Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02187:02186
Extra
PDB:
ATOM 1 O3' A A2186 96.204 42.818 104.689 1.00 99.81 O
ATOM 2 P C A2187 94.893 41.924 104.432 1.00 95.69 P
ATOM 3 OP1 C A2187 94.358 42.324 103.107 1.00 96.86 O
ATOM 4 OP2 C A2187 94.020 42.014 105.629 1.00 96.77 O
ATOM 5 O5' C A2187 95.438 40.436 104.301 1.00 92.19 O
ATOM 6 C5' C A2187 95.988 39.948 103.066 1.00 87.22 C
ATOM 7 C4' C A2187 96.485 38.537 103.251 1.00 84.67 C
ATOM 8 O4' C A2187 97.452 38.535 104.336 1.00 84.64 O
ATOM 9 C3' C A2187 95.430 37.536 103.694 1.00 83.22 C
ATOM 10 O3' C A2187 94.701 37.004 102.596 1.00 81.82 O
ATOM 11 C2' C A2187 96.265 36.491 104.416 1.00 83.28 C
ATOM 12 O2' C A2187 96.963 35.641 103.527 1.00 82.47 O
ATOM 13 C1' C A2187 97.267 37.384 105.148 1.00 83.51 C
ATOM 14 N1 C A2187 96.784 37.822 106.478 1.00 83.40 N
ATOM 15 C2 C A2187 96.848 36.922 107.558 1.00 82.94 C
ATOM 16 O2 C A2187 97.322 35.788 107.375 1.00 82.50 O
ATOM 17 N3 C A2187 96.392 37.315 108.773 1.00 82.65 N
ATOM 18 C4 C A2187 95.897 38.546 108.935 1.00 82.89 C
ATOM 19 N4 C A2187 95.459 38.893 110.149 1.00 82.14 N
ATOM 20 C5 C A2187 95.829 39.480 107.859 1.00 82.76 C
ATOM 21 C6 C A2187 96.277 39.081 106.663 1.00 82.65 C
ATOM 22 P C A2188 93.278 36.295 102.847 1.00 80.44 P
ATOM 23 OP1 C A2188 92.792 35.781 101.534 1.00 79.20 O
ATOM 24 OP2 C A2188 92.423 37.217 103.642 1.00 79.39 O
ATOM 25 O5' C A2188 93.628 35.039 103.759 1.00 78.50 O
TER
ATOM 1 P A B2186 95.222 42.917 109.755 1.00108.51 P
ATOM 2 OP1 A B2186 94.131 42.185 109.066 1.00108.92 O
ATOM 3 OP2 A B2186 95.816 42.345 110.989 1.00108.28 O
ATOM 4 O5' A B2186 96.397 43.142 108.703 1.00107.52 O
ATOM 5 C5' A B2186 96.293 44.127 107.656 1.00105.09 C
ATOM 6 C4' A B2186 97.302 43.831 106.575 1.00104.38 C
ATOM 7 O4' A B2186 98.598 43.639 107.198 1.00105.84 O
ATOM 8 C3' A B2186 97.065 42.545 105.798 1.00103.69 C
ATOM 9 O3' A B2186 96.204 42.818 104.689 1.00 99.81 O
ATOM 10 C2' A B2186 98.467 42.188 105.306 1.00106.09 C
ATOM 11 O2' A B2186 98.836 42.871 104.124 1.00107.79 O
ATOM 12 C1' A B2186 99.348 42.701 106.449 1.00107.65 C
ATOM 13 N9 A B2186 99.891 41.687 107.355 1.00110.84 N
ATOM 14 C8 A B2186 99.218 40.889 108.251 1.00112.26 C
ATOM 15 N7 A B2186 99.998 40.075 108.925 1.00113.18 N
ATOM 16 C5 A B2186 101.271 40.353 108.441 1.00113.15 C
ATOM 17 C6 A B2186 102.542 39.824 108.752 1.00113.34 C
ATOM 18 N6 A B2186 102.748 38.867 109.662 1.00112.69 N
ATOM 19 N1 A B2186 103.607 40.322 108.085 1.00113.54 N
ATOM 20 C2 A B2186 103.402 41.285 107.174 1.00113.33 C
ATOM 21 N3 A B2186 102.262 41.862 106.796 1.00112.83 N
ATOM 22 C4 A B2186 101.220 41.345 107.474 1.00112.59 C
ATOM 23 P C B2187 94.893 41.924 104.432 1.00 95.69 P
ATOM 24 OP1 C B2187 94.358 42.324 103.107 1.00 96.86 O
ATOM 25 OP2 C B2187 94.020 42.014 105.629 1.00 96.77 O
ATOM 26 O5' C B2187 95.438 40.436 104.301 1.00 92.19 O
TER
ATOM 2 P C A2187 94.893 41.924 104.432 1.00 95.69 P
ATOM 3 OP1 C A2187 94.358 42.324 103.107 1.00 96.86 O
ATOM 4 OP2 C A2187 94.020 42.014 105.629 1.00 96.77 O
ATOM 5 O5' C A2187 95.438 40.436 104.301 1.00 92.19 O
ATOM 6 C5' C A2187 95.988 39.948 103.066 1.00 87.22 C
ATOM 7 C4' C A2187 96.485 38.537 103.251 1.00 84.67 C
ATOM 8 O4' C A2187 97.452 38.535 104.336 1.00 84.64 O
ATOM 9 C3' C A2187 95.430 37.536 103.694 1.00 83.22 C
ATOM 10 O3' C A2187 94.701 37.004 102.596 1.00 81.82 O
ATOM 11 C2' C A2187 96.265 36.491 104.416 1.00 83.28 C
ATOM 12 O2' C A2187 96.963 35.641 103.527 1.00 82.47 O
ATOM 13 C1' C A2187 97.267 37.384 105.148 1.00 83.51 C
ATOM 14 N1 C A2187 96.784 37.822 106.478 1.00 83.40 N
ATOM 15 C2 C A2187 96.848 36.922 107.558 1.00 82.94 C
ATOM 16 O2 C A2187 97.322 35.788 107.375 1.00 82.50 O
ATOM 17 N3 C A2187 96.392 37.315 108.773 1.00 82.65 N
ATOM 18 C4 C A2187 95.897 38.546 108.935 1.00 82.89 C
ATOM 19 N4 C A2187 95.459 38.893 110.149 1.00 82.14 N
ATOM 20 C5 C A2187 95.829 39.480 107.859 1.00 82.76 C
ATOM 21 C6 C A2187 96.277 39.081 106.663 1.00 82.65 C
ATOM 22 P C A2188 93.278 36.295 102.847 1.00 80.44 P
ATOM 23 OP1 C A2188 92.792 35.781 101.534 1.00 79.20 O
ATOM 24 OP2 C A2188 92.423 37.217 103.642 1.00 79.39 O
ATOM 25 O5' C A2188 93.628 35.039 103.759 1.00 78.50 O
TER
ATOM 1 P A B2186 95.222 42.917 109.755 1.00108.51 P
ATOM 2 OP1 A B2186 94.131 42.185 109.066 1.00108.92 O
ATOM 3 OP2 A B2186 95.816 42.345 110.989 1.00108.28 O
ATOM 4 O5' A B2186 96.397 43.142 108.703 1.00107.52 O
ATOM 5 C5' A B2186 96.293 44.127 107.656 1.00105.09 C
ATOM 6 C4' A B2186 97.302 43.831 106.575 1.00104.38 C
ATOM 7 O4' A B2186 98.598 43.639 107.198 1.00105.84 O
ATOM 8 C3' A B2186 97.065 42.545 105.798 1.00103.69 C
ATOM 9 O3' A B2186 96.204 42.818 104.689 1.00 99.81 O
ATOM 10 C2' A B2186 98.467 42.188 105.306 1.00106.09 C
ATOM 11 O2' A B2186 98.836 42.871 104.124 1.00107.79 O
ATOM 12 C1' A B2186 99.348 42.701 106.449 1.00107.65 C
ATOM 13 N9 A B2186 99.891 41.687 107.355 1.00110.84 N
ATOM 14 C8 A B2186 99.218 40.889 108.251 1.00112.26 C
ATOM 15 N7 A B2186 99.998 40.075 108.925 1.00113.18 N
ATOM 16 C5 A B2186 101.271 40.353 108.441 1.00113.15 C
ATOM 17 C6 A B2186 102.542 39.824 108.752 1.00113.34 C
ATOM 18 N6 A B2186 102.748 38.867 109.662 1.00112.69 N
ATOM 19 N1 A B2186 103.607 40.322 108.085 1.00113.54 N
ATOM 20 C2 A B2186 103.402 41.285 107.174 1.00113.33 C
ATOM 21 N3 A B2186 102.262 41.862 106.796 1.00112.83 N
ATOM 22 C4 A B2186 101.220 41.345 107.474 1.00112.59 C
ATOM 23 P C B2187 94.893 41.924 104.432 1.00 95.69 P
ATOM 24 OP1 C B2187 94.358 42.324 103.107 1.00 96.86 O
ATOM 25 OP2 C B2187 94.020 42.014 105.629 1.00 96.77 O
ATOM 26 O5' C B2187 95.438 40.436 104.301 1.00 92.19 O
TER
Atoms:
C2: (96.848,36.922,107.558)
OP1: (94.358,42.324,103.107)
OP2: (94.020,42.014,105.629)
C4: (95.897,38.546,108.935)
O5': (95.438,40.436,104.301)
C3': (95.430,37.536,103.694)
C1': (97.267,37.384,105.148)
O4': (97.452,38.535,104.336)
C5': (95.988,39.948,103.066)
P: (94.893,41.924,104.432)
O2: (97.322,35.788,107.375)
C4': (96.485,38.537,103.251)
C2': (96.265,36.491,104.416)
O2': (96.963,35.641,103.527)
N1: (96.784,37.822,106.478)
N3: (96.392,37.315,108.773)
N4: (95.459,38.893,110.149)
C6: (96.277,39.081,106.663)
C5: (95.829,39.480,107.859)
O3': (94.701,37.004,102.596)
OP1: (94.358,42.324,103.107)
OP2: (94.020,42.014,105.629)
C4: (95.897,38.546,108.935)
O5': (95.438,40.436,104.301)
C3': (95.430,37.536,103.694)
C1': (97.267,37.384,105.148)
O4': (97.452,38.535,104.336)
C5': (95.988,39.948,103.066)
P: (94.893,41.924,104.432)
O2: (97.322,35.788,107.375)
C4': (96.485,38.537,103.251)
C2': (96.265,36.491,104.416)
O2': (96.963,35.641,103.527)
N1: (96.784,37.822,106.478)
N3: (96.392,37.315,108.773)
N4: (95.459,38.893,110.149)
C6: (96.277,39.081,106.663)
C5: (95.829,39.480,107.859)
O3': (94.701,37.004,102.596)
OP1: (94.131,42.185,109.066)
OP2: (95.816,42.345,110.989)
C3': (97.065,42.545,105.798)
C1': (99.348,42.701,106.449)
C5': (96.293,44.127,107.656)
O4': (98.598,43.639,107.198)
C8: (99.218,40.889,108.251)
O2': (98.836,42.871,104.124)
C6: (102.542,39.824,108.752)
C5: (101.271,40.353,108.441)
C4: (101.220,41.345,107.474)
P: (95.222,42.917,109.755)
C4': (97.302,43.831,106.575)
C2': (98.467,42.188,105.306)
C2: (103.402,41.285,107.174)
N1: (103.607,40.322,108.085)
N3: (102.262,41.862,106.796)
N6: (102.748,38.867,109.662)
N7: (99.998,40.075,108.925)
N9: (99.891,41.687,107.355)
O5': (96.397,43.142,108.703)
O3': (96.204,42.818,104.689)
OP2: (95.816,42.345,110.989)
C3': (97.065,42.545,105.798)
C1': (99.348,42.701,106.449)
C5': (96.293,44.127,107.656)
O4': (98.598,43.639,107.198)
C8: (99.218,40.889,108.251)
O2': (98.836,42.871,104.124)
C6: (102.542,39.824,108.752)
C5: (101.271,40.353,108.441)
C4: (101.220,41.345,107.474)
P: (95.222,42.917,109.755)
C4': (97.302,43.831,106.575)
C2': (98.467,42.188,105.306)
C2: (103.402,41.285,107.174)
N1: (103.607,40.322,108.085)
N3: (102.262,41.862,106.796)
N6: (102.748,38.867,109.662)
N7: (99.998,40.075,108.925)
N9: (99.891,41.687,107.355)
O5': (96.397,43.142,108.703)
O3': (96.204,42.818,104.689)
Image (generated by PyMOL):