Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02515:02514
Extra
PDB:
ATOM 1 O3' A A2514 30.245 134.659 133.594 1.00 58.33 O
ATOM 2 P C A2515 31.469 133.773 134.123 1.00 61.44 P
ATOM 3 OP1 C A2515 30.907 132.425 134.435 1.00 59.78 O
ATOM 4 OP2 C A2515 32.190 134.541 135.175 1.00 61.27 O
ATOM 5 O5' C A2515 32.408 133.646 132.847 1.00 61.19 O
ATOM 6 C5' C A2515 33.721 134.207 132.828 1.00 60.69 C
ATOM 7 C4' C A2515 33.954 134.893 131.510 1.00 61.78 C
ATOM 8 O4' C A2515 33.333 136.207 131.528 1.00 61.82 O
ATOM 9 C3' C A2515 35.403 135.190 131.196 1.00 62.37 C
ATOM 10 O3' C A2515 36.062 134.050 130.682 1.00 61.14 O
ATOM 11 C2' C A2515 35.290 136.325 130.192 1.00 62.14 C
ATOM 12 O2' C A2515 34.931 135.889 128.899 1.00 63.37 O
ATOM 13 C1' C A2515 34.143 137.130 130.805 1.00 60.71 C
ATOM 14 N1 C A2515 34.662 138.135 131.748 1.00 58.26 N
ATOM 15 C2 C A2515 35.421 139.195 131.251 1.00 57.14 C
ATOM 16 O2 C A2515 35.615 139.274 130.035 1.00 55.31 O
ATOM 17 N3 C A2515 35.924 140.104 132.108 1.00 58.34 N
ATOM 18 C4 C A2515 35.694 139.987 133.417 1.00 59.15 C
ATOM 19 N4 C A2515 36.221 140.902 134.229 1.00 58.84 N
ATOM 20 C5 C A2515 34.916 138.924 133.952 1.00 59.38 C
ATOM 21 C6 C A2515 34.422 138.030 133.090 1.00 59.16 C
ATOM 22 P A A2516 37.570 133.764 131.121 1.00 60.99 P
ATOM 23 OP1 A A2516 37.937 132.451 130.541 1.00 61.88 O
ATOM 24 OP2 A A2516 37.679 133.981 132.584 1.00 59.71 O
ATOM 25 O5' A A2516 38.384 134.916 130.388 1.00 57.71 O
TER
ATOM 1 O3' G B2513 30.572 140.090 136.165 1.00 54.56 O
ATOM 2 P A B2514 31.377 138.815 136.718 1.00 57.21 P
ATOM 3 OP1 A B2514 30.763 138.394 138.004 1.00 57.75 O
ATOM 4 OP2 A B2514 32.830 139.136 136.662 1.00 56.45 O
ATOM 5 O5' A B2514 31.067 137.670 135.661 1.00 56.07 O
ATOM 6 C5' A B2514 29.766 137.083 135.587 1.00 54.30 C
ATOM 7 C4' A B2514 29.405 136.830 134.152 1.00 54.68 C
ATOM 8 O4' A B2514 29.332 138.089 133.448 1.00 53.14 O
ATOM 9 C3' A B2514 30.431 136.042 133.364 1.00 54.28 C
ATOM 10 O3' A B2514 30.245 134.659 133.594 1.00 58.33 O
ATOM 11 C2' A B2514 30.097 136.423 131.932 1.00 51.98 C
ATOM 12 O2' A B2514 28.972 135.718 131.459 1.00 49.96 O
ATOM 13 C1' A B2514 29.705 137.891 132.100 1.00 51.21 C
ATOM 14 N9 A B2514 30.729 138.873 131.757 1.00 49.82 N
ATOM 15 C8 A B2514 31.483 139.650 132.603 1.00 49.12 C
ATOM 16 N7 A B2514 32.267 140.496 131.983 1.00 48.88 N
ATOM 17 C5 A B2514 32.024 140.248 130.639 1.00 49.11 C
ATOM 18 C6 A B2514 32.529 140.829 129.468 1.00 49.51 C
ATOM 19 N6 A B2514 33.405 141.835 129.466 1.00 51.28 N
ATOM 20 N1 A B2514 32.090 140.344 128.283 1.00 48.69 N
ATOM 21 C2 A B2514 31.195 139.352 128.292 1.00 48.19 C
ATOM 22 N3 A B2514 30.635 138.735 129.327 1.00 47.72 N
ATOM 23 C4 A B2514 31.097 139.237 130.486 1.00 49.01 C
ATOM 24 P C B2515 31.469 133.773 134.123 1.00 61.44 P
ATOM 25 OP1 C B2515 30.907 132.425 134.435 1.00 59.78 O
ATOM 26 OP2 C B2515 32.190 134.541 135.175 1.00 61.27 O
ATOM 27 O5' C B2515 32.408 133.646 132.847 1.00 61.19 O
TER
ATOM 2 P C A2515 31.469 133.773 134.123 1.00 61.44 P
ATOM 3 OP1 C A2515 30.907 132.425 134.435 1.00 59.78 O
ATOM 4 OP2 C A2515 32.190 134.541 135.175 1.00 61.27 O
ATOM 5 O5' C A2515 32.408 133.646 132.847 1.00 61.19 O
ATOM 6 C5' C A2515 33.721 134.207 132.828 1.00 60.69 C
ATOM 7 C4' C A2515 33.954 134.893 131.510 1.00 61.78 C
ATOM 8 O4' C A2515 33.333 136.207 131.528 1.00 61.82 O
ATOM 9 C3' C A2515 35.403 135.190 131.196 1.00 62.37 C
ATOM 10 O3' C A2515 36.062 134.050 130.682 1.00 61.14 O
ATOM 11 C2' C A2515 35.290 136.325 130.192 1.00 62.14 C
ATOM 12 O2' C A2515 34.931 135.889 128.899 1.00 63.37 O
ATOM 13 C1' C A2515 34.143 137.130 130.805 1.00 60.71 C
ATOM 14 N1 C A2515 34.662 138.135 131.748 1.00 58.26 N
ATOM 15 C2 C A2515 35.421 139.195 131.251 1.00 57.14 C
ATOM 16 O2 C A2515 35.615 139.274 130.035 1.00 55.31 O
ATOM 17 N3 C A2515 35.924 140.104 132.108 1.00 58.34 N
ATOM 18 C4 C A2515 35.694 139.987 133.417 1.00 59.15 C
ATOM 19 N4 C A2515 36.221 140.902 134.229 1.00 58.84 N
ATOM 20 C5 C A2515 34.916 138.924 133.952 1.00 59.38 C
ATOM 21 C6 C A2515 34.422 138.030 133.090 1.00 59.16 C
ATOM 22 P A A2516 37.570 133.764 131.121 1.00 60.99 P
ATOM 23 OP1 A A2516 37.937 132.451 130.541 1.00 61.88 O
ATOM 24 OP2 A A2516 37.679 133.981 132.584 1.00 59.71 O
ATOM 25 O5' A A2516 38.384 134.916 130.388 1.00 57.71 O
TER
ATOM 1 O3' G B2513 30.572 140.090 136.165 1.00 54.56 O
ATOM 2 P A B2514 31.377 138.815 136.718 1.00 57.21 P
ATOM 3 OP1 A B2514 30.763 138.394 138.004 1.00 57.75 O
ATOM 4 OP2 A B2514 32.830 139.136 136.662 1.00 56.45 O
ATOM 5 O5' A B2514 31.067 137.670 135.661 1.00 56.07 O
ATOM 6 C5' A B2514 29.766 137.083 135.587 1.00 54.30 C
ATOM 7 C4' A B2514 29.405 136.830 134.152 1.00 54.68 C
ATOM 8 O4' A B2514 29.332 138.089 133.448 1.00 53.14 O
ATOM 9 C3' A B2514 30.431 136.042 133.364 1.00 54.28 C
ATOM 10 O3' A B2514 30.245 134.659 133.594 1.00 58.33 O
ATOM 11 C2' A B2514 30.097 136.423 131.932 1.00 51.98 C
ATOM 12 O2' A B2514 28.972 135.718 131.459 1.00 49.96 O
ATOM 13 C1' A B2514 29.705 137.891 132.100 1.00 51.21 C
ATOM 14 N9 A B2514 30.729 138.873 131.757 1.00 49.82 N
ATOM 15 C8 A B2514 31.483 139.650 132.603 1.00 49.12 C
ATOM 16 N7 A B2514 32.267 140.496 131.983 1.00 48.88 N
ATOM 17 C5 A B2514 32.024 140.248 130.639 1.00 49.11 C
ATOM 18 C6 A B2514 32.529 140.829 129.468 1.00 49.51 C
ATOM 19 N6 A B2514 33.405 141.835 129.466 1.00 51.28 N
ATOM 20 N1 A B2514 32.090 140.344 128.283 1.00 48.69 N
ATOM 21 C2 A B2514 31.195 139.352 128.292 1.00 48.19 C
ATOM 22 N3 A B2514 30.635 138.735 129.327 1.00 47.72 N
ATOM 23 C4 A B2514 31.097 139.237 130.486 1.00 49.01 C
ATOM 24 P C B2515 31.469 133.773 134.123 1.00 61.44 P
ATOM 25 OP1 C B2515 30.907 132.425 134.435 1.00 59.78 O
ATOM 26 OP2 C B2515 32.190 134.541 135.175 1.00 61.27 O
ATOM 27 O5' C B2515 32.408 133.646 132.847 1.00 61.19 O
TER
Atoms:
C2: (35.421,139.195,131.251)
OP1: (30.907,132.425,134.435)
OP2: (32.190,134.541,135.175)
C4: (35.694,139.987,133.417)
O5': (32.408,133.646,132.847)
C3': (35.403,135.190,131.196)
C1': (34.143,137.130,130.805)
O4': (33.333,136.207,131.528)
C5': (33.721,134.207,132.828)
P: (31.469,133.773,134.123)
O2: (35.615,139.274,130.035)
C4': (33.954,134.893,131.510)
C2': (35.290,136.325,130.192)
O2': (34.931,135.889,128.899)
N1: (34.662,138.135,131.748)
N3: (35.924,140.104,132.108)
N4: (36.221,140.902,134.229)
C6: (34.422,138.030,133.090)
C5: (34.916,138.924,133.952)
O3': (36.062,134.050,130.682)
OP1: (30.907,132.425,134.435)
OP2: (32.190,134.541,135.175)
C4: (35.694,139.987,133.417)
O5': (32.408,133.646,132.847)
C3': (35.403,135.190,131.196)
C1': (34.143,137.130,130.805)
O4': (33.333,136.207,131.528)
C5': (33.721,134.207,132.828)
P: (31.469,133.773,134.123)
O2: (35.615,139.274,130.035)
C4': (33.954,134.893,131.510)
C2': (35.290,136.325,130.192)
O2': (34.931,135.889,128.899)
N1: (34.662,138.135,131.748)
N3: (35.924,140.104,132.108)
N4: (36.221,140.902,134.229)
C6: (34.422,138.030,133.090)
C5: (34.916,138.924,133.952)
O3': (36.062,134.050,130.682)
OP1: (30.763,138.394,138.004)
OP2: (32.830,139.136,136.662)
C3': (30.431,136.042,133.364)
C1': (29.705,137.891,132.100)
C5': (29.766,137.083,135.587)
O4': (29.332,138.089,133.448)
C8: (31.483,139.650,132.603)
O2': (28.972,135.718,131.459)
C6: (32.529,140.829,129.468)
C5: (32.024,140.248,130.639)
C4: (31.097,139.237,130.486)
P: (31.377,138.815,136.718)
C4': (29.405,136.830,134.152)
C2': (30.097,136.423,131.932)
C2: (31.195,139.352,128.292)
N1: (32.090,140.344,128.283)
N3: (30.635,138.735,129.327)
N6: (33.405,141.835,129.466)
N7: (32.267,140.496,131.983)
N9: (30.729,138.873,131.757)
O5': (31.067,137.670,135.661)
O3': (30.245,134.659,133.594)
OP2: (32.830,139.136,136.662)
C3': (30.431,136.042,133.364)
C1': (29.705,137.891,132.100)
C5': (29.766,137.083,135.587)
O4': (29.332,138.089,133.448)
C8: (31.483,139.650,132.603)
O2': (28.972,135.718,131.459)
C6: (32.529,140.829,129.468)
C5: (32.024,140.248,130.639)
C4: (31.097,139.237,130.486)
P: (31.377,138.815,136.718)
C4': (29.405,136.830,134.152)
C2': (30.097,136.423,131.932)
C2: (31.195,139.352,128.292)
N1: (32.090,140.344,128.283)
N3: (30.635,138.735,129.327)
N6: (33.405,141.835,129.466)
N7: (32.267,140.496,131.983)
N9: (30.729,138.873,131.757)
O5': (31.067,137.670,135.661)
O3': (30.245,134.659,133.594)
Image (generated by PyMOL):