00 94.79 C
ATOM 14 N1 C A2187 97.007 37.952 106.853 1.00 94.94 N
ATOM 15 C2 C A2187 97.070 37.102 107.972 1.00 94.97 C
ATOM 16 O2 C A2187 97.588 35.975 107.851 1.00 94.34 O
ATOM 17 N3 C A2187 96.565 37.532 109.154 1.00 95.29 N
ATOM 18 C4 C A2187 96.021 38.750 109.245 1.00 95.39 C
ATOM 19 N4 C A2187 95.518 39.127 110.426 1.00 94.86 N
ATOM 20 C5 C A2187 95.962 39.636 108.131 1.00 95.18 C
ATOM 21 C6 C A2187 96.461 39.201 106.969 1.00 94.63 C
ATOM 22 P C A2188 93.475 36.505 103.234 1.00 90.90 P
ATOM 23 OP1 C A2188 92.926 36.085 101.914 1.00 89.75 O
ATOM 24 OP2 C A2188 92.729 37.495 104.061 1.00 90.45 O
ATOM 25 O5' C A2188 93.698 35.186 104.095 1.00 88.66 O
TER
ATOM 1 P A B2186 95.866 43.034 110.042 1.00117.66 P
ATOM 2 OP1 A B2186 94.953 42.371 109.082 1.00118.72 O
ATOM 3 OP2 A B2186 96.498 42.231 111.120 1.00117.94 O
ATOM 4 O5' A B2186 97.011 43.747 109.199 1.00116.11 O
ATOM 5 C5' A B2186 96.695 44.577 108.070 1.00113.53 C
ATOM 6 C4' A B2186 97.395 44.053 106.845 1.00112.63 C
ATOM 7 O4' A B2186 98.776 43.794 107.189 1.00113.63 O
ATOM 8 C3' A B2186 96.879 42.724 106.314 1.00111.91 C
ATOM 9 O3' A B2186 95.791 43.009 105.424 1.00108.81 O
ATOM 10 C2' A B2186 98.099 42.154 105.588 1.00113.43 C
ATOM 11 O2' A B2186 98.240 42.636 104.269 1.00114.86 O
ATOM 12 C1' A B2186 99.256 42.704 106.430 1.00115.02 C
ATOM 13 N9 A B2186 99.946 41.779 107.331 1.00117.46 N
ATOM 14 C8 A B2186 99.550 40.538 107.769 1.00118.89 C
ATOM 15 N7 A B2186 100.411 39.962 108.577 1.00120.17 N
ATOM 16 C5 A B2186 101.443 40.885 108.680 1.00119.80 C
ATOM 17 C6 A B2186 102.659 40.875 109.395 1.00120.18 C
ATOM 18 N6 A B2186 103.059 39.859 110.169 1.00119.35 N
ATOM 19 N1 A B2186 103.458 41.959 109.285 1.00120.36 N
ATOM 20 C2 A B2186 103.058 42.977 108.506 1.00119.47 C
ATOM 21 N3 A B2186 101.945 43.103 107.786 1.00118.51 N
ATOM 22 C4 A B2186 101.170 42.011 107.918 1.00118.74 C
ATOM 23 P C B2187 94.950 41.818 104.732 1.00106.45 P
ATOM 24 OP1 C B2187 94.674 42.258 103.336 1.00106.13 O
ATOM 25 OP2 C B2187 93.814 41.458 105.623 1.00106.65 O
ATOM 26 O5' C B2187 95.952 40.585 104.662 1.00103.03 O
TER
ATOM 2 P C A2187 94.950 41.818 104.732 1.00106.45 P
ATOM 3 OP1 C A2187 94.674 42.258 103.336 1.00106.13 O
ATOM 4 OP2 C A2187 93.814 41.458 105.623 1.00106.65 O
ATOM 5 O5' C A2187 95.952 40.585 104.662 1.00103.03 O
ATOM 6 C5' C A2187 96.331 40.000 103.406 1.00 98.56 C
ATOM 7 C4' C A2187 96.785 38.582 103.624 1.00 95.72 C
ATOM 8 O4' C A2187 97.742 38.591 104.717 1.00 95.09 O
ATOM 9 C3' C A2187 95.705 37.615 104.086 1.00 94.60 C
ATOM 10 O3' C A2187 94.967 37.067 102.995 1.00 93.13 O
ATOM 11 C2' C A2187 96.518 36.573 104.837 1.00 94.56 C
ATOM 12 O2' C A2187 97.217 35.694 103.978 1.00 94.45 O
ATOM 13 C1' C A2187 97.525 37.468 105.557 1.00 94.79 C
ATOM 14 N1 C A2187 97.007 37.952 106.853 1.00 94.94 N
ATOM 15 C2 C A2187 97.070 37.102 107.972 1.00 94.97 C
ATOM 16 O2 C A2187 97.588 35.975 107.851 1.00 94.34 O
ATOM 17 N3 C A2187 96.565 37.532 109.154 1.00 95.29 N
ATOM 18 C4 C A2187 96.021 38.750 109.245 1.00 95.39 C
ATOM 19 N4 C A2187 95.518 39.127 110.426 1.00 94.86 N
ATOM 20 C5 C A2187 95.962 39.636 108.131 1.00 95.18 C
ATOM 21 C6 C A2187 96.461 39.201 106.969 1.00 94.63 C
ATOM 22 P C A2188 93.475 36.505 103.234 1.00 90.90 P
ATOM 23 OP1 C A2188 92.926 36.085 101.914 1.00 89.75 O
ATOM 24 OP2 C A2188 92.729 37.495 104.061 1.00 90.45 O
ATOM 25 O5' C A2188 93.698 35.186 104.095 1.00 88.66 O
TER
ATOM 1 P A B2186 95.866 43.034 110.042 1.00117.66 P
ATOM 2 OP1 A B2186 94.953 42.371 109.082 1.00118.72 O
ATOM 3 OP2 A B2186 96.498 42.231 111.120 1.00117.94 O
ATOM 4 O5' A B2186 97.011 43.747 109.199 1.00116.11 O
ATOM 5 C5' A B2186 96.695 44.577 108.070 1.00113.53 C
ATOM 6 C4' A B2186 97.395 44.053 106.845 1.00112.63 C
ATOM 7 O4' A B2186 98.776 43.794 107.189 1.00113.63 O
ATOM 8 C3' A B2186 96.879 42.724 106.314 1.00111.91 C
ATOM 9 O3' A B2186 95.791 43.009 105.424 1.00108.81 O
ATOM 10 C2' A B2186 98.099 42.154 105.588 1.00113.43 C
ATOM 11 O2' A B2186 98.240 42.636 104.269 1.00114.86 O
ATOM 12 C1' A B2186 99.256 42.704 106.430 1.00115.02 C
ATOM 13 N9 A B2186 99.946 41.779 107.331 1.00117.46 N
ATOM 14 C8 A B2186 99.550 40.538 107.769 1.00118.89 C
ATOM 15 N7 A B2186 100.411 39.962 108.577 1.00120.17 N
ATOM 16 C5 A B2186 101.443 40.885 108.680 1.00119.80 C
ATOM 17 C6 A B2186 102.659 40.875 109.395 1.00120.18 C
ATOM 18 N6 A B2186 103.059 39.859 110.169 1.00119.35 N
ATOM 19 N1 A B2186 103.458 41.959 109.285 1.00120.36 N
ATOM 20 C2 A B2186 103.058 42.977 108.506 1.00119.47 C
ATOM 21 N3 A B2186 101.945 43.103 107.786 1.00118.51 N
ATOM 22 C4 A B2186 101.170 42.011 107.918 1.00118.74 C
ATOM 23 P C B2187 94.950 41.818 104.732 1.00106.45 P
ATOM 24 OP1 C B2187 94.674 42.258 103.336 1.00106.13 O
ATOM 25 OP2 C B2187 93.814 41.458 105.623 1.00106.65 O
ATOM 26 O5' C B2187 95.952 40.585 104.662 1.00103.03 O
TER
Atoms:
C2: (97.070,37.102,107.972)
OP1: (94.674,42.258,103.336)
OP2: (93.814,41.458,105.623)
C4: (96.021,38.750,109.245)
O5': (95.952,40.585,104.662)
C3': (95.705,37.615,104.086)
C1': (97.525,37.468,105.557)
O4': (97.742,38.591,104.717)
C5': (96.331,40.000,103.406)
P: (94.950,41.818,104.732)
O2: (97.588,35.975,107.851)
C4': (96.785,38.582,103.624)
C2': (96.518,36.573,104.837)
O2': (97.217,35.694,103.978)
N1: (97.007,37.952,106.853)
N3: (96.565,37.532,109.154)
N4: (95.518,39.127,110.426)
C6: (96.461,39.201,106.969)
C5: (95.962,39.636,108.131)
O3': (94.967,37.067,102.995)
OP1: (94.674,42.258,103.336)
OP2: (93.814,41.458,105.623)
C4: (96.021,38.750,109.245)
O5': (95.952,40.585,104.662)
C3': (95.705,37.615,104.086)
C1': (97.525,37.468,105.557)
O4': (97.742,38.591,104.717)
C5': (96.331,40.000,103.406)
P: (94.950,41.818,104.732)
O2: (97.588,35.975,107.851)
C4': (96.785,38.582,103.624)
C2': (96.518,36.573,104.837)
O2': (97.217,35.694,103.978)
N1: (97.007,37.952,106.853)
N3: (96.565,37.532,109.154)
N4: (95.518,39.127,110.426)
C6: (96.461,39.201,106.969)
C5: (95.962,39.636,108.131)
O3': (94.967,37.067,102.995)
OP1: (94.953,42.371,109.082)
OP2: (96.498,42.231,111.120)
C3': (96.879,42.724,106.314)
C1': (99.256,42.704,106.430)
C5': (96.695,44.577,108.070)
O4': (98.776,43.794,107.189)
C8: (99.550,40.538,107.769)
O2': (98.240,42.636,104.269)
C6: (102.659,40.875,109.395)
C5: (101.443,40.885,108.680)
C4: (101.170,42.011,107.918)
P: (95.866,43.034,110.042)
C4': (97.395,44.053,106.845)
C2': (98.099,42.154,105.588)
C2: (103.058,42.977,108.506)
N1: (103.458,41.959,109.285)
N3: (101.945,43.103,107.786)
N6: (103.059,39.859,110.169)
N7: (100.411,39.962,108.577)
N9: (99.946,41.779,107.331)
O5': (97.011,43.747,109.199)
O3': (95.791,43.009,105.424)
OP2: (96.498,42.231,111.120)
C3': (96.879,42.724,106.314)
C1': (99.256,42.704,106.430)
C5': (96.695,44.577,108.070)
O4': (98.776,43.794,107.189)
C8: (99.550,40.538,107.769)
O2': (98.240,42.636,104.269)
C6: (102.659,40.875,109.395)
C5: (101.443,40.885,108.680)
C4: (101.170,42.011,107.918)
P: (95.866,43.034,110.042)
C4': (97.395,44.053,106.845)
C2': (98.099,42.154,105.588)
C2: (103.058,42.977,108.506)
N1: (103.458,41.959,109.285)
N3: (101.945,43.103,107.786)
N6: (103.059,39.859,110.169)
N7: (100.411,39.962,108.577)
N9: (99.946,41.779,107.331)
O5': (97.011,43.747,109.199)
O3': (95.791,43.009,105.424)
Image (generated by PyMOL):