ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CPW:0232:0231

Extra

PDB:
ATOM 1 O3' A A 231 93.018 103.167 -1.509 1.00 66.32 O
ATOM 2 P C A 232 93.793 104.158 -2.503 1.00 68.58 P
ATOM 3 OP1 C A 232 95.015 103.444 -2.972 1.00 66.33 O
ATOM 4 OP2 C A 232 93.919 105.483 -1.838 1.00 67.71 O
ATOM 5 O5' C A 232 92.788 104.350 -3.719 1.00 68.44 O
ATOM 6 C5' C A 232 92.359 103.236 -4.524 1.00 68.74 C
ATOM 7 C4' C A 232 91.296 103.693 -5.488 1.00 69.01 C
ATOM 8 O4' C A 232 90.063 103.958 -4.761 1.00 68.88 O
ATOM 9 C3' C A 232 91.636 105.015 -6.153 1.00 69.64 C
ATOM 10 O3' C A 232 92.490 104.863 -7.275 1.00 71.13 O
ATOM 11 C2' C A 232 90.267 105.604 -6.469 1.00 68.69 C
ATOM 12 O2' C A 232 89.697 105.095 -7.656 1.00 69.37 O
ATOM 13 C1' C A 232 89.450 105.135 -5.264 1.00 67.33 C
ATOM 14 N1 C A 232 89.419 106.142 -4.185 1.00 65.65 N
ATOM 15 C2 C A 232 88.392 107.086 -4.177 1.00 65.24 C
ATOM 16 O2 C A 232 87.517 107.028 -5.049 1.00 65.90 O
ATOM 17 N3 C A 232 88.372 108.037 -3.214 1.00 65.04 N
ATOM 18 C4 C A 232 89.322 108.057 -2.277 1.00 64.91 C
ATOM 19 N4 C A 232 89.263 109.014 -1.352 1.00 64.08 N
ATOM 20 C5 C A 232 90.376 107.096 -2.250 1.00 64.23 C
ATOM 21 C6 C A 232 90.385 106.167 -3.213 1.00 65.46 C
ATOM 22 P C A 233 93.400 106.104 -7.745 1.00 72.47 P
ATOM 23 OP1 C A 233 94.153 105.670 -8.956 1.00 73.02 O
ATOM 24 OP2 C A 233 94.149 106.634 -6.578 1.00 72.13 O
ATOM 25 O5' C A 233 92.306 107.182 -8.159 1.00 69.16 O
TER

ATOM 1 O3' A B 230 92.272 106.868 3.348 1.00 58.13 O
ATOM 2 P A B 231 92.482 107.247 1.793 1.00 59.20 P
ATOM 3 OP1 A B 231 93.938 107.532 1.604 1.00 58.79 O
ATOM 4 OP2 A B 231 91.474 108.271 1.398 1.00 55.27 O
ATOM 5 O5' A B 231 92.125 105.900 1.025 1.00 56.89 O
ATOM 6 C5' A B 231 92.798 104.670 1.341 1.00 59.36 C
ATOM 7 C4' A B 231 92.085 103.507 0.692 1.00 62.17 C
ATOM 8 O4' A B 231 90.750 103.383 1.243 1.00 61.93 O
ATOM 9 C3' A B 231 91.871 103.628 -0.809 1.00 63.23 C
ATOM 10 O3' A B 231 93.018 103.167 -1.509 1.00 66.32 O
ATOM 11 C2' A B 231 90.657 102.738 -1.056 1.00 61.87 C
ATOM 12 O2' A B 231 90.989 101.372 -1.218 1.00 62.06 O
ATOM 13 C1' A B 231 89.867 102.915 0.243 1.00 60.99 C
ATOM 14 N9 A B 231 88.760 103.858 0.116 1.00 60.27 N
ATOM 15 C8 A B 231 88.800 105.222 -0.058 1.00 60.13 C
ATOM 16 N7 A B 231 87.616 105.772 -0.197 1.00 58.80 N
ATOM 17 C5 A B 231 86.738 104.701 -0.094 1.00 59.50 C
ATOM 18 C6 A B 231 85.336 104.613 -0.168 1.00 60.14 C
ATOM 19 N6 A B 231 84.535 105.660 -0.386 1.00 60.72 N
ATOM 20 N1 A B 231 84.776 103.391 -0.015 1.00 58.97 N
ATOM 21 C2 A B 231 85.577 102.338 0.191 1.00 57.88 C
ATOM 22 N3 A B 231 86.904 102.292 0.273 1.00 57.73 N
ATOM 23 C4 A B 231 87.430 103.519 0.118 1.00 59.59 C
ATOM 24 P C B 232 93.793 104.158 -2.503 1.00 68.58 P
ATOM 25 OP1 C B 232 95.015 103.444 -2.972 1.00 66.33 O
ATOM 26 OP2 C B 232 93.919 105.483 -1.838 1.00 67.71 O
ATOM 27 O5' C B 232 92.788 104.350 -3.719 1.00 68.44 O
TER

Atoms:
C2: (88.392,107.086,-4.177)
OP1: (95.015,103.444,-2.972)
OP2: (93.919,105.483,-1.838)
C4: (89.322,108.057,-2.277)
O5': (92.788,104.350,-3.719)
C3': (91.636,105.015,-6.153)
C1': (89.450,105.135,-5.264)
O4': (90.063,103.958,-4.761)
C5': (92.359,103.236,-4.524)
P: (93.793,104.158,-2.503)
O2: (87.517,107.028,-5.049)
C4': (91.296,103.693,-5.488)
C2': (90.267,105.604,-6.469)
O2': (89.697,105.095,-7.656)
N1: (89.419,106.142,-4.185)
N3: (88.372,108.037,-3.214)
N4: (89.263,109.014,-1.352)
C6: (90.385,106.167,-3.213)
C5: (90.376,107.096,-2.250)
O3': (92.490,104.863,-7.275)
OP1: (93.938,107.532,1.604)
OP2: (91.474,108.271,1.398)
C3': (91.871,103.628,-0.809)
C1': (89.867,102.915,0.243)
C5': (92.798,104.670,1.341)
O4': (90.750,103.383,1.243)
C8: (88.800,105.222,-0.058)
O2': (90.989,101.372,-1.218)
C6: (85.336,104.613,-0.168)
C5: (86.738,104.701,-0.094)
C4: (87.430,103.519,0.118)
P: (92.482,107.247,1.793)
C4': (92.085,103.507,0.692)
C2': (90.657,102.738,-1.056)
C2: (85.577,102.338,0.191)
N1: (84.776,103.391,-0.015)
N3: (86.904,102.292,0.273)
N6: (84.535,105.660,-0.386)
N7: (87.616,105.772,-0.197)
N9: (88.760,103.858,0.116)
O5': (92.125,105.900,1.025)
O3': (93.018,103.167,-1.509)
Image (generated by PyMOL):
PyMOL image
show in jmol