Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0232:0231
Extra
PDB:
ATOM 1 O3' A A 231 93.618 103.804 -1.231 1.00 57.16 O
ATOM 2 P C A 232 94.368 104.881 -2.151 1.00 59.11 P
ATOM 3 OP1 C A 232 95.617 104.237 -2.649 1.00 57.06 O
ATOM 4 OP2 C A 232 94.454 106.167 -1.418 1.00 59.63 O
ATOM 5 O5' C A 232 93.349 105.095 -3.350 1.00 57.53 O
ATOM 6 C5' C A 232 92.906 103.982 -4.140 1.00 59.01 C
ATOM 7 C4' C A 232 91.866 104.436 -5.121 1.00 58.78 C
ATOM 8 O4' C A 232 90.622 104.701 -4.425 1.00 59.29 O
ATOM 9 C3' C A 232 92.208 105.753 -5.781 1.00 58.39 C
ATOM 10 O3' C A 232 93.125 105.587 -6.843 1.00 59.46 O
ATOM 11 C2' C A 232 90.841 106.286 -6.179 1.00 57.86 C
ATOM 12 O2' C A 232 90.320 105.677 -7.340 1.00 58.83 O
ATOM 13 C1' C A 232 90.008 105.859 -4.969 1.00 57.08 C
ATOM 14 N1 C A 232 89.961 106.881 -3.911 1.00 54.01 N
ATOM 15 C2 C A 232 88.922 107.810 -3.921 1.00 52.65 C
ATOM 16 O2 C A 232 88.080 107.754 -4.823 1.00 52.01 O
ATOM 17 N3 C A 232 88.861 108.744 -2.946 1.00 52.72 N
ATOM 18 C4 C A 232 89.790 108.768 -1.987 1.00 53.13 C
ATOM 19 N4 C A 232 89.684 109.698 -1.036 1.00 53.61 N
ATOM 20 C5 C A 232 90.867 107.837 -1.959 1.00 52.95 C
ATOM 21 C6 C A 232 90.914 106.921 -2.929 1.00 53.16 C
ATOM 22 P C A 233 94.056 106.819 -7.274 1.00 60.01 P
ATOM 23 OP1 C A 233 94.907 106.344 -8.394 1.00 60.02 O
ATOM 24 OP2 C A 233 94.692 107.391 -6.061 1.00 58.65 O
ATOM 25 O5' C A 233 92.984 107.856 -7.825 1.00 57.76 O
TER
ATOM 1 O3' A B 230 92.843 107.433 3.603 1.00 49.45 O
ATOM 2 P A B 231 93.028 107.784 2.043 1.00 51.68 P
ATOM 3 OP1 A B 231 94.476 108.080 1.866 1.00 49.90 O
ATOM 4 OP2 A B 231 92.003 108.795 1.623 1.00 46.92 O
ATOM 5 O5' A B 231 92.669 106.420 1.301 1.00 50.34 O
ATOM 6 C5' A B 231 93.341 105.187 1.632 1.00 51.80 C
ATOM 7 C4' A B 231 92.644 104.022 0.963 1.00 54.05 C
ATOM 8 O4' A B 231 91.302 103.875 1.497 1.00 54.38 O
ATOM 9 C3' A B 231 92.433 104.177 -0.533 1.00 55.18 C
ATOM 10 O3' A B 231 93.618 103.804 -1.231 1.00 57.16 O
ATOM 11 C2' A B 231 91.247 103.253 -0.804 1.00 53.48 C
ATOM 12 O2' A B 231 91.604 101.890 -0.937 1.00 54.59 O
ATOM 13 C1' A B 231 90.425 103.431 0.478 1.00 51.07 C
ATOM 14 N9 A B 231 89.324 104.388 0.372 1.00 47.37 N
ATOM 15 C8 A B 231 89.395 105.752 0.276 1.00 46.34 C
ATOM 16 N7 A B 231 88.227 106.337 0.169 1.00 45.46 N
ATOM 17 C5 A B 231 87.325 105.287 0.204 1.00 45.95 C
ATOM 18 C6 A B 231 85.918 105.242 0.126 1.00 47.16 C
ATOM 19 N6 A B 231 85.146 106.322 -0.026 1.00 45.09 N
ATOM 20 N1 A B 231 85.325 104.030 0.205 1.00 48.10 N
ATOM 21 C2 A B 231 86.102 102.943 0.342 1.00 47.98 C
ATOM 22 N3 A B 231 87.430 102.858 0.417 1.00 47.25 N
ATOM 23 C4 A B 231 87.987 104.079 0.341 1.00 46.63 C
ATOM 24 P C B 232 94.368 104.881 -2.151 1.00 59.11 P
ATOM 25 OP1 C B 232 95.617 104.237 -2.649 1.00 57.06 O
ATOM 26 OP2 C B 232 94.454 106.167 -1.418 1.00 59.63 O
ATOM 27 O5' C B 232 93.349 105.095 -3.350 1.00 57.53 O
TER
ATOM 2 P C A 232 94.368 104.881 -2.151 1.00 59.11 P
ATOM 3 OP1 C A 232 95.617 104.237 -2.649 1.00 57.06 O
ATOM 4 OP2 C A 232 94.454 106.167 -1.418 1.00 59.63 O
ATOM 5 O5' C A 232 93.349 105.095 -3.350 1.00 57.53 O
ATOM 6 C5' C A 232 92.906 103.982 -4.140 1.00 59.01 C
ATOM 7 C4' C A 232 91.866 104.436 -5.121 1.00 58.78 C
ATOM 8 O4' C A 232 90.622 104.701 -4.425 1.00 59.29 O
ATOM 9 C3' C A 232 92.208 105.753 -5.781 1.00 58.39 C
ATOM 10 O3' C A 232 93.125 105.587 -6.843 1.00 59.46 O
ATOM 11 C2' C A 232 90.841 106.286 -6.179 1.00 57.86 C
ATOM 12 O2' C A 232 90.320 105.677 -7.340 1.00 58.83 O
ATOM 13 C1' C A 232 90.008 105.859 -4.969 1.00 57.08 C
ATOM 14 N1 C A 232 89.961 106.881 -3.911 1.00 54.01 N
ATOM 15 C2 C A 232 88.922 107.810 -3.921 1.00 52.65 C
ATOM 16 O2 C A 232 88.080 107.754 -4.823 1.00 52.01 O
ATOM 17 N3 C A 232 88.861 108.744 -2.946 1.00 52.72 N
ATOM 18 C4 C A 232 89.790 108.768 -1.987 1.00 53.13 C
ATOM 19 N4 C A 232 89.684 109.698 -1.036 1.00 53.61 N
ATOM 20 C5 C A 232 90.867 107.837 -1.959 1.00 52.95 C
ATOM 21 C6 C A 232 90.914 106.921 -2.929 1.00 53.16 C
ATOM 22 P C A 233 94.056 106.819 -7.274 1.00 60.01 P
ATOM 23 OP1 C A 233 94.907 106.344 -8.394 1.00 60.02 O
ATOM 24 OP2 C A 233 94.692 107.391 -6.061 1.00 58.65 O
ATOM 25 O5' C A 233 92.984 107.856 -7.825 1.00 57.76 O
TER
ATOM 1 O3' A B 230 92.843 107.433 3.603 1.00 49.45 O
ATOM 2 P A B 231 93.028 107.784 2.043 1.00 51.68 P
ATOM 3 OP1 A B 231 94.476 108.080 1.866 1.00 49.90 O
ATOM 4 OP2 A B 231 92.003 108.795 1.623 1.00 46.92 O
ATOM 5 O5' A B 231 92.669 106.420 1.301 1.00 50.34 O
ATOM 6 C5' A B 231 93.341 105.187 1.632 1.00 51.80 C
ATOM 7 C4' A B 231 92.644 104.022 0.963 1.00 54.05 C
ATOM 8 O4' A B 231 91.302 103.875 1.497 1.00 54.38 O
ATOM 9 C3' A B 231 92.433 104.177 -0.533 1.00 55.18 C
ATOM 10 O3' A B 231 93.618 103.804 -1.231 1.00 57.16 O
ATOM 11 C2' A B 231 91.247 103.253 -0.804 1.00 53.48 C
ATOM 12 O2' A B 231 91.604 101.890 -0.937 1.00 54.59 O
ATOM 13 C1' A B 231 90.425 103.431 0.478 1.00 51.07 C
ATOM 14 N9 A B 231 89.324 104.388 0.372 1.00 47.37 N
ATOM 15 C8 A B 231 89.395 105.752 0.276 1.00 46.34 C
ATOM 16 N7 A B 231 88.227 106.337 0.169 1.00 45.46 N
ATOM 17 C5 A B 231 87.325 105.287 0.204 1.00 45.95 C
ATOM 18 C6 A B 231 85.918 105.242 0.126 1.00 47.16 C
ATOM 19 N6 A B 231 85.146 106.322 -0.026 1.00 45.09 N
ATOM 20 N1 A B 231 85.325 104.030 0.205 1.00 48.10 N
ATOM 21 C2 A B 231 86.102 102.943 0.342 1.00 47.98 C
ATOM 22 N3 A B 231 87.430 102.858 0.417 1.00 47.25 N
ATOM 23 C4 A B 231 87.987 104.079 0.341 1.00 46.63 C
ATOM 24 P C B 232 94.368 104.881 -2.151 1.00 59.11 P
ATOM 25 OP1 C B 232 95.617 104.237 -2.649 1.00 57.06 O
ATOM 26 OP2 C B 232 94.454 106.167 -1.418 1.00 59.63 O
ATOM 27 O5' C B 232 93.349 105.095 -3.350 1.00 57.53 O
TER
Atoms:
C2: (88.922,107.810,-3.921)
OP1: (95.617,104.237,-2.649)
OP2: (94.454,106.167,-1.418)
C4: (89.790,108.768,-1.987)
O5': (93.349,105.095,-3.350)
C3': (92.208,105.753,-5.781)
C1': (90.008,105.859,-4.969)
O4': (90.622,104.701,-4.425)
C5': (92.906,103.982,-4.140)
P: (94.368,104.881,-2.151)
O2: (88.080,107.754,-4.823)
C4': (91.866,104.436,-5.121)
C2': (90.841,106.286,-6.179)
O2': (90.320,105.677,-7.340)
N1: (89.961,106.881,-3.911)
N3: (88.861,108.744,-2.946)
N4: (89.684,109.698,-1.036)
C6: (90.914,106.921,-2.929)
C5: (90.867,107.837,-1.959)
O3': (93.125,105.587,-6.843)
OP1: (95.617,104.237,-2.649)
OP2: (94.454,106.167,-1.418)
C4: (89.790,108.768,-1.987)
O5': (93.349,105.095,-3.350)
C3': (92.208,105.753,-5.781)
C1': (90.008,105.859,-4.969)
O4': (90.622,104.701,-4.425)
C5': (92.906,103.982,-4.140)
P: (94.368,104.881,-2.151)
O2: (88.080,107.754,-4.823)
C4': (91.866,104.436,-5.121)
C2': (90.841,106.286,-6.179)
O2': (90.320,105.677,-7.340)
N1: (89.961,106.881,-3.911)
N3: (88.861,108.744,-2.946)
N4: (89.684,109.698,-1.036)
C6: (90.914,106.921,-2.929)
C5: (90.867,107.837,-1.959)
O3': (93.125,105.587,-6.843)
OP1: (94.476,108.080,1.866)
OP2: (92.003,108.795,1.623)
C3': (92.433,104.177,-0.533)
C1': (90.425,103.431,0.478)
C5': (93.341,105.187,1.632)
O4': (91.302,103.875,1.497)
C8: (89.395,105.752,0.276)
O2': (91.604,101.890,-0.937)
C6: (85.918,105.242,0.126)
C5: (87.325,105.287,0.204)
C4: (87.987,104.079,0.341)
P: (93.028,107.784,2.043)
C4': (92.644,104.022,0.963)
C2': (91.247,103.253,-0.804)
C2: (86.102,102.943,0.342)
N1: (85.325,104.030,0.205)
N3: (87.430,102.858,0.417)
N6: (85.146,106.322,-0.026)
N7: (88.227,106.337,0.169)
N9: (89.324,104.388,0.372)
O5': (92.669,106.420,1.301)
O3': (93.618,103.804,-1.231)
OP2: (92.003,108.795,1.623)
C3': (92.433,104.177,-0.533)
C1': (90.425,103.431,0.478)
C5': (93.341,105.187,1.632)
O4': (91.302,103.875,1.497)
C8: (89.395,105.752,0.276)
O2': (91.604,101.890,-0.937)
C6: (85.918,105.242,0.126)
C5: (87.325,105.287,0.204)
C4: (87.987,104.079,0.341)
P: (93.028,107.784,2.043)
C4': (92.644,104.022,0.963)
C2': (91.247,103.253,-0.804)
C2: (86.102,102.943,0.342)
N1: (85.325,104.030,0.205)
N3: (87.430,102.858,0.417)
N6: (85.146,106.322,-0.026)
N7: (88.227,106.337,0.169)
N9: (89.324,104.388,0.372)
O5': (92.669,106.420,1.301)
O3': (93.618,103.804,-1.231)
Image (generated by PyMOL):