Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11780:11779
Extra
PDB:
ATOM 1 O3' A A1779 43.063 38.517 120.117 1.00 55.89 O
ATOM 2 P C A1780 41.511 38.651 119.838 1.00 48.50 P
ATOM 3 OP1 C A1780 41.030 39.778 120.589 1.00 49.13 O
ATOM 4 OP2 C A1780 40.945 37.368 120.128 1.00 48.20 O
ATOM 5 O5' C A1780 41.377 38.906 118.262 1.00 48.02 O
ATOM 6 C5' C A1780 42.434 39.390 117.482 1.00 47.93 C
ATOM 7 C4' C A1780 42.692 38.549 116.247 1.00 47.24 C
ATOM 8 O4' C A1780 43.332 37.318 116.601 1.00 47.00 O
ATOM 9 C3' C A1780 41.518 38.099 115.404 1.00 46.80 C
ATOM 10 O3' C A1780 40.973 39.150 114.637 1.00 46.87 O
ATOM 11 C2' C A1780 42.194 37.032 114.550 1.00 46.20 C
ATOM 12 O2' C A1780 42.970 37.634 113.511 1.00 46.06 O
ATOM 13 C1' C A1780 43.161 36.397 115.560 1.00 46.36 C
ATOM 14 N1 C A1780 42.623 35.174 116.133 1.00 46.18 N
ATOM 15 C2 C A1780 42.467 34.023 115.333 1.00 45.58 C
ATOM 16 O2 C A1780 42.823 34.032 114.135 1.00 45.20 O
ATOM 17 N3 C A1780 41.914 32.932 115.909 1.00 45.45 N
ATOM 18 C4 C A1780 41.582 32.983 117.201 1.00 45.89 C
ATOM 19 N4 C A1780 41.088 31.881 117.749 1.00 45.77 N
ATOM 20 C5 C A1780 41.756 34.129 118.023 1.00 46.50 C
ATOM 21 C6 C A1780 42.274 35.209 117.453 1.00 46.63 C
ATOM 22 P U A1781 39.540 39.028 113.926 1.00 50.42 P
ATOM 23 OP1 U A1781 39.308 40.279 113.202 1.00 50.59 O
ATOM 24 OP2 U A1781 38.612 38.659 114.904 1.00 50.61 O
ATOM 25 O5' U A1781 39.723 37.841 112.894 1.00 49.72 O
TER
ATOM 1 O3' U B1778 40.977 34.578 123.856 1.00 50.94 O
ATOM 2 P A B1779 40.764 34.742 122.305 1.00 55.50 P
ATOM 3 OP1 A B1779 39.360 34.985 122.090 1.00 55.47 O
ATOM 4 OP2 A B1779 41.349 33.569 121.670 1.00 54.93 O
ATOM 5 O5' A B1779 41.619 36.029 121.939 1.00 55.76 O
ATOM 6 C5' A B1779 42.777 36.400 122.666 1.00 56.17 C
ATOM 7 C4' A B1779 43.909 36.910 121.783 1.00 56.03 C
ATOM 8 O4' A B1779 44.926 35.898 121.700 1.00 55.73 O
ATOM 9 C3' A B1779 43.605 37.235 120.319 1.00 55.58 C
ATOM 10 O3' A B1779 43.063 38.517 120.117 1.00 55.89 O
ATOM 11 C2' A B1779 44.953 37.095 119.674 1.00 55.35 C
ATOM 12 O2' A B1779 45.735 38.223 119.968 1.00 55.83 O
ATOM 13 C1' A B1779 45.521 35.914 120.429 1.00 55.28 C
ATOM 14 N9 A B1779 45.190 34.664 119.768 1.00 54.66 N
ATOM 15 C8 A B1779 44.418 33.675 120.253 1.00 54.53 C
ATOM 16 N7 A B1779 44.265 32.676 119.422 1.00 53.94 N
ATOM 17 C5 A B1779 44.996 33.063 118.321 1.00 53.69 C
ATOM 18 C6 A B1779 45.252 32.432 117.096 1.00 53.10 C
ATOM 19 N6 A B1779 44.788 31.235 116.740 1.00 52.63 N
ATOM 20 N1 A B1779 46.035 33.103 116.247 1.00 53.02 N
ATOM 21 C2 A B1779 46.519 34.309 116.565 1.00 53.49 C
ATOM 22 N3 A B1779 46.354 34.998 117.693 1.00 54.07 N
ATOM 23 C4 A B1779 45.571 34.300 118.531 1.00 54.13 C
ATOM 24 P C B1780 41.511 38.651 119.838 1.00 48.50 P
ATOM 25 OP1 C B1780 41.030 39.778 120.589 1.00 49.13 O
ATOM 26 OP2 C B1780 40.945 37.368 120.128 1.00 48.20 O
ATOM 27 O5' C B1780 41.377 38.906 118.262 1.00 48.02 O
TER
ATOM 2 P C A1780 41.511 38.651 119.838 1.00 48.50 P
ATOM 3 OP1 C A1780 41.030 39.778 120.589 1.00 49.13 O
ATOM 4 OP2 C A1780 40.945 37.368 120.128 1.00 48.20 O
ATOM 5 O5' C A1780 41.377 38.906 118.262 1.00 48.02 O
ATOM 6 C5' C A1780 42.434 39.390 117.482 1.00 47.93 C
ATOM 7 C4' C A1780 42.692 38.549 116.247 1.00 47.24 C
ATOM 8 O4' C A1780 43.332 37.318 116.601 1.00 47.00 O
ATOM 9 C3' C A1780 41.518 38.099 115.404 1.00 46.80 C
ATOM 10 O3' C A1780 40.973 39.150 114.637 1.00 46.87 O
ATOM 11 C2' C A1780 42.194 37.032 114.550 1.00 46.20 C
ATOM 12 O2' C A1780 42.970 37.634 113.511 1.00 46.06 O
ATOM 13 C1' C A1780 43.161 36.397 115.560 1.00 46.36 C
ATOM 14 N1 C A1780 42.623 35.174 116.133 1.00 46.18 N
ATOM 15 C2 C A1780 42.467 34.023 115.333 1.00 45.58 C
ATOM 16 O2 C A1780 42.823 34.032 114.135 1.00 45.20 O
ATOM 17 N3 C A1780 41.914 32.932 115.909 1.00 45.45 N
ATOM 18 C4 C A1780 41.582 32.983 117.201 1.00 45.89 C
ATOM 19 N4 C A1780 41.088 31.881 117.749 1.00 45.77 N
ATOM 20 C5 C A1780 41.756 34.129 118.023 1.00 46.50 C
ATOM 21 C6 C A1780 42.274 35.209 117.453 1.00 46.63 C
ATOM 22 P U A1781 39.540 39.028 113.926 1.00 50.42 P
ATOM 23 OP1 U A1781 39.308 40.279 113.202 1.00 50.59 O
ATOM 24 OP2 U A1781 38.612 38.659 114.904 1.00 50.61 O
ATOM 25 O5' U A1781 39.723 37.841 112.894 1.00 49.72 O
TER
ATOM 1 O3' U B1778 40.977 34.578 123.856 1.00 50.94 O
ATOM 2 P A B1779 40.764 34.742 122.305 1.00 55.50 P
ATOM 3 OP1 A B1779 39.360 34.985 122.090 1.00 55.47 O
ATOM 4 OP2 A B1779 41.349 33.569 121.670 1.00 54.93 O
ATOM 5 O5' A B1779 41.619 36.029 121.939 1.00 55.76 O
ATOM 6 C5' A B1779 42.777 36.400 122.666 1.00 56.17 C
ATOM 7 C4' A B1779 43.909 36.910 121.783 1.00 56.03 C
ATOM 8 O4' A B1779 44.926 35.898 121.700 1.00 55.73 O
ATOM 9 C3' A B1779 43.605 37.235 120.319 1.00 55.58 C
ATOM 10 O3' A B1779 43.063 38.517 120.117 1.00 55.89 O
ATOM 11 C2' A B1779 44.953 37.095 119.674 1.00 55.35 C
ATOM 12 O2' A B1779 45.735 38.223 119.968 1.00 55.83 O
ATOM 13 C1' A B1779 45.521 35.914 120.429 1.00 55.28 C
ATOM 14 N9 A B1779 45.190 34.664 119.768 1.00 54.66 N
ATOM 15 C8 A B1779 44.418 33.675 120.253 1.00 54.53 C
ATOM 16 N7 A B1779 44.265 32.676 119.422 1.00 53.94 N
ATOM 17 C5 A B1779 44.996 33.063 118.321 1.00 53.69 C
ATOM 18 C6 A B1779 45.252 32.432 117.096 1.00 53.10 C
ATOM 19 N6 A B1779 44.788 31.235 116.740 1.00 52.63 N
ATOM 20 N1 A B1779 46.035 33.103 116.247 1.00 53.02 N
ATOM 21 C2 A B1779 46.519 34.309 116.565 1.00 53.49 C
ATOM 22 N3 A B1779 46.354 34.998 117.693 1.00 54.07 N
ATOM 23 C4 A B1779 45.571 34.300 118.531 1.00 54.13 C
ATOM 24 P C B1780 41.511 38.651 119.838 1.00 48.50 P
ATOM 25 OP1 C B1780 41.030 39.778 120.589 1.00 49.13 O
ATOM 26 OP2 C B1780 40.945 37.368 120.128 1.00 48.20 O
ATOM 27 O5' C B1780 41.377 38.906 118.262 1.00 48.02 O
TER
Atoms:
C2: (42.467,34.023,115.333)
OP1: (41.030,39.778,120.589)
OP2: (40.945,37.368,120.128)
C4: (41.582,32.983,117.201)
O5': (41.377,38.906,118.262)
C3': (41.518,38.099,115.404)
C1': (43.161,36.397,115.560)
O4': (43.332,37.318,116.601)
C5': (42.434,39.390,117.482)
P: (41.511,38.651,119.838)
O2: (42.823,34.032,114.135)
C4': (42.692,38.549,116.247)
C2': (42.194,37.032,114.550)
O2': (42.970,37.634,113.511)
N1: (42.623,35.174,116.133)
N3: (41.914,32.932,115.909)
N4: (41.088,31.881,117.749)
C6: (42.274,35.209,117.453)
C5: (41.756,34.129,118.023)
O3': (40.973,39.150,114.637)
OP1: (41.030,39.778,120.589)
OP2: (40.945,37.368,120.128)
C4: (41.582,32.983,117.201)
O5': (41.377,38.906,118.262)
C3': (41.518,38.099,115.404)
C1': (43.161,36.397,115.560)
O4': (43.332,37.318,116.601)
C5': (42.434,39.390,117.482)
P: (41.511,38.651,119.838)
O2: (42.823,34.032,114.135)
C4': (42.692,38.549,116.247)
C2': (42.194,37.032,114.550)
O2': (42.970,37.634,113.511)
N1: (42.623,35.174,116.133)
N3: (41.914,32.932,115.909)
N4: (41.088,31.881,117.749)
C6: (42.274,35.209,117.453)
C5: (41.756,34.129,118.023)
O3': (40.973,39.150,114.637)
OP1: (39.360,34.985,122.090)
OP2: (41.349,33.569,121.670)
C3': (43.605,37.235,120.319)
C1': (45.521,35.914,120.429)
C5': (42.777,36.400,122.666)
O4': (44.926,35.898,121.700)
C8: (44.418,33.675,120.253)
O2': (45.735,38.223,119.968)
C6: (45.252,32.432,117.096)
C5: (44.996,33.063,118.321)
C4: (45.571,34.300,118.531)
P: (40.764,34.742,122.305)
C4': (43.909,36.910,121.783)
C2': (44.953,37.095,119.674)
C2: (46.519,34.309,116.565)
N1: (46.035,33.103,116.247)
N3: (46.354,34.998,117.693)
N6: (44.788,31.235,116.740)
N7: (44.265,32.676,119.422)
N9: (45.190,34.664,119.768)
O5': (41.619,36.029,121.939)
O3': (43.063,38.517,120.117)
OP2: (41.349,33.569,121.670)
C3': (43.605,37.235,120.319)
C1': (45.521,35.914,120.429)
C5': (42.777,36.400,122.666)
O4': (44.926,35.898,121.700)
C8: (44.418,33.675,120.253)
O2': (45.735,38.223,119.968)
C6: (45.252,32.432,117.096)
C5: (44.996,33.063,118.321)
C4: (45.571,34.300,118.531)
P: (40.764,34.742,122.305)
C4': (43.909,36.910,121.783)
C2': (44.953,37.095,119.674)
C2: (46.519,34.309,116.565)
N1: (46.035,33.103,116.247)
N3: (46.354,34.998,117.693)
N6: (44.788,31.235,116.740)
N7: (44.265,32.676,119.422)
N9: (45.190,34.664,119.768)
O5': (41.619,36.029,121.939)
O3': (43.063,38.517,120.117)
Image (generated by PyMOL):