Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1319:A1317
Extra
PDB:
ATOM 1 O3' U A1318 49.585 127.104 80.830 1.00 31.52 O
ATOM 2 P C A1319 49.187 128.008 79.566 1.00 29.90 P
ATOM 3 OP1 C A1319 50.036 129.230 79.532 1.00 31.98 O
ATOM 4 OP2 C A1319 47.726 128.155 79.606 1.00 31.11 O
ATOM 5 O5' C A1319 49.509 127.064 78.332 1.00 30.85 O
ATOM 6 C5' C A1319 48.558 126.045 77.950 1.00 30.59 C
ATOM 7 C4' C A1319 48.898 125.478 76.589 1.00 31.47 C
ATOM 8 O4' C A1319 48.060 124.324 76.314 1.00 31.86 O
ATOM 9 C3' C A1319 48.702 126.416 75.408 1.00 29.88 C
ATOM 10 O3' C A1319 49.877 127.217 75.231 1.00 29.79 O
ATOM 11 C2' C A1319 48.432 125.433 74.270 1.00 30.24 C
ATOM 12 O2' C A1319 49.585 124.724 73.877 1.00 29.66 O
ATOM 13 C1' C A1319 47.584 124.379 74.978 1.00 31.17 C
ATOM 14 N1 C A1319 46.148 124.673 75.064 1.00 30.81 N
ATOM 15 C2 C A1319 45.344 124.774 73.919 1.00 29.54 C
ATOM 16 O2 C A1319 45.856 124.706 72.796 1.00 31.25 O
ATOM 17 N3 C A1319 44.022 124.962 74.083 1.00 29.62 N
ATOM 18 C4 C A1319 43.507 125.065 75.316 1.00 30.85 C
ATOM 19 N4 C A1319 42.198 125.215 75.455 1.00 31.90 N
ATOM 20 C5 C A1319 44.307 125.012 76.467 1.00 31.36 C
ATOM 21 C6 C A1319 45.601 124.823 76.301 1.00 31.21 C
ATOM 22 P C A1320 49.735 128.800 75.041 1.00 28.89 P
ATOM 23 OP1 C A1320 51.054 129.434 74.978 1.00 27.75 O
ATOM 24 OP2 C A1320 48.746 129.274 76.042 1.00 29.03 O
ATOM 25 O5' C A1320 49.153 128.911 73.574 1.00 26.94 O
TER
ATOM 1 O3' A B1316 44.018 122.013 80.211 1.00 32.82 O
ATOM 2 P A B1317 45.017 123.264 80.277 1.00 33.88 P
ATOM 3 OP1 A B1317 45.275 123.545 81.695 1.00 32.97 O
ATOM 4 OP2 A B1317 44.504 124.347 79.412 1.00 33.17 O
ATOM 5 O5' A B1317 46.336 122.692 79.601 1.00 32.18 O
ATOM 6 C5' A B1317 47.032 121.598 80.200 1.00 32.41 C
ATOM 7 C4' A B1317 47.650 120.731 79.147 1.00 32.56 C
ATOM 8 O4' A B1317 46.702 120.503 78.102 1.00 34.82 O
ATOM 9 C3' A B1317 48.775 121.386 78.396 1.00 31.83 C
ATOM 10 O3' A B1317 49.904 121.217 79.228 1.00 30.48 O
ATOM 11 C2' A B1317 48.853 120.558 77.108 1.00 33.27 C
ATOM 12 O2' A B1317 49.639 119.399 77.214 1.00 34.22 O
ATOM 13 C1' A B1317 47.401 120.094 76.940 1.00 34.25 C
ATOM 14 N9 A B1317 46.681 120.591 75.764 1.00 34.43 N
ATOM 15 C8 A B1317 45.562 121.384 75.770 1.00 34.57 C
ATOM 16 N7 A B1317 45.108 121.669 74.582 1.00 33.07 N
ATOM 17 C5 A B1317 45.987 121.030 73.726 1.00 33.57 C
ATOM 18 C6 A B1317 46.061 120.967 72.323 1.00 33.30 C
ATOM 19 N6 A B1317 45.198 121.571 71.513 1.00 33.98 N
ATOM 20 N1 A B1317 47.071 120.252 71.775 1.00 33.57 N
ATOM 21 C2 A B1317 47.949 119.647 72.596 1.00 35.02 C
ATOM 22 N3 A B1317 47.984 119.637 73.930 1.00 35.21 N
ATOM 23 C4 A B1317 46.963 120.357 74.439 1.00 34.00 C
ATOM 24 P U B1318 51.125 122.221 79.127 1.00 31.27 P
ATOM 25 OP1 U B1318 51.417 122.275 77.689 1.00 30.42 O
ATOM 26 OP2 U B1318 52.157 121.726 80.082 1.00 31.24 O
ATOM 27 O5' U B1318 50.540 123.628 79.585 1.00 29.79 O
TER
ATOM 2 P C A1319 49.187 128.008 79.566 1.00 29.90 P
ATOM 3 OP1 C A1319 50.036 129.230 79.532 1.00 31.98 O
ATOM 4 OP2 C A1319 47.726 128.155 79.606 1.00 31.11 O
ATOM 5 O5' C A1319 49.509 127.064 78.332 1.00 30.85 O
ATOM 6 C5' C A1319 48.558 126.045 77.950 1.00 30.59 C
ATOM 7 C4' C A1319 48.898 125.478 76.589 1.00 31.47 C
ATOM 8 O4' C A1319 48.060 124.324 76.314 1.00 31.86 O
ATOM 9 C3' C A1319 48.702 126.416 75.408 1.00 29.88 C
ATOM 10 O3' C A1319 49.877 127.217 75.231 1.00 29.79 O
ATOM 11 C2' C A1319 48.432 125.433 74.270 1.00 30.24 C
ATOM 12 O2' C A1319 49.585 124.724 73.877 1.00 29.66 O
ATOM 13 C1' C A1319 47.584 124.379 74.978 1.00 31.17 C
ATOM 14 N1 C A1319 46.148 124.673 75.064 1.00 30.81 N
ATOM 15 C2 C A1319 45.344 124.774 73.919 1.00 29.54 C
ATOM 16 O2 C A1319 45.856 124.706 72.796 1.00 31.25 O
ATOM 17 N3 C A1319 44.022 124.962 74.083 1.00 29.62 N
ATOM 18 C4 C A1319 43.507 125.065 75.316 1.00 30.85 C
ATOM 19 N4 C A1319 42.198 125.215 75.455 1.00 31.90 N
ATOM 20 C5 C A1319 44.307 125.012 76.467 1.00 31.36 C
ATOM 21 C6 C A1319 45.601 124.823 76.301 1.00 31.21 C
ATOM 22 P C A1320 49.735 128.800 75.041 1.00 28.89 P
ATOM 23 OP1 C A1320 51.054 129.434 74.978 1.00 27.75 O
ATOM 24 OP2 C A1320 48.746 129.274 76.042 1.00 29.03 O
ATOM 25 O5' C A1320 49.153 128.911 73.574 1.00 26.94 O
TER
ATOM 1 O3' A B1316 44.018 122.013 80.211 1.00 32.82 O
ATOM 2 P A B1317 45.017 123.264 80.277 1.00 33.88 P
ATOM 3 OP1 A B1317 45.275 123.545 81.695 1.00 32.97 O
ATOM 4 OP2 A B1317 44.504 124.347 79.412 1.00 33.17 O
ATOM 5 O5' A B1317 46.336 122.692 79.601 1.00 32.18 O
ATOM 6 C5' A B1317 47.032 121.598 80.200 1.00 32.41 C
ATOM 7 C4' A B1317 47.650 120.731 79.147 1.00 32.56 C
ATOM 8 O4' A B1317 46.702 120.503 78.102 1.00 34.82 O
ATOM 9 C3' A B1317 48.775 121.386 78.396 1.00 31.83 C
ATOM 10 O3' A B1317 49.904 121.217 79.228 1.00 30.48 O
ATOM 11 C2' A B1317 48.853 120.558 77.108 1.00 33.27 C
ATOM 12 O2' A B1317 49.639 119.399 77.214 1.00 34.22 O
ATOM 13 C1' A B1317 47.401 120.094 76.940 1.00 34.25 C
ATOM 14 N9 A B1317 46.681 120.591 75.764 1.00 34.43 N
ATOM 15 C8 A B1317 45.562 121.384 75.770 1.00 34.57 C
ATOM 16 N7 A B1317 45.108 121.669 74.582 1.00 33.07 N
ATOM 17 C5 A B1317 45.987 121.030 73.726 1.00 33.57 C
ATOM 18 C6 A B1317 46.061 120.967 72.323 1.00 33.30 C
ATOM 19 N6 A B1317 45.198 121.571 71.513 1.00 33.98 N
ATOM 20 N1 A B1317 47.071 120.252 71.775 1.00 33.57 N
ATOM 21 C2 A B1317 47.949 119.647 72.596 1.00 35.02 C
ATOM 22 N3 A B1317 47.984 119.637 73.930 1.00 35.21 N
ATOM 23 C4 A B1317 46.963 120.357 74.439 1.00 34.00 C
ATOM 24 P U B1318 51.125 122.221 79.127 1.00 31.27 P
ATOM 25 OP1 U B1318 51.417 122.275 77.689 1.00 30.42 O
ATOM 26 OP2 U B1318 52.157 121.726 80.082 1.00 31.24 O
ATOM 27 O5' U B1318 50.540 123.628 79.585 1.00 29.79 O
TER
Atoms:
C2: (45.344,124.774,73.919)
OP1: (50.036,129.230,79.532)
OP2: (47.726,128.155,79.606)
C4: (43.507,125.065,75.316)
O5': (49.509,127.064,78.332)
C3': (48.702,126.416,75.408)
C1': (47.584,124.379,74.978)
O4': (48.060,124.324,76.314)
C5': (48.558,126.045,77.950)
P: (49.187,128.008,79.566)
O2: (45.856,124.706,72.796)
C4': (48.898,125.478,76.589)
C2': (48.432,125.433,74.270)
O2': (49.585,124.724,73.877)
N1: (46.148,124.673,75.064)
N3: (44.022,124.962,74.083)
N4: (42.198,125.215,75.455)
C6: (45.601,124.823,76.301)
C5: (44.307,125.012,76.467)
O3': (49.877,127.217,75.231)
OP1: (50.036,129.230,79.532)
OP2: (47.726,128.155,79.606)
C4: (43.507,125.065,75.316)
O5': (49.509,127.064,78.332)
C3': (48.702,126.416,75.408)
C1': (47.584,124.379,74.978)
O4': (48.060,124.324,76.314)
C5': (48.558,126.045,77.950)
P: (49.187,128.008,79.566)
O2: (45.856,124.706,72.796)
C4': (48.898,125.478,76.589)
C2': (48.432,125.433,74.270)
O2': (49.585,124.724,73.877)
N1: (46.148,124.673,75.064)
N3: (44.022,124.962,74.083)
N4: (42.198,125.215,75.455)
C6: (45.601,124.823,76.301)
C5: (44.307,125.012,76.467)
O3': (49.877,127.217,75.231)
OP1: (45.275,123.545,81.695)
OP2: (44.504,124.347,79.412)
C3': (48.775,121.386,78.396)
C1': (47.401,120.094,76.940)
C5': (47.032,121.598,80.200)
O4': (46.702,120.503,78.102)
C8: (45.562,121.384,75.770)
O2': (49.639,119.399,77.214)
C6: (46.061,120.967,72.323)
C5: (45.987,121.030,73.726)
C4: (46.963,120.357,74.439)
P: (45.017,123.264,80.277)
C4': (47.650,120.731,79.147)
C2': (48.853,120.558,77.108)
C2: (47.949,119.647,72.596)
N1: (47.071,120.252,71.775)
N3: (47.984,119.637,73.930)
N6: (45.198,121.571,71.513)
N7: (45.108,121.669,74.582)
N9: (46.681,120.591,75.764)
O5': (46.336,122.692,79.601)
O3': (49.904,121.217,79.228)
OP2: (44.504,124.347,79.412)
C3': (48.775,121.386,78.396)
C1': (47.401,120.094,76.940)
C5': (47.032,121.598,80.200)
O4': (46.702,120.503,78.102)
C8: (45.562,121.384,75.770)
O2': (49.639,119.399,77.214)
C6: (46.061,120.967,72.323)
C5: (45.987,121.030,73.726)
C4: (46.963,120.357,74.439)
P: (45.017,123.264,80.277)
C4': (47.650,120.731,79.147)
C2': (48.853,120.558,77.108)
C2: (47.949,119.647,72.596)
N1: (47.071,120.252,71.775)
N3: (47.984,119.637,73.930)
N6: (45.198,121.571,71.513)
N7: (45.108,121.669,74.582)
N9: (46.681,120.591,75.764)
O5': (46.336,122.692,79.601)
O3': (49.904,121.217,79.228)
Image (generated by PyMOL):