Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ5:0232:0231
Extra
PDB:
ATOM 1 O3' A A 231 93.302 104.208 -1.347 1.00 62.12 O
ATOM 2 P C A 232 94.137 105.263 -2.221 1.00 63.95 P
ATOM 3 OP1 C A 232 95.419 104.609 -2.600 1.00 62.53 O
ATOM 4 OP2 C A 232 94.160 106.560 -1.508 1.00 65.35 O
ATOM 5 O5' C A 232 93.240 105.460 -3.514 1.00 61.72 O
ATOM 6 C5' C A 232 92.828 104.334 -4.294 1.00 62.26 C
ATOM 7 C4' C A 232 91.732 104.746 -5.231 1.00 62.33 C
ATOM 8 O4' C A 232 90.504 104.967 -4.486 1.00 61.53 O
ATOM 9 C3' C A 232 91.999 106.078 -5.900 1.00 62.81 C
ATOM 10 O3' C A 232 92.908 105.968 -6.982 1.00 64.94 O
ATOM 11 C2' C A 232 90.597 106.544 -6.262 1.00 62.71 C
ATOM 12 O2' C A 232 90.069 105.913 -7.413 1.00 62.18 O
ATOM 13 C1' C A 232 89.822 106.097 -5.018 1.00 61.33 C
ATOM 14 N1 C A 232 89.782 107.147 -3.979 1.00 58.96 N
ATOM 15 C2 C A 232 88.757 108.090 -4.018 1.00 57.15 C
ATOM 16 O2 C A 232 87.913 108.020 -4.914 1.00 56.74 O
ATOM 17 N3 C A 232 88.714 109.057 -3.077 1.00 57.82 N
ATOM 18 C4 C A 232 89.645 109.100 -2.120 1.00 57.40 C
ATOM 19 N4 C A 232 89.558 110.071 -1.207 1.00 58.01 N
ATOM 20 C5 C A 232 90.705 108.153 -2.056 1.00 55.89 C
ATOM 21 C6 C A 232 90.735 107.203 -2.994 1.00 58.31 C
ATOM 22 P C A 233 93.783 107.246 -7.408 1.00 64.78 P
ATOM 23 OP1 C A 233 94.531 106.863 -8.634 1.00 66.28 O
ATOM 24 OP2 C A 233 94.529 107.770 -6.235 1.00 64.46 O
ATOM 25 O5' C A 233 92.652 108.287 -7.795 1.00 61.15 O
TER
ATOM 1 O3' A B 230 92.604 107.953 3.458 1.00 53.84 O
ATOM 2 P A B 231 92.802 108.316 1.901 1.00 55.19 P
ATOM 3 OP1 A B 231 94.264 108.583 1.746 1.00 51.01 O
ATOM 4 OP2 A B 231 91.812 109.354 1.481 1.00 50.05 O
ATOM 5 O5' A B 231 92.420 106.959 1.149 1.00 54.13 O
ATOM 6 C5' A B 231 93.098 105.723 1.460 1.00 55.36 C
ATOM 7 C4' A B 231 92.372 104.549 0.842 1.00 57.97 C
ATOM 8 O4' A B 231 91.042 104.420 1.409 1.00 58.22 O
ATOM 9 C3' A B 231 92.132 104.630 -0.654 1.00 59.22 C
ATOM 10 O3' A B 231 93.302 104.208 -1.347 1.00 62.12 O
ATOM 11 C2' A B 231 90.968 103.662 -0.848 1.00 58.09 C
ATOM 12 O2' A B 231 91.382 102.308 -0.892 1.00 58.32 O
ATOM 13 C1' A B 231 90.161 103.891 0.435 1.00 56.32 C
ATOM 14 N9 A B 231 89.038 104.812 0.282 1.00 54.20 N
ATOM 15 C8 A B 231 89.076 106.171 0.097 1.00 55.02 C
ATOM 16 N7 A B 231 87.892 106.721 -0.036 1.00 54.71 N
ATOM 17 C5 A B 231 87.015 105.654 0.075 1.00 53.04 C
ATOM 18 C6 A B 231 85.614 105.573 0.009 1.00 53.08 C
ATOM 19 N6 A B 231 84.819 106.625 -0.209 1.00 53.07 N
ATOM 20 N1 A B 231 85.048 104.357 0.169 1.00 52.84 N
ATOM 21 C2 A B 231 85.846 103.301 0.372 1.00 53.83 C
ATOM 22 N3 A B 231 87.177 103.249 0.443 1.00 53.03 N
ATOM 23 C4 A B 231 87.707 104.473 0.284 1.00 53.75 C
ATOM 24 P C B 232 94.137 105.263 -2.221 1.00 63.95 P
ATOM 25 OP1 C B 232 95.419 104.609 -2.600 1.00 62.53 O
ATOM 26 OP2 C B 232 94.160 106.560 -1.508 1.00 65.35 O
ATOM 27 O5' C B 232 93.240 105.460 -3.514 1.00 61.72 O
TER
ATOM 2 P C A 232 94.137 105.263 -2.221 1.00 63.95 P
ATOM 3 OP1 C A 232 95.419 104.609 -2.600 1.00 62.53 O
ATOM 4 OP2 C A 232 94.160 106.560 -1.508 1.00 65.35 O
ATOM 5 O5' C A 232 93.240 105.460 -3.514 1.00 61.72 O
ATOM 6 C5' C A 232 92.828 104.334 -4.294 1.00 62.26 C
ATOM 7 C4' C A 232 91.732 104.746 -5.231 1.00 62.33 C
ATOM 8 O4' C A 232 90.504 104.967 -4.486 1.00 61.53 O
ATOM 9 C3' C A 232 91.999 106.078 -5.900 1.00 62.81 C
ATOM 10 O3' C A 232 92.908 105.968 -6.982 1.00 64.94 O
ATOM 11 C2' C A 232 90.597 106.544 -6.262 1.00 62.71 C
ATOM 12 O2' C A 232 90.069 105.913 -7.413 1.00 62.18 O
ATOM 13 C1' C A 232 89.822 106.097 -5.018 1.00 61.33 C
ATOM 14 N1 C A 232 89.782 107.147 -3.979 1.00 58.96 N
ATOM 15 C2 C A 232 88.757 108.090 -4.018 1.00 57.15 C
ATOM 16 O2 C A 232 87.913 108.020 -4.914 1.00 56.74 O
ATOM 17 N3 C A 232 88.714 109.057 -3.077 1.00 57.82 N
ATOM 18 C4 C A 232 89.645 109.100 -2.120 1.00 57.40 C
ATOM 19 N4 C A 232 89.558 110.071 -1.207 1.00 58.01 N
ATOM 20 C5 C A 232 90.705 108.153 -2.056 1.00 55.89 C
ATOM 21 C6 C A 232 90.735 107.203 -2.994 1.00 58.31 C
ATOM 22 P C A 233 93.783 107.246 -7.408 1.00 64.78 P
ATOM 23 OP1 C A 233 94.531 106.863 -8.634 1.00 66.28 O
ATOM 24 OP2 C A 233 94.529 107.770 -6.235 1.00 64.46 O
ATOM 25 O5' C A 233 92.652 108.287 -7.795 1.00 61.15 O
TER
ATOM 1 O3' A B 230 92.604 107.953 3.458 1.00 53.84 O
ATOM 2 P A B 231 92.802 108.316 1.901 1.00 55.19 P
ATOM 3 OP1 A B 231 94.264 108.583 1.746 1.00 51.01 O
ATOM 4 OP2 A B 231 91.812 109.354 1.481 1.00 50.05 O
ATOM 5 O5' A B 231 92.420 106.959 1.149 1.00 54.13 O
ATOM 6 C5' A B 231 93.098 105.723 1.460 1.00 55.36 C
ATOM 7 C4' A B 231 92.372 104.549 0.842 1.00 57.97 C
ATOM 8 O4' A B 231 91.042 104.420 1.409 1.00 58.22 O
ATOM 9 C3' A B 231 92.132 104.630 -0.654 1.00 59.22 C
ATOM 10 O3' A B 231 93.302 104.208 -1.347 1.00 62.12 O
ATOM 11 C2' A B 231 90.968 103.662 -0.848 1.00 58.09 C
ATOM 12 O2' A B 231 91.382 102.308 -0.892 1.00 58.32 O
ATOM 13 C1' A B 231 90.161 103.891 0.435 1.00 56.32 C
ATOM 14 N9 A B 231 89.038 104.812 0.282 1.00 54.20 N
ATOM 15 C8 A B 231 89.076 106.171 0.097 1.00 55.02 C
ATOM 16 N7 A B 231 87.892 106.721 -0.036 1.00 54.71 N
ATOM 17 C5 A B 231 87.015 105.654 0.075 1.00 53.04 C
ATOM 18 C6 A B 231 85.614 105.573 0.009 1.00 53.08 C
ATOM 19 N6 A B 231 84.819 106.625 -0.209 1.00 53.07 N
ATOM 20 N1 A B 231 85.048 104.357 0.169 1.00 52.84 N
ATOM 21 C2 A B 231 85.846 103.301 0.372 1.00 53.83 C
ATOM 22 N3 A B 231 87.177 103.249 0.443 1.00 53.03 N
ATOM 23 C4 A B 231 87.707 104.473 0.284 1.00 53.75 C
ATOM 24 P C B 232 94.137 105.263 -2.221 1.00 63.95 P
ATOM 25 OP1 C B 232 95.419 104.609 -2.600 1.00 62.53 O
ATOM 26 OP2 C B 232 94.160 106.560 -1.508 1.00 65.35 O
ATOM 27 O5' C B 232 93.240 105.460 -3.514 1.00 61.72 O
TER
Atoms:
C2: (88.757,108.090,-4.018)
OP1: (95.419,104.609,-2.600)
OP2: (94.160,106.560,-1.508)
C4: (89.645,109.100,-2.120)
O5': (93.240,105.460,-3.514)
C3': (91.999,106.078,-5.900)
C1': (89.822,106.097,-5.018)
O4': (90.504,104.967,-4.486)
C5': (92.828,104.334,-4.294)
P: (94.137,105.263,-2.221)
O2: (87.913,108.020,-4.914)
C4': (91.732,104.746,-5.231)
C2': (90.597,106.544,-6.262)
O2': (90.069,105.913,-7.413)
N1: (89.782,107.147,-3.979)
N3: (88.714,109.057,-3.077)
N4: (89.558,110.071,-1.207)
C6: (90.735,107.203,-2.994)
C5: (90.705,108.153,-2.056)
O3': (92.908,105.968,-6.982)
OP1: (95.419,104.609,-2.600)
OP2: (94.160,106.560,-1.508)
C4: (89.645,109.100,-2.120)
O5': (93.240,105.460,-3.514)
C3': (91.999,106.078,-5.900)
C1': (89.822,106.097,-5.018)
O4': (90.504,104.967,-4.486)
C5': (92.828,104.334,-4.294)
P: (94.137,105.263,-2.221)
O2: (87.913,108.020,-4.914)
C4': (91.732,104.746,-5.231)
C2': (90.597,106.544,-6.262)
O2': (90.069,105.913,-7.413)
N1: (89.782,107.147,-3.979)
N3: (88.714,109.057,-3.077)
N4: (89.558,110.071,-1.207)
C6: (90.735,107.203,-2.994)
C5: (90.705,108.153,-2.056)
O3': (92.908,105.968,-6.982)
OP1: (94.264,108.583,1.746)
OP2: (91.812,109.354,1.481)
C3': (92.132,104.630,-0.654)
C1': (90.161,103.891,0.435)
C5': (93.098,105.723,1.460)
O4': (91.042,104.420,1.409)
C8: (89.076,106.171,0.097)
O2': (91.382,102.308,-0.892)
C6: (85.614,105.573,0.009)
C5: (87.015,105.654,0.075)
C4: (87.707,104.473,0.284)
P: (92.802,108.316,1.901)
C4': (92.372,104.549,0.842)
C2': (90.968,103.662,-0.848)
C2: (85.846,103.301,0.372)
N1: (85.048,104.357,0.169)
N3: (87.177,103.249,0.443)
N6: (84.819,106.625,-0.209)
N7: (87.892,106.721,-0.036)
N9: (89.038,104.812,0.282)
O5': (92.420,106.959,1.149)
O3': (93.302,104.208,-1.347)
OP2: (91.812,109.354,1.481)
C3': (92.132,104.630,-0.654)
C1': (90.161,103.891,0.435)
C5': (93.098,105.723,1.460)
O4': (91.042,104.420,1.409)
C8: (89.076,106.171,0.097)
O2': (91.382,102.308,-0.892)
C6: (85.614,105.573,0.009)
C5: (87.015,105.654,0.075)
C4: (87.707,104.473,0.284)
P: (92.802,108.316,1.901)
C4': (92.372,104.549,0.842)
C2': (90.968,103.662,-0.848)
C2: (85.846,103.301,0.372)
N1: (85.048,104.357,0.169)
N3: (87.177,103.249,0.443)
N6: (84.819,106.625,-0.209)
N7: (87.892,106.721,-0.036)
N9: (89.038,104.812,0.282)
O5': (92.420,106.959,1.149)
O3': (93.302,104.208,-1.347)
Image (generated by PyMOL):