ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2UUB:A542:A541

Extra

PDB:
ATOM 1 O3' A A 541 145.962 102.545 -17.871 1.00 35.67 O
ATOM 2 P C A 542 145.433 101.889 -19.227 1.00 35.41 P
ATOM 3 OP1 C A 542 145.845 100.468 -19.214 1.00 36.24 O
ATOM 4 OP2 C A 542 145.781 102.777 -20.363 1.00 34.90 O
ATOM 5 O5' C A 542 143.878 101.911 -19.013 1.00 37.37 O
ATOM 6 C5' C A 542 142.987 102.414 -20.018 1.00 37.24 C
ATOM 7 C4' C A 542 141.666 102.765 -19.389 1.00 37.08 C
ATOM 8 O4' C A 542 141.122 101.591 -18.732 1.00 36.61 O
ATOM 9 C3' C A 542 141.760 103.802 -18.288 1.00 36.83 C
ATOM 10 O3' C A 542 141.709 105.097 -18.811 1.00 37.20 O
ATOM 11 C2' C A 542 140.552 103.496 -17.423 1.00 37.12 C
ATOM 12 O2' C A 542 139.377 104.088 -17.933 1.00 37.24 O
ATOM 13 C1' C A 542 140.463 101.973 -17.540 1.00 37.29 C
ATOM 14 N1 C A 542 141.067 101.252 -16.403 1.00 38.56 N
ATOM 15 C2 C A 542 140.503 101.405 -15.144 1.00 38.39 C
ATOM 16 O2 C A 542 139.555 102.177 -15.010 1.00 41.98 O
ATOM 17 N3 C A 542 141.008 100.713 -14.100 1.00 39.43 N
ATOM 18 C4 C A 542 142.047 99.901 -14.277 1.00 39.21 C
ATOM 19 N4 C A 542 142.489 99.217 -13.221 1.00 40.90 N
ATOM 20 C5 C A 542 142.671 99.748 -15.545 1.00 39.07 C
ATOM 21 C6 C A 542 142.153 100.435 -16.573 1.00 39.82 C
ATOM 22 P U A 543 142.691 106.217 -18.229 1.00 38.30 P
ATOM 23 OP1 U A 543 142.496 107.441 -19.052 1.00 39.61 O
ATOM 24 OP2 U A 543 144.037 105.628 -18.096 1.00 40.07 O
ATOM 25 O5' U A 543 142.122 106.504 -16.796 1.00 38.77 O
TER

ATOM 1 O3' C B 540 148.562 97.539 -16.152 1.00 36.17 O
ATOM 2 P A B 541 147.401 98.300 -15.331 1.00 37.13 P
ATOM 3 OP1 A B 541 147.716 98.282 -13.860 1.00 33.74 O
ATOM 4 OP2 A B 541 146.109 97.755 -15.826 1.00 33.76 O
ATOM 5 O5' A B 541 147.549 99.794 -15.842 1.00 36.71 O
ATOM 6 C5' A B 541 146.756 100.837 -15.286 1.00 35.82 C
ATOM 7 C4' A B 541 147.155 102.159 -15.876 1.00 35.33 C
ATOM 8 O4' A B 541 148.465 102.531 -15.427 1.00 35.01 O
ATOM 9 C3' A B 541 147.245 102.242 -17.388 1.00 35.01 C
ATOM 10 O3' A B 541 145.962 102.545 -17.871 1.00 35.67 O
ATOM 11 C2' A B 541 148.168 103.441 -17.619 1.00 35.91 C
ATOM 12 O2' A B 541 147.456 104.653 -17.791 1.00 35.27 O
ATOM 13 C1' A B 541 148.981 103.495 -16.318 1.00 37.26 C
ATOM 14 N9 A B 541 150.432 103.327 -16.408 1.00 38.96 N
ATOM 15 C8 A B 541 151.349 103.995 -15.641 1.00 39.74 C
ATOM 16 N7 A B 541 152.588 103.658 -15.884 1.00 42.31 N
ATOM 17 C5 A B 541 152.483 102.702 -16.883 1.00 40.24 C
ATOM 18 C6 A B 541 153.438 101.956 -17.564 1.00 38.21 C
ATOM 19 N6 A B 541 154.740 102.053 -17.333 1.00 37.71 N
ATOM 20 N1 A B 541 153.009 101.095 -18.506 1.00 40.55 N
ATOM 21 C2 A B 541 151.701 101.001 -18.741 1.00 38.93 C
ATOM 22 N3 A B 541 150.703 101.646 -18.165 1.00 41.50 N
ATOM 23 C4 A B 541 151.163 102.494 -17.226 1.00 40.28 C
ATOM 24 P C B 542 145.433 101.889 -19.227 1.00 35.41 P
ATOM 25 OP1 C B 542 145.845 100.468 -19.214 1.00 36.24 O
ATOM 26 OP2 C B 542 145.781 102.777 -20.363 1.00 34.90 O
ATOM 27 O5' C B 542 143.878 101.911 -19.013 1.00 37.37 O
TER

Atoms:
C2: (140.503,101.405,-15.144)
OP1: (145.845,100.468,-19.214)
OP2: (145.781,102.777,-20.363)
C4: (142.047,99.901,-14.277)
O5': (143.878,101.911,-19.013)
C3': (141.760,103.802,-18.288)
C1': (140.463,101.973,-17.540)
O4': (141.122,101.591,-18.732)
C5': (142.987,102.414,-20.018)
P: (145.433,101.889,-19.227)
O2: (139.555,102.177,-15.010)
C4': (141.666,102.765,-19.389)
C2': (140.552,103.496,-17.423)
O2': (139.377,104.088,-17.933)
N1: (141.067,101.252,-16.403)
N3: (141.008,100.713,-14.100)
N4: (142.489,99.217,-13.221)
C6: (142.153,100.435,-16.573)
C5: (142.671,99.748,-15.545)
O3': (141.709,105.097,-18.811)
OP1: (147.716,98.282,-13.860)
OP2: (146.109,97.755,-15.826)
C3': (147.245,102.242,-17.388)
C1': (148.981,103.495,-16.318)
C5': (146.756,100.837,-15.286)
O4': (148.465,102.531,-15.427)
C8: (151.349,103.995,-15.641)
O2': (147.456,104.653,-17.791)
C6: (153.438,101.956,-17.564)
C5: (152.483,102.702,-16.883)
C4: (151.163,102.494,-17.226)
P: (147.401,98.300,-15.331)
C4': (147.155,102.159,-15.876)
C2': (148.168,103.441,-17.619)
C2: (151.701,101.001,-18.741)
N1: (153.009,101.095,-18.506)
N3: (150.703,101.646,-18.165)
N6: (154.740,102.053,-17.333)
N7: (152.588,103.658,-15.884)
N9: (150.432,103.327,-16.408)
O5': (147.549,99.794,-15.842)
O3': (145.962,102.545,-17.871)
Image (generated by PyMOL):
PyMOL image
show in jmol