ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1XJR:A26:A25

Extra

PDB:
ATOM 1 O3' A A 25 35.228 40.342 68.648 1.00 79.26 O
ATOM 2 P C A 26 34.567 41.518 67.780 1.00 78.44 P
ATOM 3 OP1 C A 26 34.866 42.808 68.447 1.00 78.07 O
ATOM 4 OP2 C A 26 33.155 41.145 67.491 1.00 77.90 O
ATOM 5 O5' C A 26 35.391 41.464 66.412 1.00 76.32 O
ATOM 6 C5' C A 26 36.586 42.202 66.226 1.00 74.67 C
ATOM 7 C4' C A 26 36.989 42.135 64.763 1.00 74.34 C
ATOM 8 O4' C A 26 37.187 40.757 64.351 1.00 74.30 O
ATOM 9 C3' C A 26 35.936 42.639 63.793 1.00 73.69 C
ATOM 10 O3' C A 26 36.073 44.019 63.639 1.00 73.14 O
ATOM 11 C2' C A 26 36.307 41.897 62.518 1.00 73.67 C
ATOM 12 O2' C A 26 37.462 42.400 61.890 1.00 74.50 O
ATOM 13 C1' C A 26 36.631 40.524 63.071 1.00 72.53 C
ATOM 14 N1 C A 26 35.454 39.570 63.111 1.00 71.89 N
ATOM 15 C2 C A 26 35.135 38.847 61.947 1.00 72.32 C
ATOM 16 O2 C A 26 35.810 39.007 60.912 1.00 72.50 O
ATOM 17 N3 C A 26 34.089 37.982 61.984 1.00 71.95 N
ATOM 18 C4 C A 26 33.378 37.836 63.099 1.00 71.24 C
ATOM 19 N4 C A 26 32.367 36.979 63.072 1.00 71.35 N
ATOM 20 C5 C A 26 33.675 38.557 64.284 1.00 71.66 C
ATOM 21 C6 C A 26 34.710 39.400 64.244 1.00 71.44 C
ATOM 22 P G A 27 34.800 44.893 63.254 1.00 73.36 P
ATOM 23 OP1 G A 27 35.133 46.307 63.562 1.00 72.51 O
ATOM 24 OP2 G A 27 33.547 44.297 63.805 1.00 71.77 O
ATOM 25 O5' G A 27 34.835 44.648 61.675 1.00 72.24 O
TER

ATOM 1 O3' U B 24 30.811 36.616 69.587 1.00 98.34 O
ATOM 2 P A B 25 31.685 37.519 68.598 1.00 96.61 P
ATOM 3 OP1 A B 25 31.548 38.938 69.000 1.00 96.46 O
ATOM 4 OP2 A B 25 31.347 37.110 67.211 1.00 97.26 O
ATOM 5 O5' A B 25 33.184 37.022 68.891 1.00 93.37 O
ATOM 6 C5' A B 25 33.989 37.655 69.871 1.00 87.45 C
ATOM 7 C4' A B 25 35.325 38.006 69.272 1.00 83.09 C
ATOM 8 O4' A B 25 35.854 36.826 68.628 1.00 81.55 O
ATOM 9 C3' A B 25 35.256 39.020 68.150 1.00 81.22 C
ATOM 10 O3' A B 25 35.228 40.342 68.648 1.00 79.26 O
ATOM 11 C2' A B 25 36.557 38.726 67.416 1.00 81.09 C
ATOM 12 O2' A B 25 37.690 39.254 68.054 1.00 81.73 O
ATOM 13 C1' A B 25 36.627 37.217 67.506 1.00 80.17 C
ATOM 14 N9 A B 25 36.161 36.534 66.298 1.00 79.43 N
ATOM 15 C8 A B 25 35.080 35.708 66.189 1.00 79.15 C
ATOM 16 N7 A B 25 34.899 35.224 64.986 1.00 78.89 N
ATOM 17 C5 A B 25 35.933 35.772 64.247 1.00 79.24 C
ATOM 18 C6 A B 25 36.318 35.632 62.885 1.00 79.78 C
ATOM 19 N6 A B 25 35.635 34.866 62.025 1.00 79.89 N
ATOM 20 N1 A B 25 37.419 36.298 62.442 1.00 79.12 N
ATOM 21 C2 A B 25 38.079 37.054 63.333 1.00 79.26 C
ATOM 22 N3 A B 25 37.812 37.260 64.638 1.00 79.35 N
ATOM 23 C4 A B 25 36.722 36.581 65.042 1.00 78.93 C
ATOM 24 P C B 26 34.567 41.518 67.780 1.00 78.44 P
ATOM 25 OP1 C B 26 34.866 42.808 68.447 1.00 78.07 O
ATOM 26 OP2 C B 26 33.155 41.145 67.491 1.00 77.90 O
ATOM 27 O5' C B 26 35.391 41.464 66.412 1.00 76.32 O
TER

Atoms:
C2: (35.135,38.847,61.947)
OP1: (34.866,42.808,68.447)
OP2: (33.155,41.145,67.491)
C4: (33.378,37.836,63.099)
O5': (35.391,41.464,66.412)
C3': (35.936,42.639,63.793)
C1': (36.631,40.524,63.071)
O4': (37.187,40.757,64.351)
C5': (36.586,42.202,66.226)
P: (34.567,41.518,67.780)
O2: (35.810,39.007,60.912)
C4': (36.989,42.135,64.763)
C2': (36.307,41.897,62.518)
O2': (37.462,42.400,61.890)
N1: (35.454,39.570,63.111)
N3: (34.089,37.982,61.984)
N4: (32.367,36.979,63.072)
C6: (34.710,39.400,64.244)
C5: (33.675,38.557,64.284)
O3': (36.073,44.019,63.639)
OP1: (31.548,38.938,69.000)
OP2: (31.347,37.110,67.211)
C3': (35.256,39.020,68.150)
C1': (36.627,37.217,67.506)
C5': (33.989,37.655,69.871)
O4': (35.854,36.826,68.628)
C8: (35.080,35.708,66.189)
O2': (37.690,39.254,68.054)
C6: (36.318,35.632,62.885)
C5: (35.933,35.772,64.247)
C4: (36.722,36.581,65.042)
P: (31.685,37.519,68.598)
C4': (35.325,38.006,69.272)
C2': (36.557,38.726,67.416)
C2: (38.079,37.054,63.333)
N1: (37.419,36.298,62.442)
N3: (37.812,37.260,64.638)
N6: (35.635,34.866,62.025)
N7: (34.899,35.224,64.986)
N9: (36.161,36.534,66.298)
O5': (33.184,37.022,68.891)
O3': (35.228,40.342,68.648)
Image (generated by PyMOL):
PyMOL image
show in jmol