Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A2040:A2039
Extra
PDB:
ATOM 1 O3' A A2039 57.401 -10.903 -66.621 1.00 54.97 O
ATOM 2 P C A2040 56.164 -11.483 -65.789 1.00 57.71 P
ATOM 3 OP1 C A2040 55.401 -12.338 -66.706 1.00 61.90 O
ATOM 4 OP2 C A2040 55.481 -10.337 -65.101 1.00 36.87 O
ATOM 5 O5' C A2040 56.886 -12.360 -64.699 1.00 77.58 O
ATOM 6 C5' C A2040 56.708 -12.063 -63.333 1.00 64.34 C
ATOM 7 C4' C A2040 58.011 -11.868 -62.622 1.00 41.85 C
ATOM 8 O4' C A2040 58.786 -10.846 -63.284 1.00 40.88 O
ATOM 9 C3' C A2040 57.866 -11.363 -61.207 1.00 54.61 C
ATOM 10 O3' C A2040 57.581 -12.394 -60.305 1.00 54.00 O
ATOM 11 C2' C A2040 59.168 -10.649 -60.963 1.00 50.60 C
ATOM 12 O2' C A2040 60.219 -11.582 -60.764 1.00 60.80 O
ATOM 13 C1' C A2040 59.356 -9.986 -62.325 1.00 51.37 C
ATOM 14 N1 C A2040 58.642 -8.715 -62.404 1.00 49.26 N
ATOM 15 C2 C A2040 58.779 -7.754 -61.419 1.00 50.04 C
ATOM 16 O2 C A2040 59.519 -7.966 -60.475 1.00 52.91 O
ATOM 17 N3 C A2040 58.108 -6.601 -61.510 1.00 54.14 N
ATOM 18 C4 C A2040 57.313 -6.398 -62.548 1.00 56.24 C
ATOM 19 N4 C A2040 56.674 -5.228 -62.594 1.00 57.48 N
ATOM 20 C5 C A2040 57.140 -7.378 -63.572 1.00 54.66 C
ATOM 21 C6 C A2040 57.814 -8.519 -63.461 1.00 51.52 C
ATOM 22 P C A2041 56.051 -12.805 -60.040 1.00 42.51 P
ATOM 23 OP1 C A2041 55.922 -14.249 -60.354 1.00 45.10 O
ATOM 24 OP2 C A2041 55.189 -11.841 -60.758 1.00 44.04 O
ATOM 25 O5' C A2041 55.952 -12.560 -58.491 1.00 47.62 O
TER
ATOM 1 O3' A B2038 55.397 -4.822 -67.454 1.00 51.21 O
ATOM 2 P A B2039 54.815 -5.973 -66.492 1.00 55.37 P
ATOM 3 OP1 A B2039 53.379 -5.699 -66.247 1.00 66.43 O
ATOM 4 OP2 A B2039 55.714 -6.076 -65.335 1.00 59.25 O
ATOM 5 O5' A B2039 54.974 -7.239 -67.415 1.00 47.05 O
ATOM 6 C5' A B2039 55.501 -8.422 -66.900 1.00 52.35 C
ATOM 7 C4' A B2039 56.882 -8.698 -67.416 1.00 50.01 C
ATOM 8 O4' A B2039 57.638 -7.473 -67.549 1.00 49.63 O
ATOM 9 C3' A B2039 57.723 -9.547 -66.505 1.00 54.45 C
ATOM 10 O3' A B2039 57.401 -10.903 -66.621 1.00 54.97 O
ATOM 11 C2' A B2039 59.137 -9.201 -66.913 1.00 45.62 C
ATOM 12 O2' A B2039 59.474 -9.876 -68.107 1.00 48.54 O
ATOM 13 C1' A B2039 58.989 -7.709 -67.210 1.00 44.55 C
ATOM 14 N9 A B2039 59.316 -6.870 -66.044 1.00 49.65 N
ATOM 15 C8 A B2039 58.711 -5.676 -65.724 1.00 51.26 C
ATOM 16 N7 A B2039 59.171 -5.090 -64.641 1.00 49.20 N
ATOM 17 C5 A B2039 60.163 -5.962 -64.220 1.00 49.76 C
ATOM 18 C6 A B2039 61.029 -5.906 -63.134 1.00 46.83 C
ATOM 19 N6 A B2039 61.049 -4.913 -62.257 1.00 51.31 N
ATOM 20 N1 A B2039 61.882 -6.914 -62.973 1.00 46.48 N
ATOM 21 C2 A B2039 61.856 -7.904 -63.858 1.00 50.79 C
ATOM 22 N3 A B2039 61.099 -8.082 -64.930 1.00 48.03 N
ATOM 23 C4 A B2039 60.261 -7.059 -65.064 1.00 48.98 C
ATOM 24 P C B2040 56.164 -11.483 -65.789 1.00 57.71 P
ATOM 25 OP1 C B2040 55.401 -12.338 -66.706 1.00 61.90 O
ATOM 26 OP2 C B2040 55.481 -10.337 -65.101 1.00 36.87 O
ATOM 27 O5' C B2040 56.886 -12.360 -64.699 1.00 77.58 O
TER
ATOM 2 P C A2040 56.164 -11.483 -65.789 1.00 57.71 P
ATOM 3 OP1 C A2040 55.401 -12.338 -66.706 1.00 61.90 O
ATOM 4 OP2 C A2040 55.481 -10.337 -65.101 1.00 36.87 O
ATOM 5 O5' C A2040 56.886 -12.360 -64.699 1.00 77.58 O
ATOM 6 C5' C A2040 56.708 -12.063 -63.333 1.00 64.34 C
ATOM 7 C4' C A2040 58.011 -11.868 -62.622 1.00 41.85 C
ATOM 8 O4' C A2040 58.786 -10.846 -63.284 1.00 40.88 O
ATOM 9 C3' C A2040 57.866 -11.363 -61.207 1.00 54.61 C
ATOM 10 O3' C A2040 57.581 -12.394 -60.305 1.00 54.00 O
ATOM 11 C2' C A2040 59.168 -10.649 -60.963 1.00 50.60 C
ATOM 12 O2' C A2040 60.219 -11.582 -60.764 1.00 60.80 O
ATOM 13 C1' C A2040 59.356 -9.986 -62.325 1.00 51.37 C
ATOM 14 N1 C A2040 58.642 -8.715 -62.404 1.00 49.26 N
ATOM 15 C2 C A2040 58.779 -7.754 -61.419 1.00 50.04 C
ATOM 16 O2 C A2040 59.519 -7.966 -60.475 1.00 52.91 O
ATOM 17 N3 C A2040 58.108 -6.601 -61.510 1.00 54.14 N
ATOM 18 C4 C A2040 57.313 -6.398 -62.548 1.00 56.24 C
ATOM 19 N4 C A2040 56.674 -5.228 -62.594 1.00 57.48 N
ATOM 20 C5 C A2040 57.140 -7.378 -63.572 1.00 54.66 C
ATOM 21 C6 C A2040 57.814 -8.519 -63.461 1.00 51.52 C
ATOM 22 P C A2041 56.051 -12.805 -60.040 1.00 42.51 P
ATOM 23 OP1 C A2041 55.922 -14.249 -60.354 1.00 45.10 O
ATOM 24 OP2 C A2041 55.189 -11.841 -60.758 1.00 44.04 O
ATOM 25 O5' C A2041 55.952 -12.560 -58.491 1.00 47.62 O
TER
ATOM 1 O3' A B2038 55.397 -4.822 -67.454 1.00 51.21 O
ATOM 2 P A B2039 54.815 -5.973 -66.492 1.00 55.37 P
ATOM 3 OP1 A B2039 53.379 -5.699 -66.247 1.00 66.43 O
ATOM 4 OP2 A B2039 55.714 -6.076 -65.335 1.00 59.25 O
ATOM 5 O5' A B2039 54.974 -7.239 -67.415 1.00 47.05 O
ATOM 6 C5' A B2039 55.501 -8.422 -66.900 1.00 52.35 C
ATOM 7 C4' A B2039 56.882 -8.698 -67.416 1.00 50.01 C
ATOM 8 O4' A B2039 57.638 -7.473 -67.549 1.00 49.63 O
ATOM 9 C3' A B2039 57.723 -9.547 -66.505 1.00 54.45 C
ATOM 10 O3' A B2039 57.401 -10.903 -66.621 1.00 54.97 O
ATOM 11 C2' A B2039 59.137 -9.201 -66.913 1.00 45.62 C
ATOM 12 O2' A B2039 59.474 -9.876 -68.107 1.00 48.54 O
ATOM 13 C1' A B2039 58.989 -7.709 -67.210 1.00 44.55 C
ATOM 14 N9 A B2039 59.316 -6.870 -66.044 1.00 49.65 N
ATOM 15 C8 A B2039 58.711 -5.676 -65.724 1.00 51.26 C
ATOM 16 N7 A B2039 59.171 -5.090 -64.641 1.00 49.20 N
ATOM 17 C5 A B2039 60.163 -5.962 -64.220 1.00 49.76 C
ATOM 18 C6 A B2039 61.029 -5.906 -63.134 1.00 46.83 C
ATOM 19 N6 A B2039 61.049 -4.913 -62.257 1.00 51.31 N
ATOM 20 N1 A B2039 61.882 -6.914 -62.973 1.00 46.48 N
ATOM 21 C2 A B2039 61.856 -7.904 -63.858 1.00 50.79 C
ATOM 22 N3 A B2039 61.099 -8.082 -64.930 1.00 48.03 N
ATOM 23 C4 A B2039 60.261 -7.059 -65.064 1.00 48.98 C
ATOM 24 P C B2040 56.164 -11.483 -65.789 1.00 57.71 P
ATOM 25 OP1 C B2040 55.401 -12.338 -66.706 1.00 61.90 O
ATOM 26 OP2 C B2040 55.481 -10.337 -65.101 1.00 36.87 O
ATOM 27 O5' C B2040 56.886 -12.360 -64.699 1.00 77.58 O
TER
Atoms:
C2: (58.779,-7.754,-61.419)
OP1: (55.401,-12.338,-66.706)
OP2: (55.481,-10.337,-65.101)
C4: (57.313,-6.398,-62.548)
O5': (56.886,-12.360,-64.699)
C3': (57.866,-11.363,-61.207)
C1': (59.356,-9.986,-62.325)
O4': (58.786,-10.846,-63.284)
C5': (56.708,-12.063,-63.333)
P: (56.164,-11.483,-65.789)
O2: (59.519,-7.966,-60.475)
C4': (58.011,-11.868,-62.622)
C2': (59.168,-10.649,-60.963)
O2': (60.219,-11.582,-60.764)
N1: (58.642,-8.715,-62.404)
N3: (58.108,-6.601,-61.510)
N4: (56.674,-5.228,-62.594)
C6: (57.814,-8.519,-63.461)
C5: (57.140,-7.378,-63.572)
O3': (57.581,-12.394,-60.305)
OP1: (55.401,-12.338,-66.706)
OP2: (55.481,-10.337,-65.101)
C4: (57.313,-6.398,-62.548)
O5': (56.886,-12.360,-64.699)
C3': (57.866,-11.363,-61.207)
C1': (59.356,-9.986,-62.325)
O4': (58.786,-10.846,-63.284)
C5': (56.708,-12.063,-63.333)
P: (56.164,-11.483,-65.789)
O2: (59.519,-7.966,-60.475)
C4': (58.011,-11.868,-62.622)
C2': (59.168,-10.649,-60.963)
O2': (60.219,-11.582,-60.764)
N1: (58.642,-8.715,-62.404)
N3: (58.108,-6.601,-61.510)
N4: (56.674,-5.228,-62.594)
C6: (57.814,-8.519,-63.461)
C5: (57.140,-7.378,-63.572)
O3': (57.581,-12.394,-60.305)
OP1: (53.379,-5.699,-66.247)
OP2: (55.714,-6.076,-65.335)
C3': (57.723,-9.547,-66.505)
C1': (58.989,-7.709,-67.210)
C5': (55.501,-8.422,-66.900)
O4': (57.638,-7.473,-67.549)
C8: (58.711,-5.676,-65.724)
O2': (59.474,-9.876,-68.107)
C6: (61.029,-5.906,-63.134)
C5: (60.163,-5.962,-64.220)
C4: (60.261,-7.059,-65.064)
P: (54.815,-5.973,-66.492)
C4': (56.882,-8.698,-67.416)
C2': (59.137,-9.201,-66.913)
C2: (61.856,-7.904,-63.858)
N1: (61.882,-6.914,-62.973)
N3: (61.099,-8.082,-64.930)
N6: (61.049,-4.913,-62.257)
N7: (59.171,-5.090,-64.641)
N9: (59.316,-6.870,-66.044)
O5': (54.974,-7.239,-67.415)
O3': (57.401,-10.903,-66.621)
OP2: (55.714,-6.076,-65.335)
C3': (57.723,-9.547,-66.505)
C1': (58.989,-7.709,-67.210)
C5': (55.501,-8.422,-66.900)
O4': (57.638,-7.473,-67.549)
C8: (58.711,-5.676,-65.724)
O2': (59.474,-9.876,-68.107)
C6: (61.029,-5.906,-63.134)
C5: (60.163,-5.962,-64.220)
C4: (60.261,-7.059,-65.064)
P: (54.815,-5.973,-66.492)
C4': (56.882,-8.698,-67.416)
C2': (59.137,-9.201,-66.913)
C2: (61.856,-7.904,-63.858)
N1: (61.882,-6.914,-62.973)
N3: (61.099,-8.082,-64.930)
N6: (61.049,-4.913,-62.257)
N7: (59.171,-5.090,-64.641)
N9: (59.316,-6.870,-66.044)
O5': (54.974,-7.239,-67.415)
O3': (57.401,-10.903,-66.621)
Image (generated by PyMOL):