Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2521:A2607
Extra
PDB:
ATOM 1 O3' A A2520 52.769 143.198 141.367 1.00 43.55 O
ATOM 2 P C A2521 52.291 142.741 142.836 1.00 42.76 P
ATOM 3 OP1 C A2521 51.086 141.886 142.666 1.00 41.50 O
ATOM 4 OP2 C A2521 52.214 143.925 143.709 1.00 42.49 O
ATOM 5 O5' C A2521 53.517 141.860 143.348 1.00 41.05 O
ATOM 6 C5' C A2521 53.534 140.443 143.133 1.00 40.60 C
ATOM 7 C4' C A2521 54.668 140.033 142.206 1.00 42.28 C
ATOM 8 O4' C A2521 55.191 141.166 141.467 1.00 39.78 O
ATOM 9 C3' C A2521 55.938 139.499 142.847 1.00 41.78 C
ATOM 10 O3' C A2521 55.834 138.163 143.325 1.00 44.75 O
ATOM 11 C2' C A2521 56.908 139.547 141.680 1.00 39.72 C
ATOM 12 O2' C A2521 56.760 138.475 140.776 1.00 38.70 O
ATOM 13 C1' C A2521 56.499 140.857 141.013 1.00 38.39 C
ATOM 14 N1 C A2521 57.411 141.924 141.423 1.00 39.43 N
ATOM 15 C2 C A2521 58.738 141.901 140.934 1.00 40.62 C
ATOM 16 O2 C A2521 59.081 140.996 140.161 1.00 39.37 O
ATOM 17 N3 C A2521 59.604 142.859 141.324 1.00 41.43 N
ATOM 18 C4 C A2521 59.197 143.818 142.165 1.00 42.79 C
ATOM 19 N4 C A2521 60.081 144.756 142.528 1.00 44.07 N
ATOM 20 C5 C A2521 57.858 143.866 142.673 1.00 41.16 C
ATOM 21 C6 C A2521 57.009 142.914 142.277 1.00 39.44 C
ATOM 22 P G A2522 56.913 137.629 144.387 1.00 47.68 P
ATOM 23 OP1 G A2522 56.367 136.401 145.037 1.00 44.98 O
ATOM 24 OP2 G A2522 57.311 138.803 145.218 1.00 45.46 O
ATOM 25 O5' G A2522 58.169 137.201 143.504 1.00 44.97 O
TER
ATOM 1 O3' C B2606 54.324 146.398 145.567 1.00 59.81 O
ATOM 2 P A B2607 55.229 145.387 146.431 1.00 61.94 P
ATOM 3 OP1 A B2607 55.147 145.868 147.824 1.00 61.68 O
ATOM 4 OP2 A B2607 56.554 145.176 145.813 1.00 60.24 O
ATOM 5 O5' A B2607 54.381 144.048 146.289 1.00 68.41 O
ATOM 6 C5' A B2607 54.615 142.894 147.105 1.00 76.65 C
ATOM 7 C4' A B2607 54.214 143.172 148.531 1.00 82.84 C
ATOM 8 O4' A B2607 53.124 144.130 148.597 1.00 83.34 O
ATOM 9 C3' A B2607 53.712 141.986 149.329 1.00 87.19 C
ATOM 10 O3' A B2607 54.781 141.147 149.763 1.00 92.65 O
ATOM 11 C2' A B2607 52.975 142.676 150.473 1.00 87.14 C
ATOM 12 O2' A B2607 53.837 143.152 151.497 1.00 88.25 O
ATOM 13 C1' A B2607 52.343 143.870 149.751 1.00 84.84 C
ATOM 14 N9 A B2607 50.954 143.673 149.335 1.00 83.49 N
ATOM 15 C8 A B2607 49.854 144.295 149.871 1.00 83.89 C
ATOM 16 N7 A B2607 48.728 143.982 149.279 1.00 82.90 N
ATOM 17 C5 A B2607 49.107 143.090 148.293 1.00 81.52 C
ATOM 18 C6 A B2607 48.374 142.412 147.321 1.00 81.09 C
ATOM 19 N6 A B2607 47.053 142.549 147.174 1.00 81.21 N
ATOM 20 N1 A B2607 49.044 141.584 146.492 1.00 80.55 N
ATOM 21 C2 A B2607 50.368 141.464 146.645 1.00 79.81 C
ATOM 22 N3 A B2607 51.172 142.058 147.521 1.00 79.75 N
ATOM 23 C4 A B2607 50.473 142.870 148.326 1.00 81.53 C
ATOM 24 P C B2608 54.480 139.622 150.198 1.00 97.01 P
ATOM 25 OP1 C B2608 55.784 139.075 150.647 1.00 96.23 O
ATOM 26 OP2 C B2608 53.716 138.916 149.128 1.00 96.45 O
ATOM 27 O5' C B2608 53.523 139.760 151.467 1.00 96.42 O
TER
ATOM 2 P C A2521 52.291 142.741 142.836 1.00 42.76 P
ATOM 3 OP1 C A2521 51.086 141.886 142.666 1.00 41.50 O
ATOM 4 OP2 C A2521 52.214 143.925 143.709 1.00 42.49 O
ATOM 5 O5' C A2521 53.517 141.860 143.348 1.00 41.05 O
ATOM 6 C5' C A2521 53.534 140.443 143.133 1.00 40.60 C
ATOM 7 C4' C A2521 54.668 140.033 142.206 1.00 42.28 C
ATOM 8 O4' C A2521 55.191 141.166 141.467 1.00 39.78 O
ATOM 9 C3' C A2521 55.938 139.499 142.847 1.00 41.78 C
ATOM 10 O3' C A2521 55.834 138.163 143.325 1.00 44.75 O
ATOM 11 C2' C A2521 56.908 139.547 141.680 1.00 39.72 C
ATOM 12 O2' C A2521 56.760 138.475 140.776 1.00 38.70 O
ATOM 13 C1' C A2521 56.499 140.857 141.013 1.00 38.39 C
ATOM 14 N1 C A2521 57.411 141.924 141.423 1.00 39.43 N
ATOM 15 C2 C A2521 58.738 141.901 140.934 1.00 40.62 C
ATOM 16 O2 C A2521 59.081 140.996 140.161 1.00 39.37 O
ATOM 17 N3 C A2521 59.604 142.859 141.324 1.00 41.43 N
ATOM 18 C4 C A2521 59.197 143.818 142.165 1.00 42.79 C
ATOM 19 N4 C A2521 60.081 144.756 142.528 1.00 44.07 N
ATOM 20 C5 C A2521 57.858 143.866 142.673 1.00 41.16 C
ATOM 21 C6 C A2521 57.009 142.914 142.277 1.00 39.44 C
ATOM 22 P G A2522 56.913 137.629 144.387 1.00 47.68 P
ATOM 23 OP1 G A2522 56.367 136.401 145.037 1.00 44.98 O
ATOM 24 OP2 G A2522 57.311 138.803 145.218 1.00 45.46 O
ATOM 25 O5' G A2522 58.169 137.201 143.504 1.00 44.97 O
TER
ATOM 1 O3' C B2606 54.324 146.398 145.567 1.00 59.81 O
ATOM 2 P A B2607 55.229 145.387 146.431 1.00 61.94 P
ATOM 3 OP1 A B2607 55.147 145.868 147.824 1.00 61.68 O
ATOM 4 OP2 A B2607 56.554 145.176 145.813 1.00 60.24 O
ATOM 5 O5' A B2607 54.381 144.048 146.289 1.00 68.41 O
ATOM 6 C5' A B2607 54.615 142.894 147.105 1.00 76.65 C
ATOM 7 C4' A B2607 54.214 143.172 148.531 1.00 82.84 C
ATOM 8 O4' A B2607 53.124 144.130 148.597 1.00 83.34 O
ATOM 9 C3' A B2607 53.712 141.986 149.329 1.00 87.19 C
ATOM 10 O3' A B2607 54.781 141.147 149.763 1.00 92.65 O
ATOM 11 C2' A B2607 52.975 142.676 150.473 1.00 87.14 C
ATOM 12 O2' A B2607 53.837 143.152 151.497 1.00 88.25 O
ATOM 13 C1' A B2607 52.343 143.870 149.751 1.00 84.84 C
ATOM 14 N9 A B2607 50.954 143.673 149.335 1.00 83.49 N
ATOM 15 C8 A B2607 49.854 144.295 149.871 1.00 83.89 C
ATOM 16 N7 A B2607 48.728 143.982 149.279 1.00 82.90 N
ATOM 17 C5 A B2607 49.107 143.090 148.293 1.00 81.52 C
ATOM 18 C6 A B2607 48.374 142.412 147.321 1.00 81.09 C
ATOM 19 N6 A B2607 47.053 142.549 147.174 1.00 81.21 N
ATOM 20 N1 A B2607 49.044 141.584 146.492 1.00 80.55 N
ATOM 21 C2 A B2607 50.368 141.464 146.645 1.00 79.81 C
ATOM 22 N3 A B2607 51.172 142.058 147.521 1.00 79.75 N
ATOM 23 C4 A B2607 50.473 142.870 148.326 1.00 81.53 C
ATOM 24 P C B2608 54.480 139.622 150.198 1.00 97.01 P
ATOM 25 OP1 C B2608 55.784 139.075 150.647 1.00 96.23 O
ATOM 26 OP2 C B2608 53.716 138.916 149.128 1.00 96.45 O
ATOM 27 O5' C B2608 53.523 139.760 151.467 1.00 96.42 O
TER
Atoms:
C2: (58.738,141.901,140.934)
OP1: (51.086,141.886,142.666)
OP2: (52.214,143.925,143.709)
C4: (59.197,143.818,142.165)
O5': (53.517,141.860,143.348)
C3': (55.938,139.499,142.847)
C1': (56.499,140.857,141.013)
O4': (55.191,141.166,141.467)
C5': (53.534,140.443,143.133)
P: (52.291,142.741,142.836)
O2: (59.081,140.996,140.161)
C4': (54.668,140.033,142.206)
C2': (56.908,139.547,141.680)
O2': (56.760,138.475,140.776)
N1: (57.411,141.924,141.423)
N3: (59.604,142.859,141.324)
N4: (60.081,144.756,142.528)
C6: (57.009,142.914,142.277)
C5: (57.858,143.866,142.673)
O3': (55.834,138.163,143.325)
OP1: (51.086,141.886,142.666)
OP2: (52.214,143.925,143.709)
C4: (59.197,143.818,142.165)
O5': (53.517,141.860,143.348)
C3': (55.938,139.499,142.847)
C1': (56.499,140.857,141.013)
O4': (55.191,141.166,141.467)
C5': (53.534,140.443,143.133)
P: (52.291,142.741,142.836)
O2: (59.081,140.996,140.161)
C4': (54.668,140.033,142.206)
C2': (56.908,139.547,141.680)
O2': (56.760,138.475,140.776)
N1: (57.411,141.924,141.423)
N3: (59.604,142.859,141.324)
N4: (60.081,144.756,142.528)
C6: (57.009,142.914,142.277)
C5: (57.858,143.866,142.673)
O3': (55.834,138.163,143.325)
OP1: (55.147,145.868,147.824)
OP2: (56.554,145.176,145.813)
C3': (53.712,141.986,149.329)
C1': (52.343,143.870,149.751)
C5': (54.615,142.894,147.105)
O4': (53.124,144.130,148.597)
C8: (49.854,144.295,149.871)
O2': (53.837,143.152,151.497)
C6: (48.374,142.412,147.321)
C5: (49.107,143.090,148.293)
C4: (50.473,142.870,148.326)
P: (55.229,145.387,146.431)
C4': (54.214,143.172,148.531)
C2': (52.975,142.676,150.473)
C2: (50.368,141.464,146.645)
N1: (49.044,141.584,146.492)
N3: (51.172,142.058,147.521)
N6: (47.053,142.549,147.174)
N7: (48.728,143.982,149.279)
N9: (50.954,143.673,149.335)
O5': (54.381,144.048,146.289)
O3': (54.781,141.147,149.763)
OP2: (56.554,145.176,145.813)
C3': (53.712,141.986,149.329)
C1': (52.343,143.870,149.751)
C5': (54.615,142.894,147.105)
O4': (53.124,144.130,148.597)
C8: (49.854,144.295,149.871)
O2': (53.837,143.152,151.497)
C6: (48.374,142.412,147.321)
C5: (49.107,143.090,148.293)
C4: (50.473,142.870,148.326)
P: (55.229,145.387,146.431)
C4': (54.214,143.172,148.531)
C2': (52.975,142.676,150.473)
C2: (50.368,141.464,146.645)
N1: (49.044,141.584,146.492)
N3: (51.172,142.058,147.521)
N6: (47.053,142.549,147.174)
N7: (48.728,143.982,149.279)
N9: (50.954,143.673,149.335)
O5': (54.381,144.048,146.289)
O3': (54.781,141.147,149.763)
Image (generated by PyMOL):