ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQF:A1312:A1214

Extra

PDB:
ATOM 1 O3' C A1311 246.455 117.852 -18.678 1.00 74.64 O
ATOM 2 P C A1312 245.333 117.532 -19.783 1.00 74.60 P
ATOM 3 OP1 C A1312 245.269 116.047 -19.957 1.00 74.98 O
ATOM 4 OP2 C A1312 245.580 118.413 -20.954 1.00 75.52 O
ATOM 5 O5' C A1312 243.991 117.989 -19.091 1.00 74.66 O
ATOM 6 C5' C A1312 243.199 117.081 -18.296 1.00 73.28 C
ATOM 7 C4' C A1312 242.050 117.833 -17.682 1.00 71.86 C
ATOM 8 O4' C A1312 242.559 118.658 -16.609 1.00 71.78 O
ATOM 9 C3' C A1312 241.360 118.776 -18.658 1.00 71.41 C
ATOM 10 O3' C A1312 239.983 118.849 -18.336 1.00 71.37 O
ATOM 11 C2' C A1312 242.044 120.110 -18.381 1.00 71.20 C
ATOM 12 O2' C A1312 241.249 121.231 -18.677 1.00 71.37 O
ATOM 13 C1' C A1312 242.296 120.019 -16.882 1.00 72.64 C
ATOM 14 N1 C A1312 243.437 120.823 -16.394 1.00 75.71 N
ATOM 15 C2 C A1312 243.220 122.163 -16.007 1.00 76.17 C
ATOM 16 O2 C A1312 242.080 122.651 -16.109 1.00 77.00 O
ATOM 17 N3 C A1312 244.261 122.884 -15.529 1.00 76.92 N
ATOM 18 C4 C A1312 245.474 122.324 -15.428 1.00 76.78 C
ATOM 19 N4 C A1312 246.473 123.063 -14.933 1.00 76.33 N
ATOM 20 C5 C A1312 245.720 120.980 -15.825 1.00 75.63 C
ATOM 21 C6 C A1312 244.688 120.275 -16.300 1.00 75.33 C
ATOM 22 P G A1313 238.871 118.563 -19.466 1.00 70.21 P
ATOM 23 OP1 G A1313 239.563 118.391 -20.774 1.00 71.25 O
ATOM 24 OP2 G A1313 237.835 119.624 -19.345 1.00 69.10 O
ATOM 25 O5' G A1313 238.249 117.165 -19.009 1.00 67.99 O
TER

ATOM 1 O3' C B1213 250.126 120.972 -14.323 1.00 74.91 O
ATOM 2 P A B1214 250.019 121.255 -15.903 1.00 75.76 P
ATOM 3 OP1 A B1214 248.649 120.901 -16.353 1.00 75.67 O
ATOM 4 OP2 A B1214 251.193 120.593 -16.556 1.00 79.09 O
ATOM 5 O5' A B1214 250.209 122.825 -16.016 1.00 74.41 O
ATOM 6 C5' A B1214 249.093 123.693 -15.951 1.00 74.44 C
ATOM 7 C4' A B1214 249.427 124.947 -15.176 1.00 74.49 C
ATOM 8 O4' A B1214 250.046 124.606 -13.910 1.00 74.71 O
ATOM 9 C3' A B1214 250.378 125.963 -15.776 1.00 73.62 C
ATOM 10 O3' A B1214 249.738 126.813 -16.698 1.00 74.33 O
ATOM 11 C2' A B1214 250.758 126.766 -14.546 1.00 74.73 C
ATOM 12 O2' A B1214 249.709 127.639 -14.188 1.00 75.67 O
ATOM 13 C1' A B1214 250.853 125.682 -13.478 1.00 75.45 C
ATOM 14 N9 A B1214 252.239 125.230 -13.342 1.00 77.98 N
ATOM 15 C8 A B1214 252.814 124.024 -13.666 1.00 78.14 C
ATOM 16 N7 A B1214 254.115 123.995 -13.491 1.00 78.44 N
ATOM 17 C5 A B1214 254.414 125.261 -13.001 1.00 80.30 C
ATOM 18 C6 A B1214 255.626 125.877 -12.624 1.00 80.79 C
ATOM 19 N6 A B1214 256.816 125.288 -12.711 1.00 81.79 N
ATOM 20 N1 A B1214 255.571 127.144 -12.155 1.00 80.61 N
ATOM 21 C2 A B1214 254.380 127.746 -12.082 1.00 81.00 C
ATOM 22 N3 A B1214 253.179 127.283 -12.419 1.00 80.95 N
ATOM 23 C4 A B1214 253.266 126.020 -12.878 1.00 79.74 C
ATOM 24 P A B1215 250.572 127.400 -17.943 1.00 76.05 P
ATOM 25 OP1 A B1215 249.647 128.151 -18.845 1.00 74.62 O
ATOM 26 OP2 A B1215 251.369 126.262 -18.459 1.00 76.64 O
ATOM 27 O5' A B1215 251.570 128.481 -17.301 1.00 76.68 O
TER

Atoms:
C2: (243.220,122.163,-16.007)
OP1: (245.269,116.047,-19.957)
OP2: (245.580,118.413,-20.954)
C4: (245.474,122.324,-15.428)
O5': (243.991,117.989,-19.091)
C3': (241.360,118.776,-18.658)
C1': (242.296,120.019,-16.882)
O4': (242.559,118.658,-16.609)
C5': (243.199,117.081,-18.296)
P: (245.333,117.532,-19.783)
O2: (242.080,122.651,-16.109)
C4': (242.050,117.833,-17.682)
C2': (242.044,120.110,-18.381)
O2': (241.249,121.231,-18.677)
N1: (243.437,120.823,-16.394)
N3: (244.261,122.884,-15.529)
N4: (246.473,123.063,-14.933)
C6: (244.688,120.275,-16.300)
C5: (245.720,120.980,-15.825)
O3': (239.983,118.849,-18.336)
OP1: (248.649,120.901,-16.353)
OP2: (251.193,120.593,-16.556)
C3': (250.378,125.963,-15.776)
C1': (250.853,125.682,-13.478)
C5': (249.093,123.693,-15.951)
O4': (250.046,124.606,-13.910)
C8: (252.814,124.024,-13.666)
O2': (249.709,127.639,-14.188)
C6: (255.626,125.877,-12.624)
C5: (254.414,125.261,-13.001)
C4: (253.266,126.020,-12.878)
P: (250.019,121.255,-15.903)
C4': (249.427,124.947,-15.176)
C2': (250.758,126.766,-14.546)
C2: (254.380,127.746,-12.082)
N1: (255.571,127.144,-12.155)
N3: (253.179,127.283,-12.419)
N6: (256.816,125.288,-12.711)
N7: (254.115,123.995,-13.491)
N9: (252.239,125.230,-13.342)
O5': (250.209,122.825,-16.016)
O3': (249.738,126.813,-16.698)
Image (generated by PyMOL):
PyMOL image
show in jmol