Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:01167:01166
Extra
PDB:
ATOM 1 O3' A A1166 54.665 79.203 173.192 1.00 98.05 O
ATOM 2 P C A1167 53.084 78.931 173.263 1.00 95.60 P
ATOM 3 OP1 C A1167 52.669 78.315 171.976 1.00 96.26 O
ATOM 4 OP2 C A1167 52.387 80.151 173.747 1.00 94.97 O
ATOM 5 O5' C A1167 52.971 77.826 174.393 1.00 94.52 O
ATOM 6 C5' C A1167 52.082 77.999 175.486 1.00 92.51 C
ATOM 7 C4' C A1167 52.750 77.582 176.764 1.00 90.92 C
ATOM 8 O4' C A1167 53.913 78.413 177.024 1.00 91.11 O
ATOM 9 C3' C A1167 51.863 77.789 177.968 1.00 89.57 C
ATOM 10 O3' C A1167 50.961 76.709 178.085 1.00 85.98 O
ATOM 11 C2' C A1167 52.878 77.915 179.087 1.00 91.04 C
ATOM 12 O2' C A1167 53.436 76.667 179.441 1.00 91.79 O
ATOM 13 C1' C A1167 53.945 78.773 178.400 1.00 92.34 C
ATOM 14 N1 C A1167 53.664 80.227 178.502 1.00 94.28 N
ATOM 15 C2 C A1167 53.558 80.827 179.779 1.00 94.98 C
ATOM 16 O2 C A1167 53.729 80.131 180.795 1.00 95.06 O
ATOM 17 N3 C A1167 53.273 82.150 179.865 1.00 95.41 N
ATOM 18 C4 C A1167 53.101 82.872 178.753 1.00 95.13 C
ATOM 19 N4 C A1167 52.809 84.167 178.888 1.00 94.22 N
ATOM 20 C5 C A1167 53.218 82.297 177.452 1.00 94.90 C
ATOM 21 C6 C A1167 53.497 80.987 177.373 1.00 94.72 C
ATOM 22 P C A1168 49.411 76.942 177.746 1.00 83.82 P
ATOM 23 OP1 C A1168 48.865 75.665 177.220 1.00 83.00 O
ATOM 24 OP2 C A1168 49.271 78.178 176.939 1.00 83.62 O
ATOM 25 O5' C A1168 48.784 77.219 179.179 1.00 82.80 O
TER
ATOM 1 O3' U B1165 54.887 86.076 173.667 1.00113.47 O
ATOM 2 P A B1166 53.921 84.846 174.022 1.00110.21 P
ATOM 3 OP1 A B1166 52.587 85.142 173.443 1.00110.64 O
ATOM 4 OP2 A B1166 54.040 84.543 175.474 1.00109.49 O
ATOM 5 O5' A B1166 54.560 83.644 173.202 1.00107.79 O
ATOM 6 C5' A B1166 54.237 82.298 173.531 1.00104.77 C
ATOM 7 C4' A B1166 55.471 81.436 173.487 1.00102.37 C
ATOM 8 O4' A B1166 56.540 82.050 174.246 1.00102.14 O
ATOM 9 C3' A B1166 55.268 80.081 174.131 1.00100.48 C
ATOM 10 O3' A B1166 54.665 79.203 173.192 1.00 98.05 O
ATOM 11 C2' A B1166 56.684 79.694 174.536 1.00100.56 C
ATOM 12 O2' A B1166 57.449 79.191 173.460 1.00100.49 O
ATOM 13 C1' A B1166 57.255 81.052 174.956 1.00101.08 C
ATOM 14 N9 A B1166 57.135 81.350 176.383 1.00101.19 N
ATOM 15 C8 A B1166 56.483 82.413 176.959 1.00101.40 C
ATOM 16 N7 A B1166 56.548 82.430 178.266 1.00101.69 N
ATOM 17 C5 A B1166 57.291 81.301 178.576 1.00102.30 C
ATOM 18 C6 A B1166 57.706 80.752 179.800 1.00102.70 C
ATOM 19 N6 A B1166 57.419 81.289 180.988 1.00102.48 N
ATOM 20 N1 A B1166 58.433 79.613 179.763 1.00103.17 N
ATOM 21 C2 A B1166 58.714 79.071 178.570 1.00103.19 C
ATOM 22 N3 A B1166 58.377 79.492 177.352 1.00102.67 N
ATOM 23 C4 A B1166 57.659 80.625 177.426 1.00101.99 C
ATOM 24 P C B1167 53.084 78.931 173.263 1.00 95.60 P
ATOM 25 OP1 C B1167 52.669 78.315 171.976 1.00 96.26 O
ATOM 26 OP2 C B1167 52.387 80.151 173.747 1.00 94.97 O
ATOM 27 O5' C B1167 52.971 77.826 174.393 1.00 94.52 O
TER
ATOM 2 P C A1167 53.084 78.931 173.263 1.00 95.60 P
ATOM 3 OP1 C A1167 52.669 78.315 171.976 1.00 96.26 O
ATOM 4 OP2 C A1167 52.387 80.151 173.747 1.00 94.97 O
ATOM 5 O5' C A1167 52.971 77.826 174.393 1.00 94.52 O
ATOM 6 C5' C A1167 52.082 77.999 175.486 1.00 92.51 C
ATOM 7 C4' C A1167 52.750 77.582 176.764 1.00 90.92 C
ATOM 8 O4' C A1167 53.913 78.413 177.024 1.00 91.11 O
ATOM 9 C3' C A1167 51.863 77.789 177.968 1.00 89.57 C
ATOM 10 O3' C A1167 50.961 76.709 178.085 1.00 85.98 O
ATOM 11 C2' C A1167 52.878 77.915 179.087 1.00 91.04 C
ATOM 12 O2' C A1167 53.436 76.667 179.441 1.00 91.79 O
ATOM 13 C1' C A1167 53.945 78.773 178.400 1.00 92.34 C
ATOM 14 N1 C A1167 53.664 80.227 178.502 1.00 94.28 N
ATOM 15 C2 C A1167 53.558 80.827 179.779 1.00 94.98 C
ATOM 16 O2 C A1167 53.729 80.131 180.795 1.00 95.06 O
ATOM 17 N3 C A1167 53.273 82.150 179.865 1.00 95.41 N
ATOM 18 C4 C A1167 53.101 82.872 178.753 1.00 95.13 C
ATOM 19 N4 C A1167 52.809 84.167 178.888 1.00 94.22 N
ATOM 20 C5 C A1167 53.218 82.297 177.452 1.00 94.90 C
ATOM 21 C6 C A1167 53.497 80.987 177.373 1.00 94.72 C
ATOM 22 P C A1168 49.411 76.942 177.746 1.00 83.82 P
ATOM 23 OP1 C A1168 48.865 75.665 177.220 1.00 83.00 O
ATOM 24 OP2 C A1168 49.271 78.178 176.939 1.00 83.62 O
ATOM 25 O5' C A1168 48.784 77.219 179.179 1.00 82.80 O
TER
ATOM 1 O3' U B1165 54.887 86.076 173.667 1.00113.47 O
ATOM 2 P A B1166 53.921 84.846 174.022 1.00110.21 P
ATOM 3 OP1 A B1166 52.587 85.142 173.443 1.00110.64 O
ATOM 4 OP2 A B1166 54.040 84.543 175.474 1.00109.49 O
ATOM 5 O5' A B1166 54.560 83.644 173.202 1.00107.79 O
ATOM 6 C5' A B1166 54.237 82.298 173.531 1.00104.77 C
ATOM 7 C4' A B1166 55.471 81.436 173.487 1.00102.37 C
ATOM 8 O4' A B1166 56.540 82.050 174.246 1.00102.14 O
ATOM 9 C3' A B1166 55.268 80.081 174.131 1.00100.48 C
ATOM 10 O3' A B1166 54.665 79.203 173.192 1.00 98.05 O
ATOM 11 C2' A B1166 56.684 79.694 174.536 1.00100.56 C
ATOM 12 O2' A B1166 57.449 79.191 173.460 1.00100.49 O
ATOM 13 C1' A B1166 57.255 81.052 174.956 1.00101.08 C
ATOM 14 N9 A B1166 57.135 81.350 176.383 1.00101.19 N
ATOM 15 C8 A B1166 56.483 82.413 176.959 1.00101.40 C
ATOM 16 N7 A B1166 56.548 82.430 178.266 1.00101.69 N
ATOM 17 C5 A B1166 57.291 81.301 178.576 1.00102.30 C
ATOM 18 C6 A B1166 57.706 80.752 179.800 1.00102.70 C
ATOM 19 N6 A B1166 57.419 81.289 180.988 1.00102.48 N
ATOM 20 N1 A B1166 58.433 79.613 179.763 1.00103.17 N
ATOM 21 C2 A B1166 58.714 79.071 178.570 1.00103.19 C
ATOM 22 N3 A B1166 58.377 79.492 177.352 1.00102.67 N
ATOM 23 C4 A B1166 57.659 80.625 177.426 1.00101.99 C
ATOM 24 P C B1167 53.084 78.931 173.263 1.00 95.60 P
ATOM 25 OP1 C B1167 52.669 78.315 171.976 1.00 96.26 O
ATOM 26 OP2 C B1167 52.387 80.151 173.747 1.00 94.97 O
ATOM 27 O5' C B1167 52.971 77.826 174.393 1.00 94.52 O
TER
Atoms:
C2: (53.558,80.827,179.779)
OP1: (52.669,78.315,171.976)
OP2: (52.387,80.151,173.747)
C4: (53.101,82.872,178.753)
O5': (52.971,77.826,174.393)
C3': (51.863,77.789,177.968)
C1': (53.945,78.773,178.400)
O4': (53.913,78.413,177.024)
C5': (52.082,77.999,175.486)
P: (53.084,78.931,173.263)
O2: (53.729,80.131,180.795)
C4': (52.750,77.582,176.764)
C2': (52.878,77.915,179.087)
O2': (53.436,76.667,179.441)
N1: (53.664,80.227,178.502)
N3: (53.273,82.150,179.865)
N4: (52.809,84.167,178.888)
C6: (53.497,80.987,177.373)
C5: (53.218,82.297,177.452)
O3': (50.961,76.709,178.085)
OP1: (52.669,78.315,171.976)
OP2: (52.387,80.151,173.747)
C4: (53.101,82.872,178.753)
O5': (52.971,77.826,174.393)
C3': (51.863,77.789,177.968)
C1': (53.945,78.773,178.400)
O4': (53.913,78.413,177.024)
C5': (52.082,77.999,175.486)
P: (53.084,78.931,173.263)
O2: (53.729,80.131,180.795)
C4': (52.750,77.582,176.764)
C2': (52.878,77.915,179.087)
O2': (53.436,76.667,179.441)
N1: (53.664,80.227,178.502)
N3: (53.273,82.150,179.865)
N4: (52.809,84.167,178.888)
C6: (53.497,80.987,177.373)
C5: (53.218,82.297,177.452)
O3': (50.961,76.709,178.085)
OP1: (52.587,85.142,173.443)
OP2: (54.040,84.543,175.474)
C3': (55.268,80.081,174.131)
C1': (57.255,81.052,174.956)
C5': (54.237,82.298,173.531)
O4': (56.540,82.050,174.246)
C8: (56.483,82.413,176.959)
O2': (57.449,79.191,173.460)
C6: (57.706,80.752,179.800)
C5: (57.291,81.301,178.576)
C4: (57.659,80.625,177.426)
P: (53.921,84.846,174.022)
C4': (55.471,81.436,173.487)
C2': (56.684,79.694,174.536)
C2: (58.714,79.071,178.570)
N1: (58.433,79.613,179.763)
N3: (58.377,79.492,177.352)
N6: (57.419,81.289,180.988)
N7: (56.548,82.430,178.266)
N9: (57.135,81.350,176.383)
O5': (54.560,83.644,173.202)
O3': (54.665,79.203,173.192)
OP2: (54.040,84.543,175.474)
C3': (55.268,80.081,174.131)
C1': (57.255,81.052,174.956)
C5': (54.237,82.298,173.531)
O4': (56.540,82.050,174.246)
C8: (56.483,82.413,176.959)
O2': (57.449,79.191,173.460)
C6: (57.706,80.752,179.800)
C5: (57.291,81.301,178.576)
C4: (57.659,80.625,177.426)
P: (53.921,84.846,174.022)
C4': (55.471,81.436,173.487)
C2': (56.684,79.694,174.536)
C2: (58.714,79.071,178.570)
N1: (58.433,79.613,179.763)
N3: (58.377,79.492,177.352)
N6: (57.419,81.289,180.988)
N7: (56.548,82.430,178.266)
N9: (57.135,81.350,176.383)
O5': (54.560,83.644,173.202)
O3': (54.665,79.203,173.192)
Image (generated by PyMOL):