Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02521:02607
Extra
PDB:
ATOM 1 O3' A A2520 52.802 143.358 141.339 1.00 50.19 O
ATOM 2 P C A2521 52.392 142.862 142.824 1.00 50.06 P
ATOM 3 OP1 C A2521 51.130 142.063 142.756 1.00 48.17 O
ATOM 4 OP2 C A2521 52.455 144.041 143.718 1.00 50.46 O
ATOM 5 O5' C A2521 53.607 141.915 143.253 1.00 48.07 O
ATOM 6 C5' C A2521 53.615 140.526 142.905 1.00 46.55 C
ATOM 7 C4' C A2521 54.827 140.181 142.053 1.00 48.83 C
ATOM 8 O4' C A2521 55.368 141.350 141.372 1.00 48.14 O
ATOM 9 C3' C A2521 56.075 139.651 142.736 1.00 47.27 C
ATOM 10 O3' C A2521 55.915 138.303 143.150 1.00 49.01 O
ATOM 11 C2' C A2521 57.070 139.728 141.588 1.00 46.10 C
ATOM 12 O2' C A2521 56.797 138.744 140.615 1.00 44.57 O
ATOM 13 C1' C A2521 56.706 141.074 140.977 1.00 45.96 C
ATOM 14 N1 C A2521 57.600 142.133 141.470 1.00 48.44 N
ATOM 15 C2 C A2521 58.921 142.194 140.956 1.00 50.87 C
ATOM 16 O2 C A2521 59.294 141.335 140.137 1.00 50.66 O
ATOM 17 N3 C A2521 59.752 143.180 141.377 1.00 50.18 N
ATOM 18 C4 C A2521 59.325 144.069 142.279 1.00 50.25 C
ATOM 19 N4 C A2521 60.176 145.029 142.654 1.00 51.01 N
ATOM 20 C5 C A2521 58.003 144.016 142.834 1.00 49.46 C
ATOM 21 C6 C A2521 57.182 143.045 142.402 1.00 48.08 C
ATOM 22 P G A2522 56.808 137.737 144.358 1.00 49.22 P
ATOM 23 OP1 G A2522 56.067 136.580 144.931 1.00 46.98 O
ATOM 24 OP2 G A2522 57.196 138.880 145.228 1.00 47.54 O
ATOM 25 O5' G A2522 58.143 137.208 143.665 1.00 48.18 O
TER
ATOM 1 O3' C B2606 54.482 146.421 145.494 1.00 72.22 O
ATOM 2 P A B2607 55.451 145.503 146.385 1.00 76.18 P
ATOM 3 OP1 A B2607 55.553 146.128 147.723 1.00 76.11 O
ATOM 4 OP2 A B2607 56.688 145.214 145.620 1.00 77.45 O
ATOM 5 O5' A B2607 54.606 144.157 146.471 1.00 82.09 O
ATOM 6 C5' A B2607 54.907 143.132 147.417 1.00 89.34 C
ATOM 7 C4' A B2607 54.445 143.546 148.790 1.00 95.36 C
ATOM 8 O4' A B2607 53.268 144.393 148.712 1.00 94.61 O
ATOM 9 C3' A B2607 54.023 142.411 149.697 1.00 99.62 C
ATOM 10 O3' A B2607 55.148 141.735 150.254 1.00107.53 O
ATOM 11 C2' A B2607 53.161 143.128 150.734 1.00 97.80 C
ATOM 12 O2' A B2607 53.917 143.752 151.760 1.00 97.74 O
ATOM 13 C1' A B2607 52.473 144.194 149.872 1.00 95.00 C
ATOM 14 N9 A B2607 51.103 143.885 149.452 1.00 92.28 N
ATOM 15 C8 A B2607 49.946 144.403 149.985 1.00 91.19 C
ATOM 16 N7 A B2607 48.857 144.005 149.374 1.00 89.59 N
ATOM 17 C5 A B2607 49.324 143.159 148.380 1.00 88.08 C
ATOM 18 C6 A B2607 48.667 142.436 147.381 1.00 87.49 C
ATOM 19 N6 A B2607 47.345 142.469 147.195 1.00 87.07 N
ATOM 20 N1 A B2607 49.421 141.677 146.558 1.00 87.31 N
ATOM 21 C2 A B2607 50.748 141.666 146.733 1.00 86.76 C
ATOM 22 N3 A B2607 51.484 142.316 147.627 1.00 86.81 N
ATOM 23 C4 A B2607 50.703 143.056 148.430 1.00 89.01 C
ATOM 24 P C B2608 54.983 140.222 150.774 1.00113.72 P
ATOM 25 OP1 C B2608 56.257 139.846 151.454 1.00114.26 O
ATOM 26 OP2 C B2608 54.465 139.375 149.655 1.00113.27 O
ATOM 27 O5' C B2608 53.849 140.353 151.887 1.00113.25 O
TER
ATOM 2 P C A2521 52.392 142.862 142.824 1.00 50.06 P
ATOM 3 OP1 C A2521 51.130 142.063 142.756 1.00 48.17 O
ATOM 4 OP2 C A2521 52.455 144.041 143.718 1.00 50.46 O
ATOM 5 O5' C A2521 53.607 141.915 143.253 1.00 48.07 O
ATOM 6 C5' C A2521 53.615 140.526 142.905 1.00 46.55 C
ATOM 7 C4' C A2521 54.827 140.181 142.053 1.00 48.83 C
ATOM 8 O4' C A2521 55.368 141.350 141.372 1.00 48.14 O
ATOM 9 C3' C A2521 56.075 139.651 142.736 1.00 47.27 C
ATOM 10 O3' C A2521 55.915 138.303 143.150 1.00 49.01 O
ATOM 11 C2' C A2521 57.070 139.728 141.588 1.00 46.10 C
ATOM 12 O2' C A2521 56.797 138.744 140.615 1.00 44.57 O
ATOM 13 C1' C A2521 56.706 141.074 140.977 1.00 45.96 C
ATOM 14 N1 C A2521 57.600 142.133 141.470 1.00 48.44 N
ATOM 15 C2 C A2521 58.921 142.194 140.956 1.00 50.87 C
ATOM 16 O2 C A2521 59.294 141.335 140.137 1.00 50.66 O
ATOM 17 N3 C A2521 59.752 143.180 141.377 1.00 50.18 N
ATOM 18 C4 C A2521 59.325 144.069 142.279 1.00 50.25 C
ATOM 19 N4 C A2521 60.176 145.029 142.654 1.00 51.01 N
ATOM 20 C5 C A2521 58.003 144.016 142.834 1.00 49.46 C
ATOM 21 C6 C A2521 57.182 143.045 142.402 1.00 48.08 C
ATOM 22 P G A2522 56.808 137.737 144.358 1.00 49.22 P
ATOM 23 OP1 G A2522 56.067 136.580 144.931 1.00 46.98 O
ATOM 24 OP2 G A2522 57.196 138.880 145.228 1.00 47.54 O
ATOM 25 O5' G A2522 58.143 137.208 143.665 1.00 48.18 O
TER
ATOM 1 O3' C B2606 54.482 146.421 145.494 1.00 72.22 O
ATOM 2 P A B2607 55.451 145.503 146.385 1.00 76.18 P
ATOM 3 OP1 A B2607 55.553 146.128 147.723 1.00 76.11 O
ATOM 4 OP2 A B2607 56.688 145.214 145.620 1.00 77.45 O
ATOM 5 O5' A B2607 54.606 144.157 146.471 1.00 82.09 O
ATOM 6 C5' A B2607 54.907 143.132 147.417 1.00 89.34 C
ATOM 7 C4' A B2607 54.445 143.546 148.790 1.00 95.36 C
ATOM 8 O4' A B2607 53.268 144.393 148.712 1.00 94.61 O
ATOM 9 C3' A B2607 54.023 142.411 149.697 1.00 99.62 C
ATOM 10 O3' A B2607 55.148 141.735 150.254 1.00107.53 O
ATOM 11 C2' A B2607 53.161 143.128 150.734 1.00 97.80 C
ATOM 12 O2' A B2607 53.917 143.752 151.760 1.00 97.74 O
ATOM 13 C1' A B2607 52.473 144.194 149.872 1.00 95.00 C
ATOM 14 N9 A B2607 51.103 143.885 149.452 1.00 92.28 N
ATOM 15 C8 A B2607 49.946 144.403 149.985 1.00 91.19 C
ATOM 16 N7 A B2607 48.857 144.005 149.374 1.00 89.59 N
ATOM 17 C5 A B2607 49.324 143.159 148.380 1.00 88.08 C
ATOM 18 C6 A B2607 48.667 142.436 147.381 1.00 87.49 C
ATOM 19 N6 A B2607 47.345 142.469 147.195 1.00 87.07 N
ATOM 20 N1 A B2607 49.421 141.677 146.558 1.00 87.31 N
ATOM 21 C2 A B2607 50.748 141.666 146.733 1.00 86.76 C
ATOM 22 N3 A B2607 51.484 142.316 147.627 1.00 86.81 N
ATOM 23 C4 A B2607 50.703 143.056 148.430 1.00 89.01 C
ATOM 24 P C B2608 54.983 140.222 150.774 1.00113.72 P
ATOM 25 OP1 C B2608 56.257 139.846 151.454 1.00114.26 O
ATOM 26 OP2 C B2608 54.465 139.375 149.655 1.00113.27 O
ATOM 27 O5' C B2608 53.849 140.353 151.887 1.00113.25 O
TER
Atoms:
C2: (58.921,142.194,140.956)
OP1: (51.130,142.063,142.756)
OP2: (52.455,144.041,143.718)
C4: (59.325,144.069,142.279)
O5': (53.607,141.915,143.253)
C3': (56.075,139.651,142.736)
C1': (56.706,141.074,140.977)
O4': (55.368,141.350,141.372)
C5': (53.615,140.526,142.905)
P: (52.392,142.862,142.824)
O2: (59.294,141.335,140.137)
C4': (54.827,140.181,142.053)
C2': (57.070,139.728,141.588)
O2': (56.797,138.744,140.615)
N1: (57.600,142.133,141.470)
N3: (59.752,143.180,141.377)
N4: (60.176,145.029,142.654)
C6: (57.182,143.045,142.402)
C5: (58.003,144.016,142.834)
O3': (55.915,138.303,143.150)
OP1: (51.130,142.063,142.756)
OP2: (52.455,144.041,143.718)
C4: (59.325,144.069,142.279)
O5': (53.607,141.915,143.253)
C3': (56.075,139.651,142.736)
C1': (56.706,141.074,140.977)
O4': (55.368,141.350,141.372)
C5': (53.615,140.526,142.905)
P: (52.392,142.862,142.824)
O2: (59.294,141.335,140.137)
C4': (54.827,140.181,142.053)
C2': (57.070,139.728,141.588)
O2': (56.797,138.744,140.615)
N1: (57.600,142.133,141.470)
N3: (59.752,143.180,141.377)
N4: (60.176,145.029,142.654)
C6: (57.182,143.045,142.402)
C5: (58.003,144.016,142.834)
O3': (55.915,138.303,143.150)
OP1: (55.553,146.128,147.723)
OP2: (56.688,145.214,145.620)
C3': (54.023,142.411,149.697)
C1': (52.473,144.194,149.872)
C5': (54.907,143.132,147.417)
O4': (53.268,144.393,148.712)
C8: (49.946,144.403,149.985)
O2': (53.917,143.752,151.760)
C6: (48.667,142.436,147.381)
C5: (49.324,143.159,148.380)
C4: (50.703,143.056,148.430)
P: (55.451,145.503,146.385)
C4': (54.445,143.546,148.790)
C2': (53.161,143.128,150.734)
C2: (50.748,141.666,146.733)
N1: (49.421,141.677,146.558)
N3: (51.484,142.316,147.627)
N6: (47.345,142.469,147.195)
N7: (48.857,144.005,149.374)
N9: (51.103,143.885,149.452)
O5': (54.606,144.157,146.471)
O3': (55.148,141.735,150.254)
OP2: (56.688,145.214,145.620)
C3': (54.023,142.411,149.697)
C1': (52.473,144.194,149.872)
C5': (54.907,143.132,147.417)
O4': (53.268,144.393,148.712)
C8: (49.946,144.403,149.985)
O2': (53.917,143.752,151.760)
C6: (48.667,142.436,147.381)
C5: (49.324,143.159,148.380)
C4: (50.703,143.056,148.430)
P: (55.451,145.503,146.385)
C4': (54.445,143.546,148.790)
C2': (53.161,143.128,150.734)
C2: (50.748,141.666,146.733)
N1: (49.421,141.677,146.558)
N3: (51.484,142.316,147.627)
N6: (47.345,142.469,147.195)
N7: (48.857,144.005,149.374)
N9: (51.103,143.885,149.452)
O5': (54.606,144.157,146.471)
O3': (55.148,141.735,150.254)
Image (generated by PyMOL):