Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1167:A1166
Extra
PDB:
ATOM 1 O3' A A1166 54.604 79.466 173.679 1.00 93.33 O
ATOM 2 P C A1167 53.090 78.969 173.844 1.00 91.41 P
ATOM 3 OP1 C A1167 52.710 78.183 172.646 1.00 92.23 O
ATOM 4 OP2 C A1167 52.286 80.166 174.218 1.00 91.11 O
ATOM 5 O5' C A1167 53.157 77.979 175.085 1.00 91.50 O
ATOM 6 C5' C A1167 52.271 78.150 176.179 1.00 91.07 C
ATOM 7 C4' C A1167 52.944 77.755 177.457 1.00 89.54 C
ATOM 8 O4' C A1167 54.042 78.659 177.764 1.00 89.59 O
ATOM 9 C3' C A1167 52.010 77.913 178.628 1.00 88.80 C
ATOM 10 O3' C A1167 51.124 76.824 178.702 1.00 85.64 O
ATOM 11 C2' C A1167 52.978 78.056 179.778 1.00 89.61 C
ATOM 12 O2' C A1167 53.571 76.805 180.060 1.00 89.59 O
ATOM 13 C1' C A1167 54.010 78.999 179.146 1.00 90.32 C
ATOM 14 N1 C A1167 53.682 80.454 179.262 1.00 91.76 N
ATOM 15 C2 C A1167 53.563 81.050 180.542 1.00 92.38 C
ATOM 16 O2 C A1167 53.736 80.357 181.552 1.00 93.07 O
ATOM 17 N3 C A1167 53.261 82.373 180.635 1.00 92.42 N
ATOM 18 C4 C A1167 53.075 83.097 179.529 1.00 92.33 C
ATOM 19 N4 C A1167 52.759 84.387 179.672 1.00 92.14 N
ATOM 20 C5 C A1167 53.198 82.527 178.225 1.00 92.44 C
ATOM 21 C6 C A1167 53.495 81.218 178.139 1.00 92.08 C
ATOM 22 P C A1168 49.572 77.085 178.454 1.00 83.70 P
ATOM 23 OP1 C A1168 48.978 75.789 178.056 1.00 83.54 O
ATOM 24 OP2 C A1168 49.458 78.248 177.537 1.00 83.73 O
ATOM 25 O5' C A1168 49.043 77.559 179.885 1.00 83.90 O
TER
ATOM 1 O3' U B1165 54.498 86.452 174.615 1.00112.76 O
ATOM 2 P A B1166 53.649 85.087 174.825 1.00110.52 P
ATOM 3 OP1 A B1166 52.219 85.258 174.382 1.00111.10 O
ATOM 4 OP2 A B1166 53.951 84.615 176.172 1.00110.48 O
ATOM 5 O5' A B1166 54.215 83.998 173.809 1.00107.12 O
ATOM 6 C5' A B1166 53.955 82.597 174.055 1.00102.55 C
ATOM 7 C4' A B1166 55.242 81.804 173.996 1.00 98.68 C
ATOM 8 O4' A B1166 56.272 82.454 174.789 1.00 97.74 O
ATOM 9 C3' A B1166 55.126 80.413 174.591 1.00 96.13 C
ATOM 10 O3' A B1166 54.604 79.466 173.679 1.00 93.33 O
ATOM 11 C2' A B1166 56.552 80.098 175.000 1.00 95.53 C
ATOM 12 O2' A B1166 57.361 79.572 173.976 1.00 94.97 O
ATOM 13 C1' A B1166 57.056 81.472 175.448 1.00 96.34 C
ATOM 14 N9 A B1166 56.988 81.710 176.896 1.00 96.17 N
ATOM 15 C8 A B1166 56.367 82.751 177.544 1.00 96.31 C
ATOM 16 N7 A B1166 56.517 82.733 178.846 1.00 96.07 N
ATOM 17 C5 A B1166 57.276 81.597 179.079 1.00 96.16 C
ATOM 18 C6 A B1166 57.782 81.023 180.266 1.00 96.28 C
ATOM 19 N6 A B1166 57.589 81.539 181.485 1.00 96.09 N
ATOM 20 N1 A B1166 58.504 79.888 180.156 1.00 96.37 N
ATOM 21 C2 A B1166 58.695 79.366 178.935 1.00 96.50 C
ATOM 22 N3 A B1166 58.272 79.813 177.746 1.00 96.16 N
ATOM 23 C4 A B1166 57.564 80.946 177.890 1.00 96.10 C
ATOM 24 P C B1167 53.090 78.969 173.844 1.00 91.41 P
ATOM 25 OP1 C B1167 52.710 78.183 172.646 1.00 92.23 O
ATOM 26 OP2 C B1167 52.286 80.166 174.218 1.00 91.11 O
ATOM 27 O5' C B1167 53.157 77.979 175.085 1.00 91.50 O
TER
ATOM 2 P C A1167 53.090 78.969 173.844 1.00 91.41 P
ATOM 3 OP1 C A1167 52.710 78.183 172.646 1.00 92.23 O
ATOM 4 OP2 C A1167 52.286 80.166 174.218 1.00 91.11 O
ATOM 5 O5' C A1167 53.157 77.979 175.085 1.00 91.50 O
ATOM 6 C5' C A1167 52.271 78.150 176.179 1.00 91.07 C
ATOM 7 C4' C A1167 52.944 77.755 177.457 1.00 89.54 C
ATOM 8 O4' C A1167 54.042 78.659 177.764 1.00 89.59 O
ATOM 9 C3' C A1167 52.010 77.913 178.628 1.00 88.80 C
ATOM 10 O3' C A1167 51.124 76.824 178.702 1.00 85.64 O
ATOM 11 C2' C A1167 52.978 78.056 179.778 1.00 89.61 C
ATOM 12 O2' C A1167 53.571 76.805 180.060 1.00 89.59 O
ATOM 13 C1' C A1167 54.010 78.999 179.146 1.00 90.32 C
ATOM 14 N1 C A1167 53.682 80.454 179.262 1.00 91.76 N
ATOM 15 C2 C A1167 53.563 81.050 180.542 1.00 92.38 C
ATOM 16 O2 C A1167 53.736 80.357 181.552 1.00 93.07 O
ATOM 17 N3 C A1167 53.261 82.373 180.635 1.00 92.42 N
ATOM 18 C4 C A1167 53.075 83.097 179.529 1.00 92.33 C
ATOM 19 N4 C A1167 52.759 84.387 179.672 1.00 92.14 N
ATOM 20 C5 C A1167 53.198 82.527 178.225 1.00 92.44 C
ATOM 21 C6 C A1167 53.495 81.218 178.139 1.00 92.08 C
ATOM 22 P C A1168 49.572 77.085 178.454 1.00 83.70 P
ATOM 23 OP1 C A1168 48.978 75.789 178.056 1.00 83.54 O
ATOM 24 OP2 C A1168 49.458 78.248 177.537 1.00 83.73 O
ATOM 25 O5' C A1168 49.043 77.559 179.885 1.00 83.90 O
TER
ATOM 1 O3' U B1165 54.498 86.452 174.615 1.00112.76 O
ATOM 2 P A B1166 53.649 85.087 174.825 1.00110.52 P
ATOM 3 OP1 A B1166 52.219 85.258 174.382 1.00111.10 O
ATOM 4 OP2 A B1166 53.951 84.615 176.172 1.00110.48 O
ATOM 5 O5' A B1166 54.215 83.998 173.809 1.00107.12 O
ATOM 6 C5' A B1166 53.955 82.597 174.055 1.00102.55 C
ATOM 7 C4' A B1166 55.242 81.804 173.996 1.00 98.68 C
ATOM 8 O4' A B1166 56.272 82.454 174.789 1.00 97.74 O
ATOM 9 C3' A B1166 55.126 80.413 174.591 1.00 96.13 C
ATOM 10 O3' A B1166 54.604 79.466 173.679 1.00 93.33 O
ATOM 11 C2' A B1166 56.552 80.098 175.000 1.00 95.53 C
ATOM 12 O2' A B1166 57.361 79.572 173.976 1.00 94.97 O
ATOM 13 C1' A B1166 57.056 81.472 175.448 1.00 96.34 C
ATOM 14 N9 A B1166 56.988 81.710 176.896 1.00 96.17 N
ATOM 15 C8 A B1166 56.367 82.751 177.544 1.00 96.31 C
ATOM 16 N7 A B1166 56.517 82.733 178.846 1.00 96.07 N
ATOM 17 C5 A B1166 57.276 81.597 179.079 1.00 96.16 C
ATOM 18 C6 A B1166 57.782 81.023 180.266 1.00 96.28 C
ATOM 19 N6 A B1166 57.589 81.539 181.485 1.00 96.09 N
ATOM 20 N1 A B1166 58.504 79.888 180.156 1.00 96.37 N
ATOM 21 C2 A B1166 58.695 79.366 178.935 1.00 96.50 C
ATOM 22 N3 A B1166 58.272 79.813 177.746 1.00 96.16 N
ATOM 23 C4 A B1166 57.564 80.946 177.890 1.00 96.10 C
ATOM 24 P C B1167 53.090 78.969 173.844 1.00 91.41 P
ATOM 25 OP1 C B1167 52.710 78.183 172.646 1.00 92.23 O
ATOM 26 OP2 C B1167 52.286 80.166 174.218 1.00 91.11 O
ATOM 27 O5' C B1167 53.157 77.979 175.085 1.00 91.50 O
TER
Atoms:
C2: (53.563,81.050,180.542)
OP1: (52.710,78.183,172.646)
OP2: (52.286,80.166,174.218)
C4: (53.075,83.097,179.529)
O5': (53.157,77.979,175.085)
C3': (52.010,77.913,178.628)
C1': (54.010,78.999,179.146)
O4': (54.042,78.659,177.764)
C5': (52.271,78.150,176.179)
P: (53.090,78.969,173.844)
O2: (53.736,80.357,181.552)
C4': (52.944,77.755,177.457)
C2': (52.978,78.056,179.778)
O2': (53.571,76.805,180.060)
N1: (53.682,80.454,179.262)
N3: (53.261,82.373,180.635)
N4: (52.759,84.387,179.672)
C6: (53.495,81.218,178.139)
C5: (53.198,82.527,178.225)
O3': (51.124,76.824,178.702)
OP1: (52.710,78.183,172.646)
OP2: (52.286,80.166,174.218)
C4: (53.075,83.097,179.529)
O5': (53.157,77.979,175.085)
C3': (52.010,77.913,178.628)
C1': (54.010,78.999,179.146)
O4': (54.042,78.659,177.764)
C5': (52.271,78.150,176.179)
P: (53.090,78.969,173.844)
O2: (53.736,80.357,181.552)
C4': (52.944,77.755,177.457)
C2': (52.978,78.056,179.778)
O2': (53.571,76.805,180.060)
N1: (53.682,80.454,179.262)
N3: (53.261,82.373,180.635)
N4: (52.759,84.387,179.672)
C6: (53.495,81.218,178.139)
C5: (53.198,82.527,178.225)
O3': (51.124,76.824,178.702)
OP1: (52.219,85.258,174.382)
OP2: (53.951,84.615,176.172)
C3': (55.126,80.413,174.591)
C1': (57.056,81.472,175.448)
C5': (53.955,82.597,174.055)
O4': (56.272,82.454,174.789)
C8: (56.367,82.751,177.544)
O2': (57.361,79.572,173.976)
C6: (57.782,81.023,180.266)
C5: (57.276,81.597,179.079)
C4: (57.564,80.946,177.890)
P: (53.649,85.087,174.825)
C4': (55.242,81.804,173.996)
C2': (56.552,80.098,175.000)
C2: (58.695,79.366,178.935)
N1: (58.504,79.888,180.156)
N3: (58.272,79.813,177.746)
N6: (57.589,81.539,181.485)
N7: (56.517,82.733,178.846)
N9: (56.988,81.710,176.896)
O5': (54.215,83.998,173.809)
O3': (54.604,79.466,173.679)
OP2: (53.951,84.615,176.172)
C3': (55.126,80.413,174.591)
C1': (57.056,81.472,175.448)
C5': (53.955,82.597,174.055)
O4': (56.272,82.454,174.789)
C8: (56.367,82.751,177.544)
O2': (57.361,79.572,173.976)
C6: (57.782,81.023,180.266)
C5: (57.276,81.597,179.079)
C4: (57.564,80.946,177.890)
P: (53.649,85.087,174.825)
C4': (55.242,81.804,173.996)
C2': (56.552,80.098,175.000)
C2: (58.695,79.366,178.935)
N1: (58.504,79.888,180.156)
N3: (58.272,79.813,177.746)
N6: (57.589,81.539,181.485)
N7: (56.517,82.733,178.846)
N9: (56.988,81.710,176.896)
O5': (54.215,83.998,173.809)
O3': (54.604,79.466,173.679)
Image (generated by PyMOL):