Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0129:0119
Extra
PDB:
ATOM 1 O3' G A 128 93.448 148.850 15.862 1.00 59.15 O
ATOM 2 P C A 129 92.858 148.153 17.176 1.00 57.92 P
ATOM 3 OP1 C A 129 93.617 148.664 18.349 1.00 55.51 O
ATOM 4 OP2 C A 129 92.799 146.685 16.917 1.00 57.64 O
ATOM 5 O5' C A 129 91.371 148.716 17.250 1.00 55.90 O
ATOM 6 C5' C A 129 90.393 148.056 18.046 1.00 54.49 C
ATOM 7 C4' C A 129 89.222 147.654 17.197 1.00 54.17 C
ATOM 8 O4' C A 129 88.722 146.383 17.669 1.00 55.73 O
ATOM 9 C3' C A 129 88.033 148.603 17.185 1.00 53.95 C
ATOM 10 O3' C A 129 87.358 148.432 15.942 1.00 54.21 O
ATOM 11 C2' C A 129 87.167 148.024 18.301 1.00 54.63 C
ATOM 12 O2' C A 129 85.800 148.345 18.159 1.00 54.16 O
ATOM 13 C1' C A 129 87.382 146.525 18.083 1.00 56.10 C
ATOM 14 N1 C A 129 87.171 145.609 19.221 1.00 57.57 N
ATOM 15 C2 C A 129 87.282 144.231 18.982 1.00 58.76 C
ATOM 16 O2 C A 129 87.524 143.834 17.825 1.00 59.50 O
ATOM 17 N3 C A 129 87.122 143.367 20.009 1.00 58.40 N
ATOM 18 C4 C A 129 86.853 143.824 21.229 1.00 56.84 C
ATOM 19 N4 C A 129 86.709 142.930 22.207 1.00 57.17 N
ATOM 20 C5 C A 129 86.722 145.218 21.500 1.00 57.17 C
ATOM 21 C6 C A 129 86.888 146.067 20.478 1.00 56.92 C
ATOM 22 P G A 130 87.158 149.676 14.945 1.00 54.18 P
ATOM 23 OP1 G A 130 88.419 149.842 14.160 1.00 52.08 O
ATOM 24 OP2 G A 130 86.602 150.818 15.717 1.00 52.27 O
ATOM 25 O5' G A 130 86.039 149.155 13.944 1.00 51.15 O
TER
ATOM 1 O3' C B 118 85.088 147.196 25.226 1.00 50.60 O
ATOM 2 P A B 119 86.670 147.429 25.162 1.00 48.30 P
ATOM 3 OP1 A B 119 86.875 148.862 24.888 1.00 48.57 O
ATOM 4 OP2 A B 119 87.274 146.425 24.262 1.00 49.16 O
ATOM 5 O5' A B 119 87.160 147.094 26.637 1.00 46.03 O
ATOM 6 C5' A B 119 87.530 148.129 27.569 1.00 43.79 C
ATOM 7 C4' A B 119 87.529 147.568 28.966 1.00 42.51 C
ATOM 8 O4' A B 119 86.166 147.425 29.425 1.00 42.61 O
ATOM 9 C3' A B 119 88.119 146.170 29.026 1.00 41.60 C
ATOM 10 O3' A B 119 89.517 146.225 29.209 1.00 43.06 O
ATOM 11 C2' A B 119 87.391 145.536 30.197 1.00 41.05 C
ATOM 12 O2' A B 119 87.939 145.918 31.439 1.00 41.47 O
ATOM 13 C1' A B 119 86.005 146.167 30.057 1.00 41.79 C
ATOM 14 N9 A B 119 85.032 145.393 29.283 1.00 40.67 N
ATOM 15 C8 A B 119 84.454 145.740 28.086 1.00 39.84 C
ATOM 16 N7 A B 119 83.543 144.896 27.674 1.00 39.99 N
ATOM 17 C5 A B 119 83.533 143.913 28.652 1.00 41.18 C
ATOM 18 C6 A B 119 82.768 142.748 28.807 1.00 40.26 C
ATOM 19 N6 A B 119 81.822 142.371 27.950 1.00 39.29 N
ATOM 20 N1 A B 119 83.008 141.978 29.889 1.00 40.09 N
ATOM 21 C2 A B 119 83.957 142.365 30.751 1.00 40.38 C
ATOM 22 N3 A B 119 84.737 143.442 30.720 1.00 40.34 N
ATOM 23 C4 A B 119 84.468 144.189 29.634 1.00 41.55 C
ATOM 24 P A B 120 90.438 145.105 28.548 1.00 44.07 P
ATOM 25 OP1 A B 120 91.826 145.245 29.058 1.00 45.61 O
ATOM 26 OP2 A B 120 90.175 145.128 27.088 1.00 44.60 O
ATOM 27 O5' A B 120 89.852 143.759 29.144 1.00 46.00 O
TER
ATOM 2 P C A 129 92.858 148.153 17.176 1.00 57.92 P
ATOM 3 OP1 C A 129 93.617 148.664 18.349 1.00 55.51 O
ATOM 4 OP2 C A 129 92.799 146.685 16.917 1.00 57.64 O
ATOM 5 O5' C A 129 91.371 148.716 17.250 1.00 55.90 O
ATOM 6 C5' C A 129 90.393 148.056 18.046 1.00 54.49 C
ATOM 7 C4' C A 129 89.222 147.654 17.197 1.00 54.17 C
ATOM 8 O4' C A 129 88.722 146.383 17.669 1.00 55.73 O
ATOM 9 C3' C A 129 88.033 148.603 17.185 1.00 53.95 C
ATOM 10 O3' C A 129 87.358 148.432 15.942 1.00 54.21 O
ATOM 11 C2' C A 129 87.167 148.024 18.301 1.00 54.63 C
ATOM 12 O2' C A 129 85.800 148.345 18.159 1.00 54.16 O
ATOM 13 C1' C A 129 87.382 146.525 18.083 1.00 56.10 C
ATOM 14 N1 C A 129 87.171 145.609 19.221 1.00 57.57 N
ATOM 15 C2 C A 129 87.282 144.231 18.982 1.00 58.76 C
ATOM 16 O2 C A 129 87.524 143.834 17.825 1.00 59.50 O
ATOM 17 N3 C A 129 87.122 143.367 20.009 1.00 58.40 N
ATOM 18 C4 C A 129 86.853 143.824 21.229 1.00 56.84 C
ATOM 19 N4 C A 129 86.709 142.930 22.207 1.00 57.17 N
ATOM 20 C5 C A 129 86.722 145.218 21.500 1.00 57.17 C
ATOM 21 C6 C A 129 86.888 146.067 20.478 1.00 56.92 C
ATOM 22 P G A 130 87.158 149.676 14.945 1.00 54.18 P
ATOM 23 OP1 G A 130 88.419 149.842 14.160 1.00 52.08 O
ATOM 24 OP2 G A 130 86.602 150.818 15.717 1.00 52.27 O
ATOM 25 O5' G A 130 86.039 149.155 13.944 1.00 51.15 O
TER
ATOM 1 O3' C B 118 85.088 147.196 25.226 1.00 50.60 O
ATOM 2 P A B 119 86.670 147.429 25.162 1.00 48.30 P
ATOM 3 OP1 A B 119 86.875 148.862 24.888 1.00 48.57 O
ATOM 4 OP2 A B 119 87.274 146.425 24.262 1.00 49.16 O
ATOM 5 O5' A B 119 87.160 147.094 26.637 1.00 46.03 O
ATOM 6 C5' A B 119 87.530 148.129 27.569 1.00 43.79 C
ATOM 7 C4' A B 119 87.529 147.568 28.966 1.00 42.51 C
ATOM 8 O4' A B 119 86.166 147.425 29.425 1.00 42.61 O
ATOM 9 C3' A B 119 88.119 146.170 29.026 1.00 41.60 C
ATOM 10 O3' A B 119 89.517 146.225 29.209 1.00 43.06 O
ATOM 11 C2' A B 119 87.391 145.536 30.197 1.00 41.05 C
ATOM 12 O2' A B 119 87.939 145.918 31.439 1.00 41.47 O
ATOM 13 C1' A B 119 86.005 146.167 30.057 1.00 41.79 C
ATOM 14 N9 A B 119 85.032 145.393 29.283 1.00 40.67 N
ATOM 15 C8 A B 119 84.454 145.740 28.086 1.00 39.84 C
ATOM 16 N7 A B 119 83.543 144.896 27.674 1.00 39.99 N
ATOM 17 C5 A B 119 83.533 143.913 28.652 1.00 41.18 C
ATOM 18 C6 A B 119 82.768 142.748 28.807 1.00 40.26 C
ATOM 19 N6 A B 119 81.822 142.371 27.950 1.00 39.29 N
ATOM 20 N1 A B 119 83.008 141.978 29.889 1.00 40.09 N
ATOM 21 C2 A B 119 83.957 142.365 30.751 1.00 40.38 C
ATOM 22 N3 A B 119 84.737 143.442 30.720 1.00 40.34 N
ATOM 23 C4 A B 119 84.468 144.189 29.634 1.00 41.55 C
ATOM 24 P A B 120 90.438 145.105 28.548 1.00 44.07 P
ATOM 25 OP1 A B 120 91.826 145.245 29.058 1.00 45.61 O
ATOM 26 OP2 A B 120 90.175 145.128 27.088 1.00 44.60 O
ATOM 27 O5' A B 120 89.852 143.759 29.144 1.00 46.00 O
TER
Atoms:
C2: (87.282,144.231,18.982)
OP1: (93.617,148.664,18.349)
OP2: (92.799,146.685,16.917)
C4: (86.853,143.824,21.229)
O5': (91.371,148.716,17.250)
C3': (88.033,148.603,17.185)
C1': (87.382,146.525,18.083)
O4': (88.722,146.383,17.669)
C5': (90.393,148.056,18.046)
P: (92.858,148.153,17.176)
O2: (87.524,143.834,17.825)
C4': (89.222,147.654,17.197)
C2': (87.167,148.024,18.301)
O2': (85.800,148.345,18.159)
N1: (87.171,145.609,19.221)
N3: (87.122,143.367,20.009)
N4: (86.709,142.930,22.207)
C6: (86.888,146.067,20.478)
C5: (86.722,145.218,21.500)
O3': (87.358,148.432,15.942)
OP1: (93.617,148.664,18.349)
OP2: (92.799,146.685,16.917)
C4: (86.853,143.824,21.229)
O5': (91.371,148.716,17.250)
C3': (88.033,148.603,17.185)
C1': (87.382,146.525,18.083)
O4': (88.722,146.383,17.669)
C5': (90.393,148.056,18.046)
P: (92.858,148.153,17.176)
O2: (87.524,143.834,17.825)
C4': (89.222,147.654,17.197)
C2': (87.167,148.024,18.301)
O2': (85.800,148.345,18.159)
N1: (87.171,145.609,19.221)
N3: (87.122,143.367,20.009)
N4: (86.709,142.930,22.207)
C6: (86.888,146.067,20.478)
C5: (86.722,145.218,21.500)
O3': (87.358,148.432,15.942)
OP1: (86.875,148.862,24.888)
OP2: (87.274,146.425,24.262)
C3': (88.119,146.170,29.026)
C1': (86.005,146.167,30.057)
C5': (87.530,148.129,27.569)
O4': (86.166,147.425,29.425)
C8: (84.454,145.740,28.086)
O2': (87.939,145.918,31.439)
C6: (82.768,142.748,28.807)
C5: (83.533,143.913,28.652)
C4: (84.468,144.189,29.634)
P: (86.670,147.429,25.162)
C4': (87.529,147.568,28.966)
C2': (87.391,145.536,30.197)
C2: (83.957,142.365,30.751)
N1: (83.008,141.978,29.889)
N3: (84.737,143.442,30.720)
N6: (81.822,142.371,27.950)
N7: (83.543,144.896,27.674)
N9: (85.032,145.393,29.283)
O5': (87.160,147.094,26.637)
O3': (89.517,146.225,29.209)
OP2: (87.274,146.425,24.262)
C3': (88.119,146.170,29.026)
C1': (86.005,146.167,30.057)
C5': (87.530,148.129,27.569)
O4': (86.166,147.425,29.425)
C8: (84.454,145.740,28.086)
O2': (87.939,145.918,31.439)
C6: (82.768,142.748,28.807)
C5: (83.533,143.913,28.652)
C4: (84.468,144.189,29.634)
P: (86.670,147.429,25.162)
C4': (87.529,147.568,28.966)
C2': (87.391,145.536,30.197)
C2: (83.957,142.365,30.751)
N1: (83.008,141.978,29.889)
N3: (84.737,143.442,30.720)
N6: (81.822,142.371,27.950)
N7: (83.543,144.896,27.674)
N9: (85.032,145.393,29.283)
O5': (87.160,147.094,26.637)
O3': (89.517,146.225,29.209)
Image (generated by PyMOL):