Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQO:0232:0231
Extra
PDB:
ATOM 1 O3' A A 231 93.186 103.647 -1.678 1.00 59.93 O
ATOM 2 P C A 232 93.950 104.690 -2.632 1.00 62.57 P
ATOM 3 OP1 C A 232 95.194 104.024 -3.113 1.00 59.64 O
ATOM 4 OP2 C A 232 94.038 106.000 -1.940 1.00 62.96 O
ATOM 5 O5' C A 232 92.952 104.880 -3.854 1.00 63.92 O
ATOM 6 C5' C A 232 92.501 103.758 -4.632 1.00 63.50 C
ATOM 7 C4' C A 232 91.434 104.211 -5.586 1.00 63.96 C
ATOM 8 O4' C A 232 90.210 104.483 -4.852 1.00 63.47 O
ATOM 9 C3' C A 232 91.776 105.530 -6.252 1.00 64.62 C
ATOM 10 O3' C A 232 92.646 105.355 -7.363 1.00 66.79 O
ATOM 11 C2' C A 232 90.407 106.102 -6.587 1.00 63.45 C
ATOM 12 O2' C A 232 89.840 105.548 -7.754 1.00 64.80 O
ATOM 13 C1' C A 232 89.600 105.660 -5.361 1.00 62.60 C
ATOM 14 N1 C A 232 89.575 106.672 -4.288 1.00 60.17 N
ATOM 15 C2 C A 232 88.560 107.628 -4.292 1.00 60.08 C
ATOM 16 O2 C A 232 87.712 107.599 -5.195 1.00 60.55 O
ATOM 17 N3 C A 232 88.524 108.560 -3.312 1.00 59.56 N
ATOM 18 C4 C A 232 89.455 108.558 -2.354 1.00 59.89 C
ATOM 19 N4 C A 232 89.378 109.491 -1.405 1.00 58.89 N
ATOM 20 C5 C A 232 90.506 107.597 -2.327 1.00 59.31 C
ATOM 21 C6 C A 232 90.527 106.682 -3.303 1.00 60.75 C
ATOM 22 P C A 233 93.548 106.587 -7.863 1.00 66.97 P
ATOM 23 OP1 C A 233 94.294 106.115 -9.062 1.00 68.11 O
ATOM 24 OP2 C A 233 94.300 107.145 -6.712 1.00 66.55 O
ATOM 25 O5' C A 233 92.454 107.650 -8.313 1.00 64.06 O
TER
ATOM 1 O3' A B 230 92.499 107.302 3.146 1.00 51.15 O
ATOM 2 P A B 231 92.689 107.711 1.602 1.00 51.02 P
ATOM 3 OP1 A B 231 94.124 108.056 1.432 1.00 50.81 O
ATOM 4 OP2 A B 231 91.642 108.703 1.224 1.00 47.56 O
ATOM 5 O5' A B 231 92.367 106.360 0.819 1.00 50.43 O
ATOM 6 C5' A B 231 93.042 105.135 1.148 1.00 52.12 C
ATOM 7 C4' A B 231 92.305 103.960 0.546 1.00 55.24 C
ATOM 8 O4' A B 231 90.982 103.847 1.134 1.00 52.69 O
ATOM 9 C3' A B 231 92.040 104.063 -0.948 1.00 56.60 C
ATOM 10 O3' A B 231 93.186 103.647 -1.678 1.00 59.93 O
ATOM 11 C2' A B 231 90.861 103.115 -1.136 1.00 55.37 C
ATOM 12 O2' A B 231 91.258 101.759 -1.209 1.00 57.20 O
ATOM 13 C1' A B 231 90.078 103.342 0.165 1.00 52.91 C
ATOM 14 N9 A B 231 88.964 104.278 0.025 1.00 49.61 N
ATOM 15 C8 A B 231 89.001 105.639 -0.171 1.00 48.85 C
ATOM 16 N7 A B 231 87.815 106.185 -0.306 1.00 48.29 N
ATOM 17 C5 A B 231 86.938 105.114 -0.181 1.00 48.54 C
ATOM 18 C6 A B 231 85.532 105.023 -0.242 1.00 48.83 C
ATOM 19 N6 A B 231 84.725 106.066 -0.472 1.00 49.99 N
ATOM 20 N1 A B 231 84.975 103.805 -0.065 1.00 47.12 N
ATOM 21 C2 A B 231 85.779 102.756 0.146 1.00 47.17 C
ATOM 22 N3 A B 231 87.108 102.711 0.213 1.00 47.42 N
ATOM 23 C4 A B 231 87.633 103.937 0.040 1.00 48.30 C
ATOM 24 P C B 232 93.950 104.690 -2.632 1.00 62.57 P
ATOM 25 OP1 C B 232 95.194 104.024 -3.113 1.00 59.64 O
ATOM 26 OP2 C B 232 94.038 106.000 -1.940 1.00 62.96 O
ATOM 27 O5' C B 232 92.952 104.880 -3.854 1.00 63.92 O
TER
ATOM 2 P C A 232 93.950 104.690 -2.632 1.00 62.57 P
ATOM 3 OP1 C A 232 95.194 104.024 -3.113 1.00 59.64 O
ATOM 4 OP2 C A 232 94.038 106.000 -1.940 1.00 62.96 O
ATOM 5 O5' C A 232 92.952 104.880 -3.854 1.00 63.92 O
ATOM 6 C5' C A 232 92.501 103.758 -4.632 1.00 63.50 C
ATOM 7 C4' C A 232 91.434 104.211 -5.586 1.00 63.96 C
ATOM 8 O4' C A 232 90.210 104.483 -4.852 1.00 63.47 O
ATOM 9 C3' C A 232 91.776 105.530 -6.252 1.00 64.62 C
ATOM 10 O3' C A 232 92.646 105.355 -7.363 1.00 66.79 O
ATOM 11 C2' C A 232 90.407 106.102 -6.587 1.00 63.45 C
ATOM 12 O2' C A 232 89.840 105.548 -7.754 1.00 64.80 O
ATOM 13 C1' C A 232 89.600 105.660 -5.361 1.00 62.60 C
ATOM 14 N1 C A 232 89.575 106.672 -4.288 1.00 60.17 N
ATOM 15 C2 C A 232 88.560 107.628 -4.292 1.00 60.08 C
ATOM 16 O2 C A 232 87.712 107.599 -5.195 1.00 60.55 O
ATOM 17 N3 C A 232 88.524 108.560 -3.312 1.00 59.56 N
ATOM 18 C4 C A 232 89.455 108.558 -2.354 1.00 59.89 C
ATOM 19 N4 C A 232 89.378 109.491 -1.405 1.00 58.89 N
ATOM 20 C5 C A 232 90.506 107.597 -2.327 1.00 59.31 C
ATOM 21 C6 C A 232 90.527 106.682 -3.303 1.00 60.75 C
ATOM 22 P C A 233 93.548 106.587 -7.863 1.00 66.97 P
ATOM 23 OP1 C A 233 94.294 106.115 -9.062 1.00 68.11 O
ATOM 24 OP2 C A 233 94.300 107.145 -6.712 1.00 66.55 O
ATOM 25 O5' C A 233 92.454 107.650 -8.313 1.00 64.06 O
TER
ATOM 1 O3' A B 230 92.499 107.302 3.146 1.00 51.15 O
ATOM 2 P A B 231 92.689 107.711 1.602 1.00 51.02 P
ATOM 3 OP1 A B 231 94.124 108.056 1.432 1.00 50.81 O
ATOM 4 OP2 A B 231 91.642 108.703 1.224 1.00 47.56 O
ATOM 5 O5' A B 231 92.367 106.360 0.819 1.00 50.43 O
ATOM 6 C5' A B 231 93.042 105.135 1.148 1.00 52.12 C
ATOM 7 C4' A B 231 92.305 103.960 0.546 1.00 55.24 C
ATOM 8 O4' A B 231 90.982 103.847 1.134 1.00 52.69 O
ATOM 9 C3' A B 231 92.040 104.063 -0.948 1.00 56.60 C
ATOM 10 O3' A B 231 93.186 103.647 -1.678 1.00 59.93 O
ATOM 11 C2' A B 231 90.861 103.115 -1.136 1.00 55.37 C
ATOM 12 O2' A B 231 91.258 101.759 -1.209 1.00 57.20 O
ATOM 13 C1' A B 231 90.078 103.342 0.165 1.00 52.91 C
ATOM 14 N9 A B 231 88.964 104.278 0.025 1.00 49.61 N
ATOM 15 C8 A B 231 89.001 105.639 -0.171 1.00 48.85 C
ATOM 16 N7 A B 231 87.815 106.185 -0.306 1.00 48.29 N
ATOM 17 C5 A B 231 86.938 105.114 -0.181 1.00 48.54 C
ATOM 18 C6 A B 231 85.532 105.023 -0.242 1.00 48.83 C
ATOM 19 N6 A B 231 84.725 106.066 -0.472 1.00 49.99 N
ATOM 20 N1 A B 231 84.975 103.805 -0.065 1.00 47.12 N
ATOM 21 C2 A B 231 85.779 102.756 0.146 1.00 47.17 C
ATOM 22 N3 A B 231 87.108 102.711 0.213 1.00 47.42 N
ATOM 23 C4 A B 231 87.633 103.937 0.040 1.00 48.30 C
ATOM 24 P C B 232 93.950 104.690 -2.632 1.00 62.57 P
ATOM 25 OP1 C B 232 95.194 104.024 -3.113 1.00 59.64 O
ATOM 26 OP2 C B 232 94.038 106.000 -1.940 1.00 62.96 O
ATOM 27 O5' C B 232 92.952 104.880 -3.854 1.00 63.92 O
TER
Atoms:
C2: (88.560,107.628,-4.292)
OP1: (95.194,104.024,-3.113)
OP2: (94.038,106.000,-1.940)
C4: (89.455,108.558,-2.354)
O5': (92.952,104.880,-3.854)
C3': (91.776,105.530,-6.252)
C1': (89.600,105.660,-5.361)
O4': (90.210,104.483,-4.852)
C5': (92.501,103.758,-4.632)
P: (93.950,104.690,-2.632)
O2: (87.712,107.599,-5.195)
C4': (91.434,104.211,-5.586)
C2': (90.407,106.102,-6.587)
O2': (89.840,105.548,-7.754)
N1: (89.575,106.672,-4.288)
N3: (88.524,108.560,-3.312)
N4: (89.378,109.491,-1.405)
C6: (90.527,106.682,-3.303)
C5: (90.506,107.597,-2.327)
O3': (92.646,105.355,-7.363)
OP1: (95.194,104.024,-3.113)
OP2: (94.038,106.000,-1.940)
C4: (89.455,108.558,-2.354)
O5': (92.952,104.880,-3.854)
C3': (91.776,105.530,-6.252)
C1': (89.600,105.660,-5.361)
O4': (90.210,104.483,-4.852)
C5': (92.501,103.758,-4.632)
P: (93.950,104.690,-2.632)
O2: (87.712,107.599,-5.195)
C4': (91.434,104.211,-5.586)
C2': (90.407,106.102,-6.587)
O2': (89.840,105.548,-7.754)
N1: (89.575,106.672,-4.288)
N3: (88.524,108.560,-3.312)
N4: (89.378,109.491,-1.405)
C6: (90.527,106.682,-3.303)
C5: (90.506,107.597,-2.327)
O3': (92.646,105.355,-7.363)
OP1: (94.124,108.056,1.432)
OP2: (91.642,108.703,1.224)
C3': (92.040,104.063,-0.948)
C1': (90.078,103.342,0.165)
C5': (93.042,105.135,1.148)
O4': (90.982,103.847,1.134)
C8: (89.001,105.639,-0.171)
O2': (91.258,101.759,-1.209)
C6: (85.532,105.023,-0.242)
C5: (86.938,105.114,-0.181)
C4: (87.633,103.937,0.040)
P: (92.689,107.711,1.602)
C4': (92.305,103.960,0.546)
C2': (90.861,103.115,-1.136)
C2: (85.779,102.756,0.146)
N1: (84.975,103.805,-0.065)
N3: (87.108,102.711,0.213)
N6: (84.725,106.066,-0.472)
N7: (87.815,106.185,-0.306)
N9: (88.964,104.278,0.025)
O5': (92.367,106.360,0.819)
O3': (93.186,103.647,-1.678)
OP2: (91.642,108.703,1.224)
C3': (92.040,104.063,-0.948)
C1': (90.078,103.342,0.165)
C5': (93.042,105.135,1.148)
O4': (90.982,103.847,1.134)
C8: (89.001,105.639,-0.171)
O2': (91.258,101.759,-1.209)
C6: (85.532,105.023,-0.242)
C5: (86.938,105.114,-0.181)
C4: (87.633,103.937,0.040)
P: (92.689,107.711,1.602)
C4': (92.305,103.960,0.546)
C2': (90.861,103.115,-1.136)
C2: (85.779,102.756,0.146)
N1: (84.975,103.805,-0.065)
N3: (87.108,102.711,0.213)
N6: (84.725,106.066,-0.472)
N7: (87.815,106.185,-0.306)
N9: (88.964,104.278,0.025)
O5': (92.367,106.360,0.819)
O3': (93.186,103.647,-1.678)
Image (generated by PyMOL):