Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1XMQ:A542:A541
Extra
PDB:
ATOM 1 O3' A A 541 146.618 102.967 -17.456 1.00 31.18 O
ATOM 2 P C A 542 146.082 102.367 -18.838 1.00 37.98 P
ATOM 3 OP1 C A 542 146.540 100.955 -18.900 1.00 49.59 O
ATOM 4 OP2 C A 542 146.394 103.300 -19.951 1.00 49.59 O
ATOM 5 O5' C A 542 144.507 102.348 -18.612 1.00 37.98 O
ATOM 6 C5' C A 542 143.577 102.705 -19.652 1.00 37.98 C
ATOM 7 C4' C A 542 142.255 103.101 -19.030 1.00 37.98 C
ATOM 8 O4' C A 542 141.699 101.964 -18.315 1.00 37.98 O
ATOM 9 C3' C A 542 142.381 104.196 -17.981 1.00 37.98 C
ATOM 10 O3' C A 542 142.265 105.481 -18.566 1.00 37.98 O
ATOM 11 C2' C A 542 141.220 103.934 -17.039 1.00 37.98 C
ATOM 12 O2' C A 542 140.050 104.589 -17.461 1.00 37.98 O
ATOM 13 C1' C A 542 141.048 102.413 -17.140 1.00 37.98 C
ATOM 14 N1 C A 542 141.575 101.675 -15.980 1.00 49.59 N
ATOM 15 C2 C A 542 140.995 101.885 -14.722 1.00 49.59 C
ATOM 16 O2 C A 542 140.067 102.705 -14.612 1.00 49.59 O
ATOM 17 N3 C A 542 141.462 101.199 -13.658 1.00 49.59 N
ATOM 18 C4 C A 542 142.461 100.341 -13.810 1.00 49.59 C
ATOM 19 N4 C A 542 142.876 99.673 -12.740 1.00 49.59 N
ATOM 20 C5 C A 542 143.079 100.123 -15.067 1.00 49.59 C
ATOM 21 C6 C A 542 142.609 100.800 -16.116 1.00 49.59 C
ATOM 22 P U A 543 143.232 106.667 -18.075 1.00 42.02 P
ATOM 23 OP1 U A 543 142.953 107.843 -18.943 1.00 50.34 O
ATOM 24 OP2 U A 543 144.629 106.134 -17.986 1.00 50.34 O
ATOM 25 O5' U A 543 142.714 107.002 -16.604 1.00 42.02 O
TER
ATOM 1 O3' C B 540 149.039 97.845 -15.629 1.00 41.12 O
ATOM 2 P A B 541 147.858 98.648 -14.867 1.00 31.18 P
ATOM 3 OP1 A B 541 147.972 98.552 -13.385 1.00 46.15 O
ATOM 4 OP2 A B 541 146.584 98.253 -15.523 1.00 46.15 O
ATOM 5 O5' A B 541 148.140 100.154 -15.294 1.00 31.18 O
ATOM 6 C5' A B 541 147.308 101.205 -14.836 1.00 31.18 C
ATOM 7 C4' A B 541 147.761 102.507 -15.419 1.00 31.18 C
ATOM 8 O4' A B 541 149.084 102.821 -14.946 1.00 31.18 O
ATOM 9 C3' A B 541 147.876 102.568 -16.934 1.00 31.18 C
ATOM 10 O3' A B 541 146.618 102.967 -17.456 1.00 31.18 O
ATOM 11 C2' A B 541 148.886 103.698 -17.162 1.00 31.18 C
ATOM 12 O2' A B 541 148.277 104.934 -17.447 1.00 31.18 O
ATOM 13 C1' A B 541 149.630 103.781 -15.818 1.00 31.18 C
ATOM 14 N9 A B 541 151.077 103.619 -15.879 1.00 46.15 N
ATOM 15 C8 A B 541 151.980 104.317 -15.129 1.00 46.15 C
ATOM 16 N7 A B 541 153.228 104.034 -15.406 1.00 46.15 N
ATOM 17 C5 A B 541 153.138 103.069 -16.398 1.00 46.15 C
ATOM 18 C6 A B 541 154.107 102.368 -17.109 1.00 46.15 C
ATOM 19 N6 A B 541 155.410 102.548 -16.935 1.00 46.15 N
ATOM 20 N1 A B 541 153.690 101.467 -18.021 1.00 46.15 N
ATOM 21 C2 A B 541 152.379 101.299 -18.199 1.00 46.15 C
ATOM 22 N3 A B 541 151.368 101.903 -17.594 1.00 46.15 N
ATOM 23 C4 A B 541 151.818 102.791 -16.690 1.00 46.15 C
ATOM 24 P C B 542 146.082 102.367 -18.838 1.00 37.98 P
ATOM 25 OP1 C B 542 146.540 100.955 -18.900 1.00 49.59 O
ATOM 26 OP2 C B 542 146.394 103.300 -19.951 1.00 49.59 O
ATOM 27 O5' C B 542 144.507 102.348 -18.612 1.00 37.98 O
TER
ATOM 2 P C A 542 146.082 102.367 -18.838 1.00 37.98 P
ATOM 3 OP1 C A 542 146.540 100.955 -18.900 1.00 49.59 O
ATOM 4 OP2 C A 542 146.394 103.300 -19.951 1.00 49.59 O
ATOM 5 O5' C A 542 144.507 102.348 -18.612 1.00 37.98 O
ATOM 6 C5' C A 542 143.577 102.705 -19.652 1.00 37.98 C
ATOM 7 C4' C A 542 142.255 103.101 -19.030 1.00 37.98 C
ATOM 8 O4' C A 542 141.699 101.964 -18.315 1.00 37.98 O
ATOM 9 C3' C A 542 142.381 104.196 -17.981 1.00 37.98 C
ATOM 10 O3' C A 542 142.265 105.481 -18.566 1.00 37.98 O
ATOM 11 C2' C A 542 141.220 103.934 -17.039 1.00 37.98 C
ATOM 12 O2' C A 542 140.050 104.589 -17.461 1.00 37.98 O
ATOM 13 C1' C A 542 141.048 102.413 -17.140 1.00 37.98 C
ATOM 14 N1 C A 542 141.575 101.675 -15.980 1.00 49.59 N
ATOM 15 C2 C A 542 140.995 101.885 -14.722 1.00 49.59 C
ATOM 16 O2 C A 542 140.067 102.705 -14.612 1.00 49.59 O
ATOM 17 N3 C A 542 141.462 101.199 -13.658 1.00 49.59 N
ATOM 18 C4 C A 542 142.461 100.341 -13.810 1.00 49.59 C
ATOM 19 N4 C A 542 142.876 99.673 -12.740 1.00 49.59 N
ATOM 20 C5 C A 542 143.079 100.123 -15.067 1.00 49.59 C
ATOM 21 C6 C A 542 142.609 100.800 -16.116 1.00 49.59 C
ATOM 22 P U A 543 143.232 106.667 -18.075 1.00 42.02 P
ATOM 23 OP1 U A 543 142.953 107.843 -18.943 1.00 50.34 O
ATOM 24 OP2 U A 543 144.629 106.134 -17.986 1.00 50.34 O
ATOM 25 O5' U A 543 142.714 107.002 -16.604 1.00 42.02 O
TER
ATOM 1 O3' C B 540 149.039 97.845 -15.629 1.00 41.12 O
ATOM 2 P A B 541 147.858 98.648 -14.867 1.00 31.18 P
ATOM 3 OP1 A B 541 147.972 98.552 -13.385 1.00 46.15 O
ATOM 4 OP2 A B 541 146.584 98.253 -15.523 1.00 46.15 O
ATOM 5 O5' A B 541 148.140 100.154 -15.294 1.00 31.18 O
ATOM 6 C5' A B 541 147.308 101.205 -14.836 1.00 31.18 C
ATOM 7 C4' A B 541 147.761 102.507 -15.419 1.00 31.18 C
ATOM 8 O4' A B 541 149.084 102.821 -14.946 1.00 31.18 O
ATOM 9 C3' A B 541 147.876 102.568 -16.934 1.00 31.18 C
ATOM 10 O3' A B 541 146.618 102.967 -17.456 1.00 31.18 O
ATOM 11 C2' A B 541 148.886 103.698 -17.162 1.00 31.18 C
ATOM 12 O2' A B 541 148.277 104.934 -17.447 1.00 31.18 O
ATOM 13 C1' A B 541 149.630 103.781 -15.818 1.00 31.18 C
ATOM 14 N9 A B 541 151.077 103.619 -15.879 1.00 46.15 N
ATOM 15 C8 A B 541 151.980 104.317 -15.129 1.00 46.15 C
ATOM 16 N7 A B 541 153.228 104.034 -15.406 1.00 46.15 N
ATOM 17 C5 A B 541 153.138 103.069 -16.398 1.00 46.15 C
ATOM 18 C6 A B 541 154.107 102.368 -17.109 1.00 46.15 C
ATOM 19 N6 A B 541 155.410 102.548 -16.935 1.00 46.15 N
ATOM 20 N1 A B 541 153.690 101.467 -18.021 1.00 46.15 N
ATOM 21 C2 A B 541 152.379 101.299 -18.199 1.00 46.15 C
ATOM 22 N3 A B 541 151.368 101.903 -17.594 1.00 46.15 N
ATOM 23 C4 A B 541 151.818 102.791 -16.690 1.00 46.15 C
ATOM 24 P C B 542 146.082 102.367 -18.838 1.00 37.98 P
ATOM 25 OP1 C B 542 146.540 100.955 -18.900 1.00 49.59 O
ATOM 26 OP2 C B 542 146.394 103.300 -19.951 1.00 49.59 O
ATOM 27 O5' C B 542 144.507 102.348 -18.612 1.00 37.98 O
TER
Atoms:
C2: (140.995,101.885,-14.722)
OP1: (146.540,100.955,-18.900)
OP2: (146.394,103.300,-19.951)
C4: (142.461,100.341,-13.810)
O5': (144.507,102.348,-18.612)
C3': (142.381,104.196,-17.981)
C1': (141.048,102.413,-17.140)
O4': (141.699,101.964,-18.315)
C5': (143.577,102.705,-19.652)
P: (146.082,102.367,-18.838)
O2: (140.067,102.705,-14.612)
C4': (142.255,103.101,-19.030)
C2': (141.220,103.934,-17.039)
O2': (140.050,104.589,-17.461)
N1: (141.575,101.675,-15.980)
N3: (141.462,101.199,-13.658)
N4: (142.876,99.673,-12.740)
C6: (142.609,100.800,-16.116)
C5: (143.079,100.123,-15.067)
O3': (142.265,105.481,-18.566)
OP1: (146.540,100.955,-18.900)
OP2: (146.394,103.300,-19.951)
C4: (142.461,100.341,-13.810)
O5': (144.507,102.348,-18.612)
C3': (142.381,104.196,-17.981)
C1': (141.048,102.413,-17.140)
O4': (141.699,101.964,-18.315)
C5': (143.577,102.705,-19.652)
P: (146.082,102.367,-18.838)
O2: (140.067,102.705,-14.612)
C4': (142.255,103.101,-19.030)
C2': (141.220,103.934,-17.039)
O2': (140.050,104.589,-17.461)
N1: (141.575,101.675,-15.980)
N3: (141.462,101.199,-13.658)
N4: (142.876,99.673,-12.740)
C6: (142.609,100.800,-16.116)
C5: (143.079,100.123,-15.067)
O3': (142.265,105.481,-18.566)
OP1: (147.972,98.552,-13.385)
OP2: (146.584,98.253,-15.523)
C3': (147.876,102.568,-16.934)
C1': (149.630,103.781,-15.818)
C5': (147.308,101.205,-14.836)
O4': (149.084,102.821,-14.946)
C8: (151.980,104.317,-15.129)
O2': (148.277,104.934,-17.447)
C6: (154.107,102.368,-17.109)
C5: (153.138,103.069,-16.398)
C4: (151.818,102.791,-16.690)
P: (147.858,98.648,-14.867)
C4': (147.761,102.507,-15.419)
C2': (148.886,103.698,-17.162)
C2: (152.379,101.299,-18.199)
N1: (153.690,101.467,-18.021)
N3: (151.368,101.903,-17.594)
N6: (155.410,102.548,-16.935)
N7: (153.228,104.034,-15.406)
N9: (151.077,103.619,-15.879)
O5': (148.140,100.154,-15.294)
O3': (146.618,102.967,-17.456)
OP2: (146.584,98.253,-15.523)
C3': (147.876,102.568,-16.934)
C1': (149.630,103.781,-15.818)
C5': (147.308,101.205,-14.836)
O4': (149.084,102.821,-14.946)
C8: (151.980,104.317,-15.129)
O2': (148.277,104.934,-17.447)
C6: (154.107,102.368,-17.109)
C5: (153.138,103.069,-16.398)
C4: (151.818,102.791,-16.690)
P: (147.858,98.648,-14.867)
C4': (147.761,102.507,-15.419)
C2': (148.886,103.698,-17.162)
C2: (152.379,101.299,-18.199)
N1: (153.690,101.467,-18.021)
N3: (151.368,101.903,-17.594)
N6: (155.410,102.548,-16.935)
N7: (153.228,104.034,-15.406)
N9: (151.077,103.619,-15.879)
O5': (148.140,100.154,-15.294)
O3': (146.618,102.967,-17.456)
Image (generated by PyMOL):