Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A460:A459
Extra
PDB:
ATOM 1 O3' A A 459 -4.989 146.118 181.606 1.00 5.05 O
ATOM 2 P C A 460 -4.757 145.502 180.146 1.00 4.36 P
ATOM 3 OP1 C A 460 -3.948 144.264 180.313 1.00 4.36 O
ATOM 4 OP2 C A 460 -4.230 146.614 179.290 1.00 4.36 O
ATOM 5 O5' C A 460 -6.234 145.116 179.692 1.00 4.36 O
ATOM 6 C5' C A 460 -6.931 144.061 180.339 1.00 4.36 C
ATOM 7 C4' C A 460 -8.365 143.984 179.893 1.00 4.36 C
ATOM 8 O4' C A 460 -9.041 145.214 180.225 1.00 4.36 O
ATOM 9 C3' C A 460 -8.585 143.839 178.409 1.00 4.36 C
ATOM 10 O3' C A 460 -8.445 142.509 177.962 1.00 4.36 O
ATOM 11 C2' C A 460 -9.978 144.415 178.227 1.00 4.36 C
ATOM 12 O2' C A 460 -10.964 143.519 178.694 1.00 4.36 O
ATOM 13 C1' C A 460 -9.925 145.573 179.196 1.00 4.36 C
ATOM 14 N1 C A 460 -9.420 146.794 178.576 1.00 4.25 N
ATOM 15 C2 C A 460 -10.288 147.635 177.844 1.00 4.25 C
ATOM 16 O2 C A 460 -11.475 147.332 177.676 1.00 4.25 O
ATOM 17 N3 C A 460 -9.814 148.767 177.301 1.00 4.25 N
ATOM 18 C4 C A 460 -8.531 149.061 177.500 1.00 4.25 C
ATOM 19 N4 C A 460 -8.069 150.210 176.974 1.00 4.25 N
ATOM 20 C5 C A 460 -7.644 148.214 178.258 1.00 4.25 C
ATOM 21 C6 C A 460 -8.120 147.098 178.784 1.00 4.25 C
ATOM 22 P C A 461 -7.926 142.222 176.467 1.00 0.03 P
ATOM 23 OP1 C A 461 -7.784 140.732 176.329 1.00 0.03 O
ATOM 24 OP2 C A 461 -6.733 143.084 176.242 1.00 0.03 O
ATOM 25 O5' C A 461 -9.141 142.745 175.579 1.00 0.03 O
TER
ATOM 1 O3' U B 458 -4.082 152.174 180.783 1.00 0.33 O
ATOM 2 P A B 459 -4.152 150.813 179.998 1.00 5.05 P
ATOM 3 OP1 A B 459 -2.752 150.268 179.954 1.00 5.05 O
ATOM 4 OP2 A B 459 -4.872 151.096 178.711 1.00 5.05 O
ATOM 5 O5' A B 459 -5.050 149.909 180.968 1.00 5.05 O
ATOM 6 C5' A B 459 -4.469 149.296 182.108 1.00 5.05 C
ATOM 7 C4' A B 459 -5.381 148.272 182.714 1.00 5.05 C
ATOM 8 O4' A B 459 -6.572 148.926 183.199 1.00 5.05 O
ATOM 9 C3' A B 459 -5.892 147.199 181.766 1.00 5.05 C
ATOM 10 O3' A B 459 -4.989 146.118 181.606 1.00 5.05 O
ATOM 11 C2' A B 459 -7.223 146.791 182.380 1.00 5.05 C
ATOM 12 O2' A B 459 -7.042 145.817 183.408 1.00 5.05 O
ATOM 13 C1' A B 459 -7.700 148.108 183.000 1.00 5.05 C
ATOM 14 N9 A B 459 -8.630 148.824 182.119 1.00 4.73 N
ATOM 15 C8 A B 459 -8.318 149.915 181.353 1.00 4.73 C
ATOM 16 N7 A B 459 -9.325 150.380 180.649 1.00 4.73 N
ATOM 17 C5 A B 459 -10.370 149.525 180.976 1.00 4.73 C
ATOM 18 C6 A B 459 -11.703 149.490 180.544 1.00 4.73 C
ATOM 19 N6 A B 459 -12.219 150.366 179.670 1.00 4.73 N
ATOM 20 N1 A B 459 -12.476 148.507 181.068 1.00 4.73 N
ATOM 21 C2 A B 459 -11.930 147.655 181.945 1.00 4.73 C
ATOM 22 N3 A B 459 -10.693 147.590 182.427 1.00 4.73 N
ATOM 23 C4 A B 459 -9.954 148.562 181.890 1.00 4.73 C
ATOM 24 P C B 460 -4.757 145.502 180.146 1.00 4.36 P
ATOM 25 OP1 C B 460 -3.948 144.264 180.313 1.00 4.36 O
ATOM 26 OP2 C B 460 -4.230 146.614 179.290 1.00 4.36 O
ATOM 27 O5' C B 460 -6.234 145.116 179.692 1.00 4.36 O
TER
ATOM 2 P C A 460 -4.757 145.502 180.146 1.00 4.36 P
ATOM 3 OP1 C A 460 -3.948 144.264 180.313 1.00 4.36 O
ATOM 4 OP2 C A 460 -4.230 146.614 179.290 1.00 4.36 O
ATOM 5 O5' C A 460 -6.234 145.116 179.692 1.00 4.36 O
ATOM 6 C5' C A 460 -6.931 144.061 180.339 1.00 4.36 C
ATOM 7 C4' C A 460 -8.365 143.984 179.893 1.00 4.36 C
ATOM 8 O4' C A 460 -9.041 145.214 180.225 1.00 4.36 O
ATOM 9 C3' C A 460 -8.585 143.839 178.409 1.00 4.36 C
ATOM 10 O3' C A 460 -8.445 142.509 177.962 1.00 4.36 O
ATOM 11 C2' C A 460 -9.978 144.415 178.227 1.00 4.36 C
ATOM 12 O2' C A 460 -10.964 143.519 178.694 1.00 4.36 O
ATOM 13 C1' C A 460 -9.925 145.573 179.196 1.00 4.36 C
ATOM 14 N1 C A 460 -9.420 146.794 178.576 1.00 4.25 N
ATOM 15 C2 C A 460 -10.288 147.635 177.844 1.00 4.25 C
ATOM 16 O2 C A 460 -11.475 147.332 177.676 1.00 4.25 O
ATOM 17 N3 C A 460 -9.814 148.767 177.301 1.00 4.25 N
ATOM 18 C4 C A 460 -8.531 149.061 177.500 1.00 4.25 C
ATOM 19 N4 C A 460 -8.069 150.210 176.974 1.00 4.25 N
ATOM 20 C5 C A 460 -7.644 148.214 178.258 1.00 4.25 C
ATOM 21 C6 C A 460 -8.120 147.098 178.784 1.00 4.25 C
ATOM 22 P C A 461 -7.926 142.222 176.467 1.00 0.03 P
ATOM 23 OP1 C A 461 -7.784 140.732 176.329 1.00 0.03 O
ATOM 24 OP2 C A 461 -6.733 143.084 176.242 1.00 0.03 O
ATOM 25 O5' C A 461 -9.141 142.745 175.579 1.00 0.03 O
TER
ATOM 1 O3' U B 458 -4.082 152.174 180.783 1.00 0.33 O
ATOM 2 P A B 459 -4.152 150.813 179.998 1.00 5.05 P
ATOM 3 OP1 A B 459 -2.752 150.268 179.954 1.00 5.05 O
ATOM 4 OP2 A B 459 -4.872 151.096 178.711 1.00 5.05 O
ATOM 5 O5' A B 459 -5.050 149.909 180.968 1.00 5.05 O
ATOM 6 C5' A B 459 -4.469 149.296 182.108 1.00 5.05 C
ATOM 7 C4' A B 459 -5.381 148.272 182.714 1.00 5.05 C
ATOM 8 O4' A B 459 -6.572 148.926 183.199 1.00 5.05 O
ATOM 9 C3' A B 459 -5.892 147.199 181.766 1.00 5.05 C
ATOM 10 O3' A B 459 -4.989 146.118 181.606 1.00 5.05 O
ATOM 11 C2' A B 459 -7.223 146.791 182.380 1.00 5.05 C
ATOM 12 O2' A B 459 -7.042 145.817 183.408 1.00 5.05 O
ATOM 13 C1' A B 459 -7.700 148.108 183.000 1.00 5.05 C
ATOM 14 N9 A B 459 -8.630 148.824 182.119 1.00 4.73 N
ATOM 15 C8 A B 459 -8.318 149.915 181.353 1.00 4.73 C
ATOM 16 N7 A B 459 -9.325 150.380 180.649 1.00 4.73 N
ATOM 17 C5 A B 459 -10.370 149.525 180.976 1.00 4.73 C
ATOM 18 C6 A B 459 -11.703 149.490 180.544 1.00 4.73 C
ATOM 19 N6 A B 459 -12.219 150.366 179.670 1.00 4.73 N
ATOM 20 N1 A B 459 -12.476 148.507 181.068 1.00 4.73 N
ATOM 21 C2 A B 459 -11.930 147.655 181.945 1.00 4.73 C
ATOM 22 N3 A B 459 -10.693 147.590 182.427 1.00 4.73 N
ATOM 23 C4 A B 459 -9.954 148.562 181.890 1.00 4.73 C
ATOM 24 P C B 460 -4.757 145.502 180.146 1.00 4.36 P
ATOM 25 OP1 C B 460 -3.948 144.264 180.313 1.00 4.36 O
ATOM 26 OP2 C B 460 -4.230 146.614 179.290 1.00 4.36 O
ATOM 27 O5' C B 460 -6.234 145.116 179.692 1.00 4.36 O
TER
Atoms:
C2: (-10.288,147.635,177.844)
OP1: (-3.948,144.264,180.313)
OP2: (-4.230,146.614,179.290)
C4: (-8.531,149.061,177.500)
O5': (-6.234,145.116,179.692)
C3': (-8.585,143.839,178.409)
C1': (-9.925,145.573,179.196)
O4': (-9.041,145.214,180.225)
C5': (-6.931,144.061,180.339)
P: (-4.757,145.502,180.146)
O2: (-11.475,147.332,177.676)
C4': (-8.365,143.984,179.893)
C2': (-9.978,144.415,178.227)
O2': (-10.964,143.519,178.694)
N1: (-9.420,146.794,178.576)
N3: (-9.814,148.767,177.301)
N4: (-8.069,150.210,176.974)
C6: (-8.120,147.098,178.784)
C5: (-7.644,148.214,178.258)
O3': (-8.445,142.509,177.962)
OP1: (-3.948,144.264,180.313)
OP2: (-4.230,146.614,179.290)
C4: (-8.531,149.061,177.500)
O5': (-6.234,145.116,179.692)
C3': (-8.585,143.839,178.409)
C1': (-9.925,145.573,179.196)
O4': (-9.041,145.214,180.225)
C5': (-6.931,144.061,180.339)
P: (-4.757,145.502,180.146)
O2: (-11.475,147.332,177.676)
C4': (-8.365,143.984,179.893)
C2': (-9.978,144.415,178.227)
O2': (-10.964,143.519,178.694)
N1: (-9.420,146.794,178.576)
N3: (-9.814,148.767,177.301)
N4: (-8.069,150.210,176.974)
C6: (-8.120,147.098,178.784)
C5: (-7.644,148.214,178.258)
O3': (-8.445,142.509,177.962)
OP1: (-2.752,150.268,179.954)
OP2: (-4.872,151.096,178.711)
C3': (-5.892,147.199,181.766)
C1': (-7.700,148.108,183.000)
C5': (-4.469,149.296,182.108)
O4': (-6.572,148.926,183.199)
C8: (-8.318,149.915,181.353)
O2': (-7.042,145.817,183.408)
C6: (-11.703,149.490,180.544)
C5: (-10.370,149.525,180.976)
C4: (-9.954,148.562,181.890)
P: (-4.152,150.813,179.998)
C4': (-5.381,148.272,182.714)
C2': (-7.223,146.791,182.380)
C2: (-11.930,147.655,181.945)
N1: (-12.476,148.507,181.068)
N3: (-10.693,147.590,182.427)
N6: (-12.219,150.366,179.670)
N7: (-9.325,150.380,180.649)
N9: (-8.630,148.824,182.119)
O5': (-5.050,149.909,180.968)
O3': (-4.989,146.118,181.606)
OP2: (-4.872,151.096,178.711)
C3': (-5.892,147.199,181.766)
C1': (-7.700,148.108,183.000)
C5': (-4.469,149.296,182.108)
O4': (-6.572,148.926,183.199)
C8: (-8.318,149.915,181.353)
O2': (-7.042,145.817,183.408)
C6: (-11.703,149.490,180.544)
C5: (-10.370,149.525,180.976)
C4: (-9.954,148.562,181.890)
P: (-4.152,150.813,179.998)
C4': (-5.381,148.272,182.714)
C2': (-7.223,146.791,182.380)
C2: (-11.930,147.655,181.945)
N1: (-12.476,148.507,181.068)
N3: (-10.693,147.590,182.427)
N6: (-12.219,150.366,179.670)
N7: (-9.325,150.380,180.649)
N9: (-8.630,148.824,182.119)
O5': (-5.050,149.909,180.968)
O3': (-4.989,146.118,181.606)
Image (generated by PyMOL):