Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0232:0231
Extra
PDB:
ATOM 1 O3' A A 231 93.454 103.894 -1.298 1.00 49.05 O
ATOM 2 P C A 232 94.226 104.970 -2.203 1.00 51.92 P
ATOM 3 OP1 C A 232 95.503 104.352 -2.657 1.00 49.31 O
ATOM 4 OP2 C A 232 94.257 106.259 -1.476 1.00 52.11 O
ATOM 5 O5' C A 232 93.255 105.171 -3.445 1.00 50.79 O
ATOM 6 C5' C A 232 92.879 104.059 -4.269 1.00 52.09 C
ATOM 7 C4' C A 232 91.815 104.482 -5.244 1.00 51.44 C
ATOM 8 O4' C A 232 90.561 104.697 -4.548 1.00 51.64 O
ATOM 9 C3' C A 232 92.100 105.812 -5.904 1.00 50.69 C
ATOM 10 O3' C A 232 93.037 105.687 -6.959 1.00 51.06 O
ATOM 11 C2' C A 232 90.710 106.282 -6.309 1.00 50.26 C
ATOM 12 O2' C A 232 90.198 105.668 -7.471 1.00 51.11 O
ATOM 13 C1' C A 232 89.894 105.819 -5.103 1.00 49.50 C
ATOM 14 N1 C A 232 89.805 106.855 -4.065 1.00 46.98 N
ATOM 15 C2 C A 232 88.719 107.720 -4.080 1.00 45.43 C
ATOM 16 O2 C A 232 87.861 107.582 -4.958 1.00 45.74 O
ATOM 17 N3 C A 232 88.628 108.683 -3.140 1.00 45.12 N
ATOM 18 C4 C A 232 89.576 108.796 -2.208 1.00 46.08 C
ATOM 19 N4 C A 232 89.451 109.764 -1.302 1.00 46.93 N
ATOM 20 C5 C A 232 90.697 107.919 -2.165 1.00 46.64 C
ATOM 21 C6 C A 232 90.771 106.973 -3.103 1.00 46.91 C
ATOM 22 P C A 233 93.898 106.964 -7.391 1.00 50.06 P
ATOM 23 OP1 C A 233 94.677 106.576 -8.590 1.00 50.24 O
ATOM 24 OP2 C A 233 94.604 107.483 -6.191 1.00 49.34 O
ATOM 25 O5' C A 233 92.749 107.980 -7.812 1.00 48.30 O
TER
ATOM 1 O3' A B 230 92.619 107.592 3.466 1.00 40.89 O
ATOM 2 P A B 231 92.788 107.943 1.905 1.00 42.42 P
ATOM 3 OP1 A B 231 94.225 108.276 1.710 1.00 40.92 O
ATOM 4 OP2 A B 231 91.742 108.927 1.489 1.00 39.99 O
ATOM 5 O5' A B 231 92.454 106.565 1.175 1.00 41.41 O
ATOM 6 C5' A B 231 93.121 105.344 1.543 1.00 43.02 C
ATOM 7 C4' A B 231 92.445 104.163 0.885 1.00 45.53 C
ATOM 8 O4' A B 231 91.099 104.017 1.402 1.00 45.35 O
ATOM 9 C3' A B 231 92.259 104.273 -0.618 1.00 47.40 C
ATOM 10 O3' A B 231 93.454 103.894 -1.298 1.00 49.05 O
ATOM 11 C2' A B 231 91.089 103.327 -0.879 1.00 46.84 C
ATOM 12 O2' A B 231 91.460 101.966 -0.971 1.00 48.63 O
ATOM 13 C1' A B 231 90.244 103.526 0.384 1.00 44.20 C
ATOM 14 N9 A B 231 89.127 104.456 0.231 1.00 41.55 N
ATOM 15 C8 A B 231 89.180 105.816 0.075 1.00 41.40 C
ATOM 16 N7 A B 231 88.004 106.380 -0.050 1.00 41.03 N
ATOM 17 C5 A B 231 87.115 105.321 0.029 1.00 39.93 C
ATOM 18 C6 A B 231 85.712 105.258 -0.043 1.00 39.98 C
ATOM 19 N6 A B 231 84.930 106.322 -0.233 1.00 38.06 N
ATOM 20 N1 A B 231 85.133 104.045 0.084 1.00 40.87 N
ATOM 21 C2 A B 231 85.918 102.975 0.262 1.00 41.45 C
ATOM 22 N3 A B 231 87.247 102.908 0.337 1.00 41.81 N
ATOM 23 C4 A B 231 87.791 104.130 0.212 1.00 40.80 C
ATOM 24 P C B 232 94.226 104.970 -2.203 1.00 51.92 P
ATOM 25 OP1 C B 232 95.503 104.352 -2.657 1.00 49.31 O
ATOM 26 OP2 C B 232 94.257 106.259 -1.476 1.00 52.11 O
ATOM 27 O5' C B 232 93.255 105.171 -3.445 1.00 50.79 O
TER
ATOM 2 P C A 232 94.226 104.970 -2.203 1.00 51.92 P
ATOM 3 OP1 C A 232 95.503 104.352 -2.657 1.00 49.31 O
ATOM 4 OP2 C A 232 94.257 106.259 -1.476 1.00 52.11 O
ATOM 5 O5' C A 232 93.255 105.171 -3.445 1.00 50.79 O
ATOM 6 C5' C A 232 92.879 104.059 -4.269 1.00 52.09 C
ATOM 7 C4' C A 232 91.815 104.482 -5.244 1.00 51.44 C
ATOM 8 O4' C A 232 90.561 104.697 -4.548 1.00 51.64 O
ATOM 9 C3' C A 232 92.100 105.812 -5.904 1.00 50.69 C
ATOM 10 O3' C A 232 93.037 105.687 -6.959 1.00 51.06 O
ATOM 11 C2' C A 232 90.710 106.282 -6.309 1.00 50.26 C
ATOM 12 O2' C A 232 90.198 105.668 -7.471 1.00 51.11 O
ATOM 13 C1' C A 232 89.894 105.819 -5.103 1.00 49.50 C
ATOM 14 N1 C A 232 89.805 106.855 -4.065 1.00 46.98 N
ATOM 15 C2 C A 232 88.719 107.720 -4.080 1.00 45.43 C
ATOM 16 O2 C A 232 87.861 107.582 -4.958 1.00 45.74 O
ATOM 17 N3 C A 232 88.628 108.683 -3.140 1.00 45.12 N
ATOM 18 C4 C A 232 89.576 108.796 -2.208 1.00 46.08 C
ATOM 19 N4 C A 232 89.451 109.764 -1.302 1.00 46.93 N
ATOM 20 C5 C A 232 90.697 107.919 -2.165 1.00 46.64 C
ATOM 21 C6 C A 232 90.771 106.973 -3.103 1.00 46.91 C
ATOM 22 P C A 233 93.898 106.964 -7.391 1.00 50.06 P
ATOM 23 OP1 C A 233 94.677 106.576 -8.590 1.00 50.24 O
ATOM 24 OP2 C A 233 94.604 107.483 -6.191 1.00 49.34 O
ATOM 25 O5' C A 233 92.749 107.980 -7.812 1.00 48.30 O
TER
ATOM 1 O3' A B 230 92.619 107.592 3.466 1.00 40.89 O
ATOM 2 P A B 231 92.788 107.943 1.905 1.00 42.42 P
ATOM 3 OP1 A B 231 94.225 108.276 1.710 1.00 40.92 O
ATOM 4 OP2 A B 231 91.742 108.927 1.489 1.00 39.99 O
ATOM 5 O5' A B 231 92.454 106.565 1.175 1.00 41.41 O
ATOM 6 C5' A B 231 93.121 105.344 1.543 1.00 43.02 C
ATOM 7 C4' A B 231 92.445 104.163 0.885 1.00 45.53 C
ATOM 8 O4' A B 231 91.099 104.017 1.402 1.00 45.35 O
ATOM 9 C3' A B 231 92.259 104.273 -0.618 1.00 47.40 C
ATOM 10 O3' A B 231 93.454 103.894 -1.298 1.00 49.05 O
ATOM 11 C2' A B 231 91.089 103.327 -0.879 1.00 46.84 C
ATOM 12 O2' A B 231 91.460 101.966 -0.971 1.00 48.63 O
ATOM 13 C1' A B 231 90.244 103.526 0.384 1.00 44.20 C
ATOM 14 N9 A B 231 89.127 104.456 0.231 1.00 41.55 N
ATOM 15 C8 A B 231 89.180 105.816 0.075 1.00 41.40 C
ATOM 16 N7 A B 231 88.004 106.380 -0.050 1.00 41.03 N
ATOM 17 C5 A B 231 87.115 105.321 0.029 1.00 39.93 C
ATOM 18 C6 A B 231 85.712 105.258 -0.043 1.00 39.98 C
ATOM 19 N6 A B 231 84.930 106.322 -0.233 1.00 38.06 N
ATOM 20 N1 A B 231 85.133 104.045 0.084 1.00 40.87 N
ATOM 21 C2 A B 231 85.918 102.975 0.262 1.00 41.45 C
ATOM 22 N3 A B 231 87.247 102.908 0.337 1.00 41.81 N
ATOM 23 C4 A B 231 87.791 104.130 0.212 1.00 40.80 C
ATOM 24 P C B 232 94.226 104.970 -2.203 1.00 51.92 P
ATOM 25 OP1 C B 232 95.503 104.352 -2.657 1.00 49.31 O
ATOM 26 OP2 C B 232 94.257 106.259 -1.476 1.00 52.11 O
ATOM 27 O5' C B 232 93.255 105.171 -3.445 1.00 50.79 O
TER
Atoms:
C2: (88.719,107.720,-4.080)
OP1: (95.503,104.352,-2.657)
OP2: (94.257,106.259,-1.476)
C4: (89.576,108.796,-2.208)
O5': (93.255,105.171,-3.445)
C3': (92.100,105.812,-5.904)
C1': (89.894,105.819,-5.103)
O4': (90.561,104.697,-4.548)
C5': (92.879,104.059,-4.269)
P: (94.226,104.970,-2.203)
O2: (87.861,107.582,-4.958)
C4': (91.815,104.482,-5.244)
C2': (90.710,106.282,-6.309)
O2': (90.198,105.668,-7.471)
N1: (89.805,106.855,-4.065)
N3: (88.628,108.683,-3.140)
N4: (89.451,109.764,-1.302)
C6: (90.771,106.973,-3.103)
C5: (90.697,107.919,-2.165)
O3': (93.037,105.687,-6.959)
OP1: (95.503,104.352,-2.657)
OP2: (94.257,106.259,-1.476)
C4: (89.576,108.796,-2.208)
O5': (93.255,105.171,-3.445)
C3': (92.100,105.812,-5.904)
C1': (89.894,105.819,-5.103)
O4': (90.561,104.697,-4.548)
C5': (92.879,104.059,-4.269)
P: (94.226,104.970,-2.203)
O2: (87.861,107.582,-4.958)
C4': (91.815,104.482,-5.244)
C2': (90.710,106.282,-6.309)
O2': (90.198,105.668,-7.471)
N1: (89.805,106.855,-4.065)
N3: (88.628,108.683,-3.140)
N4: (89.451,109.764,-1.302)
C6: (90.771,106.973,-3.103)
C5: (90.697,107.919,-2.165)
O3': (93.037,105.687,-6.959)
OP1: (94.225,108.276,1.710)
OP2: (91.742,108.927,1.489)
C3': (92.259,104.273,-0.618)
C1': (90.244,103.526,0.384)
C5': (93.121,105.344,1.543)
O4': (91.099,104.017,1.402)
C8: (89.180,105.816,0.075)
O2': (91.460,101.966,-0.971)
C6: (85.712,105.258,-0.043)
C5: (87.115,105.321,0.029)
C4: (87.791,104.130,0.212)
P: (92.788,107.943,1.905)
C4': (92.445,104.163,0.885)
C2': (91.089,103.327,-0.879)
C2: (85.918,102.975,0.262)
N1: (85.133,104.045,0.084)
N3: (87.247,102.908,0.337)
N6: (84.930,106.322,-0.233)
N7: (88.004,106.380,-0.050)
N9: (89.127,104.456,0.231)
O5': (92.454,106.565,1.175)
O3': (93.454,103.894,-1.298)
OP2: (91.742,108.927,1.489)
C3': (92.259,104.273,-0.618)
C1': (90.244,103.526,0.384)
C5': (93.121,105.344,1.543)
O4': (91.099,104.017,1.402)
C8: (89.180,105.816,0.075)
O2': (91.460,101.966,-0.971)
C6: (85.712,105.258,-0.043)
C5: (87.115,105.321,0.029)
C4: (87.791,104.130,0.212)
P: (92.788,107.943,1.905)
C4': (92.445,104.163,0.885)
C2': (91.089,103.327,-0.879)
C2: (85.918,102.975,0.262)
N1: (85.133,104.045,0.084)
N3: (87.247,102.908,0.337)
N6: (84.930,106.322,-0.233)
N7: (88.004,106.380,-0.050)
N9: (89.127,104.456,0.231)
O5': (92.454,106.565,1.175)
O3': (93.454,103.894,-1.298)
Image (generated by PyMOL):