Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2VQF:A542:A541
Extra
PDB:
ATOM 1 O3' A A 541 147.508 103.272 -16.907 1.00 55.16 O
ATOM 2 P C A 542 147.058 102.788 -18.353 1.00 57.72 P
ATOM 3 OP1 C A 542 147.586 101.412 -18.517 1.00 58.61 O
ATOM 4 OP2 C A 542 147.415 103.887 -19.319 1.00 60.39 O
ATOM 5 O5' C A 542 145.478 102.693 -18.195 1.00 57.72 O
ATOM 6 C5' C A 542 144.587 103.186 -19.215 1.00 57.34 C
ATOM 7 C4' C A 542 143.300 103.654 -18.585 1.00 57.46 C
ATOM 8 O4' C A 542 142.644 102.540 -17.935 1.00 58.10 O
ATOM 9 C3' C A 542 143.469 104.702 -17.499 1.00 57.44 C
ATOM 10 O3' C A 542 143.440 105.983 -18.077 1.00 57.49 O
ATOM 11 C2' C A 542 142.242 104.492 -16.629 1.00 58.10 C
ATOM 12 O2' C A 542 141.126 105.168 -17.150 1.00 59.45 O
ATOM 13 C1' C A 542 142.008 102.985 -16.752 1.00 59.30 C
ATOM 14 N1 C A 542 142.537 102.228 -15.605 1.00 62.12 N
ATOM 15 C2 C A 542 141.954 102.417 -14.348 1.00 64.65 C
ATOM 16 O2 C A 542 140.993 103.190 -14.238 1.00 68.44 O
ATOM 17 N3 C A 542 142.449 101.755 -13.282 1.00 65.08 N
ATOM 18 C4 C A 542 143.475 100.927 -13.432 1.00 64.83 C
ATOM 19 N4 C A 542 143.929 100.300 -12.347 1.00 66.32 N
ATOM 20 C5 C A 542 144.082 100.704 -14.701 1.00 65.20 C
ATOM 21 C6 C A 542 143.586 101.366 -15.750 1.00 62.86 C
ATOM 22 P U A 543 144.311 107.173 -17.447 1.00 58.81 P
ATOM 23 OP1 U A 543 143.940 108.366 -18.247 1.00 59.96 O
ATOM 24 OP2 U A 543 145.739 106.786 -17.331 1.00 60.84 O
ATOM 25 O5' U A 543 143.709 107.369 -16.003 1.00 61.39 O
TER
ATOM 1 O3' C B 540 149.952 98.432 -15.223 1.00 55.85 O
ATOM 2 P A B 541 148.775 99.180 -14.402 1.00 54.53 P
ATOM 3 OP1 A B 541 149.147 99.271 -12.942 1.00 52.11 O
ATOM 4 OP2 A B 541 147.485 98.575 -14.782 1.00 50.49 O
ATOM 5 O5' A B 541 148.857 100.653 -14.995 1.00 53.53 O
ATOM 6 C5' A B 541 148.296 101.769 -14.291 1.00 53.67 C
ATOM 7 C4' A B 541 148.693 103.061 -14.954 1.00 53.11 C
ATOM 8 O4' A B 541 149.990 103.488 -14.524 1.00 54.13 O
ATOM 9 C3' A B 541 148.790 103.030 -16.461 1.00 53.34 C
ATOM 10 O3' A B 541 147.508 103.272 -16.907 1.00 55.16 O
ATOM 11 C2' A B 541 149.717 104.203 -16.788 1.00 54.48 C
ATOM 12 O2' A B 541 149.005 105.377 -17.159 1.00 55.39 O
ATOM 13 C1' A B 541 150.513 104.378 -15.481 1.00 54.46 C
ATOM 14 N9 A B 541 151.971 104.224 -15.494 1.00 54.82 N
ATOM 15 C8 A B 541 152.840 104.925 -14.693 1.00 57.16 C
ATOM 16 N7 A B 541 154.101 104.626 -14.883 1.00 57.67 N
ATOM 17 C5 A B 541 154.062 103.661 -15.877 1.00 57.54 C
ATOM 18 C6 A B 541 155.068 102.955 -16.526 1.00 57.63 C
ATOM 19 N6 A B 541 156.366 103.138 -16.282 1.00 58.59 N
ATOM 20 N1 A B 541 154.699 102.050 -17.455 1.00 57.66 N
ATOM 21 C2 A B 541 153.402 101.890 -17.714 1.00 55.01 C
ATOM 22 N3 A B 541 152.362 102.505 -17.184 1.00 56.34 N
ATOM 23 C4 A B 541 152.759 103.393 -16.256 1.00 57.03 C
ATOM 24 P C B 542 147.058 102.788 -18.353 1.00 57.72 P
ATOM 25 OP1 C B 542 147.586 101.412 -18.517 1.00 58.61 O
ATOM 26 OP2 C B 542 147.415 103.887 -19.319 1.00 60.39 O
ATOM 27 O5' C B 542 145.478 102.693 -18.195 1.00 57.72 O
TER
ATOM 2 P C A 542 147.058 102.788 -18.353 1.00 57.72 P
ATOM 3 OP1 C A 542 147.586 101.412 -18.517 1.00 58.61 O
ATOM 4 OP2 C A 542 147.415 103.887 -19.319 1.00 60.39 O
ATOM 5 O5' C A 542 145.478 102.693 -18.195 1.00 57.72 O
ATOM 6 C5' C A 542 144.587 103.186 -19.215 1.00 57.34 C
ATOM 7 C4' C A 542 143.300 103.654 -18.585 1.00 57.46 C
ATOM 8 O4' C A 542 142.644 102.540 -17.935 1.00 58.10 O
ATOM 9 C3' C A 542 143.469 104.702 -17.499 1.00 57.44 C
ATOM 10 O3' C A 542 143.440 105.983 -18.077 1.00 57.49 O
ATOM 11 C2' C A 542 142.242 104.492 -16.629 1.00 58.10 C
ATOM 12 O2' C A 542 141.126 105.168 -17.150 1.00 59.45 O
ATOM 13 C1' C A 542 142.008 102.985 -16.752 1.00 59.30 C
ATOM 14 N1 C A 542 142.537 102.228 -15.605 1.00 62.12 N
ATOM 15 C2 C A 542 141.954 102.417 -14.348 1.00 64.65 C
ATOM 16 O2 C A 542 140.993 103.190 -14.238 1.00 68.44 O
ATOM 17 N3 C A 542 142.449 101.755 -13.282 1.00 65.08 N
ATOM 18 C4 C A 542 143.475 100.927 -13.432 1.00 64.83 C
ATOM 19 N4 C A 542 143.929 100.300 -12.347 1.00 66.32 N
ATOM 20 C5 C A 542 144.082 100.704 -14.701 1.00 65.20 C
ATOM 21 C6 C A 542 143.586 101.366 -15.750 1.00 62.86 C
ATOM 22 P U A 543 144.311 107.173 -17.447 1.00 58.81 P
ATOM 23 OP1 U A 543 143.940 108.366 -18.247 1.00 59.96 O
ATOM 24 OP2 U A 543 145.739 106.786 -17.331 1.00 60.84 O
ATOM 25 O5' U A 543 143.709 107.369 -16.003 1.00 61.39 O
TER
ATOM 1 O3' C B 540 149.952 98.432 -15.223 1.00 55.85 O
ATOM 2 P A B 541 148.775 99.180 -14.402 1.00 54.53 P
ATOM 3 OP1 A B 541 149.147 99.271 -12.942 1.00 52.11 O
ATOM 4 OP2 A B 541 147.485 98.575 -14.782 1.00 50.49 O
ATOM 5 O5' A B 541 148.857 100.653 -14.995 1.00 53.53 O
ATOM 6 C5' A B 541 148.296 101.769 -14.291 1.00 53.67 C
ATOM 7 C4' A B 541 148.693 103.061 -14.954 1.00 53.11 C
ATOM 8 O4' A B 541 149.990 103.488 -14.524 1.00 54.13 O
ATOM 9 C3' A B 541 148.790 103.030 -16.461 1.00 53.34 C
ATOM 10 O3' A B 541 147.508 103.272 -16.907 1.00 55.16 O
ATOM 11 C2' A B 541 149.717 104.203 -16.788 1.00 54.48 C
ATOM 12 O2' A B 541 149.005 105.377 -17.159 1.00 55.39 O
ATOM 13 C1' A B 541 150.513 104.378 -15.481 1.00 54.46 C
ATOM 14 N9 A B 541 151.971 104.224 -15.494 1.00 54.82 N
ATOM 15 C8 A B 541 152.840 104.925 -14.693 1.00 57.16 C
ATOM 16 N7 A B 541 154.101 104.626 -14.883 1.00 57.67 N
ATOM 17 C5 A B 541 154.062 103.661 -15.877 1.00 57.54 C
ATOM 18 C6 A B 541 155.068 102.955 -16.526 1.00 57.63 C
ATOM 19 N6 A B 541 156.366 103.138 -16.282 1.00 58.59 N
ATOM 20 N1 A B 541 154.699 102.050 -17.455 1.00 57.66 N
ATOM 21 C2 A B 541 153.402 101.890 -17.714 1.00 55.01 C
ATOM 22 N3 A B 541 152.362 102.505 -17.184 1.00 56.34 N
ATOM 23 C4 A B 541 152.759 103.393 -16.256 1.00 57.03 C
ATOM 24 P C B 542 147.058 102.788 -18.353 1.00 57.72 P
ATOM 25 OP1 C B 542 147.586 101.412 -18.517 1.00 58.61 O
ATOM 26 OP2 C B 542 147.415 103.887 -19.319 1.00 60.39 O
ATOM 27 O5' C B 542 145.478 102.693 -18.195 1.00 57.72 O
TER
Atoms:
C2: (141.954,102.417,-14.348)
OP1: (147.586,101.412,-18.517)
OP2: (147.415,103.887,-19.319)
C4: (143.475,100.927,-13.432)
O5': (145.478,102.693,-18.195)
C3': (143.469,104.702,-17.499)
C1': (142.008,102.985,-16.752)
O4': (142.644,102.540,-17.935)
C5': (144.587,103.186,-19.215)
P: (147.058,102.788,-18.353)
O2: (140.993,103.190,-14.238)
C4': (143.300,103.654,-18.585)
C2': (142.242,104.492,-16.629)
O2': (141.126,105.168,-17.150)
N1: (142.537,102.228,-15.605)
N3: (142.449,101.755,-13.282)
N4: (143.929,100.300,-12.347)
C6: (143.586,101.366,-15.750)
C5: (144.082,100.704,-14.701)
O3': (143.440,105.983,-18.077)
OP1: (147.586,101.412,-18.517)
OP2: (147.415,103.887,-19.319)
C4: (143.475,100.927,-13.432)
O5': (145.478,102.693,-18.195)
C3': (143.469,104.702,-17.499)
C1': (142.008,102.985,-16.752)
O4': (142.644,102.540,-17.935)
C5': (144.587,103.186,-19.215)
P: (147.058,102.788,-18.353)
O2: (140.993,103.190,-14.238)
C4': (143.300,103.654,-18.585)
C2': (142.242,104.492,-16.629)
O2': (141.126,105.168,-17.150)
N1: (142.537,102.228,-15.605)
N3: (142.449,101.755,-13.282)
N4: (143.929,100.300,-12.347)
C6: (143.586,101.366,-15.750)
C5: (144.082,100.704,-14.701)
O3': (143.440,105.983,-18.077)
OP1: (149.147,99.271,-12.942)
OP2: (147.485,98.575,-14.782)
C3': (148.790,103.030,-16.461)
C1': (150.513,104.378,-15.481)
C5': (148.296,101.769,-14.291)
O4': (149.990,103.488,-14.524)
C8: (152.840,104.925,-14.693)
O2': (149.005,105.377,-17.159)
C6: (155.068,102.955,-16.526)
C5: (154.062,103.661,-15.877)
C4: (152.759,103.393,-16.256)
P: (148.775,99.180,-14.402)
C4': (148.693,103.061,-14.954)
C2': (149.717,104.203,-16.788)
C2: (153.402,101.890,-17.714)
N1: (154.699,102.050,-17.455)
N3: (152.362,102.505,-17.184)
N6: (156.366,103.138,-16.282)
N7: (154.101,104.626,-14.883)
N9: (151.971,104.224,-15.494)
O5': (148.857,100.653,-14.995)
O3': (147.508,103.272,-16.907)
OP2: (147.485,98.575,-14.782)
C3': (148.790,103.030,-16.461)
C1': (150.513,104.378,-15.481)
C5': (148.296,101.769,-14.291)
O4': (149.990,103.488,-14.524)
C8: (152.840,104.925,-14.693)
O2': (149.005,105.377,-17.159)
C6: (155.068,102.955,-16.526)
C5: (154.062,103.661,-15.877)
C4: (152.759,103.393,-16.256)
P: (148.775,99.180,-14.402)
C4': (148.693,103.061,-14.954)
C2': (149.717,104.203,-16.788)
C2: (153.402,101.890,-17.714)
N1: (154.699,102.050,-17.455)
N3: (152.362,102.505,-17.184)
N6: (156.366,103.138,-16.282)
N7: (154.101,104.626,-14.883)
N9: (151.971,104.224,-15.494)
O5': (148.857,100.653,-14.995)
O3': (147.508,103.272,-16.907)
Image (generated by PyMOL):