Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01167:01166
Extra
PDB:
ATOM 1 O3' A A1166 54.700 79.310 173.207 1.00101.17 O
ATOM 2 P C A1167 53.135 78.943 173.227 1.00100.28 P
ATOM 3 OP1 C A1167 52.817 78.281 171.932 1.00100.76 O
ATOM 4 OP2 C A1167 52.347 80.131 173.655 1.00 98.92 O
ATOM 5 O5' C A1167 53.048 77.846 174.372 1.00 98.50 O
ATOM 6 C5' C A1167 52.130 77.993 175.451 1.00 95.25 C
ATOM 7 C4' C A1167 52.777 77.584 176.746 1.00 92.74 C
ATOM 8 O4' C A1167 53.928 78.428 177.028 1.00 92.34 O
ATOM 9 C3' C A1167 51.863 77.791 177.932 1.00 91.18 C
ATOM 10 O3' C A1167 50.958 76.712 178.044 1.00 87.77 O
ATOM 11 C2' C A1167 52.848 77.939 179.076 1.00 91.85 C
ATOM 12 O2' C A1167 53.395 76.704 179.486 1.00 91.86 O
ATOM 13 C1' C A1167 53.932 78.787 178.404 1.00 92.92 C
ATOM 14 N1 C A1167 53.656 80.242 178.503 1.00 94.28 N
ATOM 15 C2 C A1167 53.657 80.864 179.774 1.00 94.47 C
ATOM 16 O2 C A1167 53.903 80.185 180.787 1.00 94.03 O
ATOM 17 N3 C A1167 53.387 82.189 179.857 1.00 94.54 N
ATOM 18 C4 C A1167 53.126 82.891 178.750 1.00 94.35 C
ATOM 19 N4 C A1167 52.858 84.190 178.884 1.00 94.20 N
ATOM 20 C5 C A1167 53.127 82.291 177.457 1.00 94.25 C
ATOM 21 C6 C A1167 53.394 80.981 177.379 1.00 94.23 C
ATOM 22 P C A1168 49.390 76.980 177.847 1.00 85.28 P
ATOM 23 OP1 C A1168 48.772 75.704 177.404 1.00 84.39 O
ATOM 24 OP2 C A1168 49.206 78.203 177.028 1.00 84.42 O
ATOM 25 O5' C A1168 48.907 77.307 179.326 1.00 84.52 O
TER
ATOM 1 O3' U B1165 54.759 86.193 173.668 1.00111.31 O
ATOM 2 P A B1166 53.800 84.956 174.019 1.00108.38 P
ATOM 3 OP1 A B1166 52.477 85.223 173.398 1.00108.50 O
ATOM 4 OP2 A B1166 53.884 84.679 175.478 1.00107.51 O
ATOM 5 O5' A B1166 54.481 83.749 173.239 1.00106.60 O
ATOM 6 C5' A B1166 54.175 82.400 173.581 1.00104.22 C
ATOM 7 C4' A B1166 55.425 81.561 173.568 1.00102.65 C
ATOM 8 O4' A B1166 56.456 82.188 174.369 1.00102.08 O
ATOM 9 C3' A B1166 55.228 80.193 174.187 1.00101.76 C
ATOM 10 O3' A B1166 54.700 79.310 173.207 1.00101.17 O
ATOM 11 C2' A B1166 56.634 79.829 174.646 1.00101.25 C
ATOM 12 O2' A B1166 57.440 79.330 173.599 1.00101.04 O
ATOM 13 C1' A B1166 57.173 81.196 175.085 1.00101.37 C
ATOM 14 N9 A B1166 57.049 81.490 176.515 1.00101.10 N
ATOM 15 C8 A B1166 56.386 82.546 177.094 1.00100.92 C
ATOM 16 N7 A B1166 56.454 82.562 178.402 1.00100.70 N
ATOM 17 C5 A B1166 57.210 81.441 178.709 1.00101.40 C
ATOM 18 C6 A B1166 57.634 80.896 179.934 1.00101.83 C
ATOM 19 N6 A B1166 57.341 81.427 181.123 1.00101.28 N
ATOM 20 N1 A B1166 58.377 79.767 179.894 1.00102.35 N
ATOM 21 C2 A B1166 58.662 79.229 178.700 1.00102.57 C
ATOM 22 N3 A B1166 58.317 79.646 177.482 1.00102.26 N
ATOM 23 C4 A B1166 57.584 80.771 177.557 1.00101.57 C
ATOM 24 P C B1167 53.135 78.943 173.227 1.00100.28 P
ATOM 25 OP1 C B1167 52.817 78.281 171.932 1.00100.76 O
ATOM 26 OP2 C B1167 52.347 80.131 173.655 1.00 98.92 O
ATOM 27 O5' C B1167 53.048 77.846 174.372 1.00 98.50 O
TER
ATOM 2 P C A1167 53.135 78.943 173.227 1.00100.28 P
ATOM 3 OP1 C A1167 52.817 78.281 171.932 1.00100.76 O
ATOM 4 OP2 C A1167 52.347 80.131 173.655 1.00 98.92 O
ATOM 5 O5' C A1167 53.048 77.846 174.372 1.00 98.50 O
ATOM 6 C5' C A1167 52.130 77.993 175.451 1.00 95.25 C
ATOM 7 C4' C A1167 52.777 77.584 176.746 1.00 92.74 C
ATOM 8 O4' C A1167 53.928 78.428 177.028 1.00 92.34 O
ATOM 9 C3' C A1167 51.863 77.791 177.932 1.00 91.18 C
ATOM 10 O3' C A1167 50.958 76.712 178.044 1.00 87.77 O
ATOM 11 C2' C A1167 52.848 77.939 179.076 1.00 91.85 C
ATOM 12 O2' C A1167 53.395 76.704 179.486 1.00 91.86 O
ATOM 13 C1' C A1167 53.932 78.787 178.404 1.00 92.92 C
ATOM 14 N1 C A1167 53.656 80.242 178.503 1.00 94.28 N
ATOM 15 C2 C A1167 53.657 80.864 179.774 1.00 94.47 C
ATOM 16 O2 C A1167 53.903 80.185 180.787 1.00 94.03 O
ATOM 17 N3 C A1167 53.387 82.189 179.857 1.00 94.54 N
ATOM 18 C4 C A1167 53.126 82.891 178.750 1.00 94.35 C
ATOM 19 N4 C A1167 52.858 84.190 178.884 1.00 94.20 N
ATOM 20 C5 C A1167 53.127 82.291 177.457 1.00 94.25 C
ATOM 21 C6 C A1167 53.394 80.981 177.379 1.00 94.23 C
ATOM 22 P C A1168 49.390 76.980 177.847 1.00 85.28 P
ATOM 23 OP1 C A1168 48.772 75.704 177.404 1.00 84.39 O
ATOM 24 OP2 C A1168 49.206 78.203 177.028 1.00 84.42 O
ATOM 25 O5' C A1168 48.907 77.307 179.326 1.00 84.52 O
TER
ATOM 1 O3' U B1165 54.759 86.193 173.668 1.00111.31 O
ATOM 2 P A B1166 53.800 84.956 174.019 1.00108.38 P
ATOM 3 OP1 A B1166 52.477 85.223 173.398 1.00108.50 O
ATOM 4 OP2 A B1166 53.884 84.679 175.478 1.00107.51 O
ATOM 5 O5' A B1166 54.481 83.749 173.239 1.00106.60 O
ATOM 6 C5' A B1166 54.175 82.400 173.581 1.00104.22 C
ATOM 7 C4' A B1166 55.425 81.561 173.568 1.00102.65 C
ATOM 8 O4' A B1166 56.456 82.188 174.369 1.00102.08 O
ATOM 9 C3' A B1166 55.228 80.193 174.187 1.00101.76 C
ATOM 10 O3' A B1166 54.700 79.310 173.207 1.00101.17 O
ATOM 11 C2' A B1166 56.634 79.829 174.646 1.00101.25 C
ATOM 12 O2' A B1166 57.440 79.330 173.599 1.00101.04 O
ATOM 13 C1' A B1166 57.173 81.196 175.085 1.00101.37 C
ATOM 14 N9 A B1166 57.049 81.490 176.515 1.00101.10 N
ATOM 15 C8 A B1166 56.386 82.546 177.094 1.00100.92 C
ATOM 16 N7 A B1166 56.454 82.562 178.402 1.00100.70 N
ATOM 17 C5 A B1166 57.210 81.441 178.709 1.00101.40 C
ATOM 18 C6 A B1166 57.634 80.896 179.934 1.00101.83 C
ATOM 19 N6 A B1166 57.341 81.427 181.123 1.00101.28 N
ATOM 20 N1 A B1166 58.377 79.767 179.894 1.00102.35 N
ATOM 21 C2 A B1166 58.662 79.229 178.700 1.00102.57 C
ATOM 22 N3 A B1166 58.317 79.646 177.482 1.00102.26 N
ATOM 23 C4 A B1166 57.584 80.771 177.557 1.00101.57 C
ATOM 24 P C B1167 53.135 78.943 173.227 1.00100.28 P
ATOM 25 OP1 C B1167 52.817 78.281 171.932 1.00100.76 O
ATOM 26 OP2 C B1167 52.347 80.131 173.655 1.00 98.92 O
ATOM 27 O5' C B1167 53.048 77.846 174.372 1.00 98.50 O
TER
Atoms:
C2: (53.657,80.864,179.774)
OP1: (52.817,78.281,171.932)
OP2: (52.347,80.131,173.655)
C4: (53.126,82.891,178.750)
O5': (53.048,77.846,174.372)
C3': (51.863,77.791,177.932)
C1': (53.932,78.787,178.404)
O4': (53.928,78.428,177.028)
C5': (52.130,77.993,175.451)
P: (53.135,78.943,173.227)
O2: (53.903,80.185,180.787)
C4': (52.777,77.584,176.746)
C2': (52.848,77.939,179.076)
O2': (53.395,76.704,179.486)
N1: (53.656,80.242,178.503)
N3: (53.387,82.189,179.857)
N4: (52.858,84.190,178.884)
C6: (53.394,80.981,177.379)
C5: (53.127,82.291,177.457)
O3': (50.958,76.712,178.044)
OP1: (52.817,78.281,171.932)
OP2: (52.347,80.131,173.655)
C4: (53.126,82.891,178.750)
O5': (53.048,77.846,174.372)
C3': (51.863,77.791,177.932)
C1': (53.932,78.787,178.404)
O4': (53.928,78.428,177.028)
C5': (52.130,77.993,175.451)
P: (53.135,78.943,173.227)
O2: (53.903,80.185,180.787)
C4': (52.777,77.584,176.746)
C2': (52.848,77.939,179.076)
O2': (53.395,76.704,179.486)
N1: (53.656,80.242,178.503)
N3: (53.387,82.189,179.857)
N4: (52.858,84.190,178.884)
C6: (53.394,80.981,177.379)
C5: (53.127,82.291,177.457)
O3': (50.958,76.712,178.044)
OP1: (52.477,85.223,173.398)
OP2: (53.884,84.679,175.478)
C3': (55.228,80.193,174.187)
C1': (57.173,81.196,175.085)
C5': (54.175,82.400,173.581)
O4': (56.456,82.188,174.369)
C8: (56.386,82.546,177.094)
O2': (57.440,79.330,173.599)
C6: (57.634,80.896,179.934)
C5: (57.210,81.441,178.709)
C4: (57.584,80.771,177.557)
P: (53.800,84.956,174.019)
C4': (55.425,81.561,173.568)
C2': (56.634,79.829,174.646)
C2: (58.662,79.229,178.700)
N1: (58.377,79.767,179.894)
N3: (58.317,79.646,177.482)
N6: (57.341,81.427,181.123)
N7: (56.454,82.562,178.402)
N9: (57.049,81.490,176.515)
O5': (54.481,83.749,173.239)
O3': (54.700,79.310,173.207)
OP2: (53.884,84.679,175.478)
C3': (55.228,80.193,174.187)
C1': (57.173,81.196,175.085)
C5': (54.175,82.400,173.581)
O4': (56.456,82.188,174.369)
C8: (56.386,82.546,177.094)
O2': (57.440,79.330,173.599)
C6: (57.634,80.896,179.934)
C5: (57.210,81.441,178.709)
C4: (57.584,80.771,177.557)
P: (53.800,84.956,174.019)
C4': (55.425,81.561,173.568)
C2': (56.634,79.829,174.646)
C2: (58.662,79.229,178.700)
N1: (58.377,79.767,179.894)
N3: (58.317,79.646,177.482)
N6: (57.341,81.427,181.123)
N7: (56.454,82.562,178.402)
N9: (57.049,81.490,176.515)
O5': (54.481,83.749,173.239)
O3': (54.700,79.310,173.207)
Image (generated by PyMOL):