Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:02521:02607
Extra
PDB:
ATOM 1 O3' A A2520 52.842 142.923 140.810 1.00 38.19 O
ATOM 2 P C A2521 52.385 142.399 142.275 1.00 37.51 P
ATOM 3 OP1 C A2521 51.182 141.537 142.152 1.00 35.44 O
ATOM 4 OP2 C A2521 52.347 143.563 143.180 1.00 39.57 O
ATOM 5 O5' C A2521 53.614 141.508 142.766 1.00 36.30 O
ATOM 6 C5' C A2521 53.644 140.097 142.528 1.00 36.56 C
ATOM 7 C4' C A2521 54.826 139.715 141.651 1.00 39.11 C
ATOM 8 O4' C A2521 55.336 140.853 140.901 1.00 37.81 O
ATOM 9 C3' C A2521 56.095 139.211 142.313 1.00 38.10 C
ATOM 10 O3' C A2521 55.955 137.880 142.789 1.00 41.22 O
ATOM 11 C2' C A2521 57.054 139.246 141.133 1.00 37.53 C
ATOM 12 O2' C A2521 56.793 138.214 140.204 1.00 36.41 O
ATOM 13 C1' C A2521 56.662 140.567 140.479 1.00 37.97 C
ATOM 14 N1 C A2521 57.565 141.646 140.912 1.00 41.56 N
ATOM 15 C2 C A2521 58.894 141.659 140.412 1.00 43.85 C
ATOM 16 O2 C A2521 59.263 140.755 139.638 1.00 44.45 O
ATOM 17 N3 C A2521 59.733 142.646 140.795 1.00 42.85 N
ATOM 18 C4 C A2521 59.309 143.588 141.638 1.00 42.79 C
ATOM 19 N4 C A2521 60.169 144.549 141.978 1.00 44.95 N
ATOM 20 C5 C A2521 57.980 143.591 142.167 1.00 42.70 C
ATOM 21 C6 C A2521 57.150 142.615 141.779 1.00 39.87 C
ATOM 22 P G A2522 56.958 137.327 143.919 1.00 42.80 P
ATOM 23 OP1 G A2522 56.302 136.116 144.488 1.00 41.89 O
ATOM 24 OP2 G A2522 57.357 138.458 144.813 1.00 40.45 O
ATOM 25 O5' G A2522 58.256 136.855 143.121 1.00 40.83 O
TER
ATOM 1 O3' C B2606 54.385 145.998 144.964 1.00 61.07 O
ATOM 2 P A B2607 55.346 145.093 145.873 1.00 64.23 P
ATOM 3 OP1 A B2607 55.484 145.765 147.181 1.00 62.58 O
ATOM 4 OP2 A B2607 56.563 144.728 145.105 1.00 64.13 O
ATOM 5 O5' A B2607 54.463 143.782 146.033 1.00 71.31 O
ATOM 6 C5' A B2607 54.877 142.698 146.855 1.00 80.65 C
ATOM 7 C4' A B2607 54.507 142.977 148.284 1.00 87.97 C
ATOM 8 O4' A B2607 53.389 143.901 148.348 1.00 88.08 O
ATOM 9 C3' A B2607 54.044 141.772 149.074 1.00 92.75 C
ATOM 10 O3' A B2607 55.137 140.964 149.507 1.00100.17 O
ATOM 11 C2' A B2607 53.256 142.419 150.207 1.00 91.40 C
ATOM 12 O2' A B2607 54.080 142.898 151.261 1.00 90.05 O
ATOM 13 C1' A B2607 52.591 143.595 149.479 1.00 89.24 C
ATOM 14 N9 A B2607 51.210 143.381 149.027 1.00 87.82 N
ATOM 15 C8 A B2607 50.086 143.976 149.554 1.00 87.40 C
ATOM 16 N7 A B2607 48.975 143.661 148.931 1.00 85.70 N
ATOM 17 C5 A B2607 49.388 142.792 147.932 1.00 84.34 C
ATOM 18 C6 A B2607 48.683 142.120 146.925 1.00 83.02 C
ATOM 19 N6 A B2607 47.365 142.239 146.741 1.00 81.15 N
ATOM 20 N1 A B2607 49.387 141.318 146.096 1.00 82.69 N
ATOM 21 C2 A B2607 50.710 141.215 146.275 1.00 82.48 C
ATOM 22 N3 A B2607 51.488 141.805 147.180 1.00 83.16 N
ATOM 23 C4 A B2607 50.759 142.592 147.989 1.00 85.25 C
ATOM 24 P C B2608 54.898 139.401 149.800 1.00105.63 P
ATOM 25 OP1 C B2608 56.208 138.830 150.222 1.00106.10 O
ATOM 26 OP2 C B2608 54.175 138.798 148.644 1.00105.13 O
ATOM 27 O5' C B2608 53.916 139.423 151.059 1.00105.56 O
TER
ATOM 2 P C A2521 52.385 142.399 142.275 1.00 37.51 P
ATOM 3 OP1 C A2521 51.182 141.537 142.152 1.00 35.44 O
ATOM 4 OP2 C A2521 52.347 143.563 143.180 1.00 39.57 O
ATOM 5 O5' C A2521 53.614 141.508 142.766 1.00 36.30 O
ATOM 6 C5' C A2521 53.644 140.097 142.528 1.00 36.56 C
ATOM 7 C4' C A2521 54.826 139.715 141.651 1.00 39.11 C
ATOM 8 O4' C A2521 55.336 140.853 140.901 1.00 37.81 O
ATOM 9 C3' C A2521 56.095 139.211 142.313 1.00 38.10 C
ATOM 10 O3' C A2521 55.955 137.880 142.789 1.00 41.22 O
ATOM 11 C2' C A2521 57.054 139.246 141.133 1.00 37.53 C
ATOM 12 O2' C A2521 56.793 138.214 140.204 1.00 36.41 O
ATOM 13 C1' C A2521 56.662 140.567 140.479 1.00 37.97 C
ATOM 14 N1 C A2521 57.565 141.646 140.912 1.00 41.56 N
ATOM 15 C2 C A2521 58.894 141.659 140.412 1.00 43.85 C
ATOM 16 O2 C A2521 59.263 140.755 139.638 1.00 44.45 O
ATOM 17 N3 C A2521 59.733 142.646 140.795 1.00 42.85 N
ATOM 18 C4 C A2521 59.309 143.588 141.638 1.00 42.79 C
ATOM 19 N4 C A2521 60.169 144.549 141.978 1.00 44.95 N
ATOM 20 C5 C A2521 57.980 143.591 142.167 1.00 42.70 C
ATOM 21 C6 C A2521 57.150 142.615 141.779 1.00 39.87 C
ATOM 22 P G A2522 56.958 137.327 143.919 1.00 42.80 P
ATOM 23 OP1 G A2522 56.302 136.116 144.488 1.00 41.89 O
ATOM 24 OP2 G A2522 57.357 138.458 144.813 1.00 40.45 O
ATOM 25 O5' G A2522 58.256 136.855 143.121 1.00 40.83 O
TER
ATOM 1 O3' C B2606 54.385 145.998 144.964 1.00 61.07 O
ATOM 2 P A B2607 55.346 145.093 145.873 1.00 64.23 P
ATOM 3 OP1 A B2607 55.484 145.765 147.181 1.00 62.58 O
ATOM 4 OP2 A B2607 56.563 144.728 145.105 1.00 64.13 O
ATOM 5 O5' A B2607 54.463 143.782 146.033 1.00 71.31 O
ATOM 6 C5' A B2607 54.877 142.698 146.855 1.00 80.65 C
ATOM 7 C4' A B2607 54.507 142.977 148.284 1.00 87.97 C
ATOM 8 O4' A B2607 53.389 143.901 148.348 1.00 88.08 O
ATOM 9 C3' A B2607 54.044 141.772 149.074 1.00 92.75 C
ATOM 10 O3' A B2607 55.137 140.964 149.507 1.00100.17 O
ATOM 11 C2' A B2607 53.256 142.419 150.207 1.00 91.40 C
ATOM 12 O2' A B2607 54.080 142.898 151.261 1.00 90.05 O
ATOM 13 C1' A B2607 52.591 143.595 149.479 1.00 89.24 C
ATOM 14 N9 A B2607 51.210 143.381 149.027 1.00 87.82 N
ATOM 15 C8 A B2607 50.086 143.976 149.554 1.00 87.40 C
ATOM 16 N7 A B2607 48.975 143.661 148.931 1.00 85.70 N
ATOM 17 C5 A B2607 49.388 142.792 147.932 1.00 84.34 C
ATOM 18 C6 A B2607 48.683 142.120 146.925 1.00 83.02 C
ATOM 19 N6 A B2607 47.365 142.239 146.741 1.00 81.15 N
ATOM 20 N1 A B2607 49.387 141.318 146.096 1.00 82.69 N
ATOM 21 C2 A B2607 50.710 141.215 146.275 1.00 82.48 C
ATOM 22 N3 A B2607 51.488 141.805 147.180 1.00 83.16 N
ATOM 23 C4 A B2607 50.759 142.592 147.989 1.00 85.25 C
ATOM 24 P C B2608 54.898 139.401 149.800 1.00105.63 P
ATOM 25 OP1 C B2608 56.208 138.830 150.222 1.00106.10 O
ATOM 26 OP2 C B2608 54.175 138.798 148.644 1.00105.13 O
ATOM 27 O5' C B2608 53.916 139.423 151.059 1.00105.56 O
TER
Atoms:
C2: (58.894,141.659,140.412)
OP1: (51.182,141.537,142.152)
OP2: (52.347,143.563,143.180)
C4: (59.309,143.588,141.638)
O5': (53.614,141.508,142.766)
C3': (56.095,139.211,142.313)
C1': (56.662,140.567,140.479)
O4': (55.336,140.853,140.901)
C5': (53.644,140.097,142.528)
P: (52.385,142.399,142.275)
O2: (59.263,140.755,139.638)
C4': (54.826,139.715,141.651)
C2': (57.054,139.246,141.133)
O2': (56.793,138.214,140.204)
N1: (57.565,141.646,140.912)
N3: (59.733,142.646,140.795)
N4: (60.169,144.549,141.978)
C6: (57.150,142.615,141.779)
C5: (57.980,143.591,142.167)
O3': (55.955,137.880,142.789)
OP1: (51.182,141.537,142.152)
OP2: (52.347,143.563,143.180)
C4: (59.309,143.588,141.638)
O5': (53.614,141.508,142.766)
C3': (56.095,139.211,142.313)
C1': (56.662,140.567,140.479)
O4': (55.336,140.853,140.901)
C5': (53.644,140.097,142.528)
P: (52.385,142.399,142.275)
O2: (59.263,140.755,139.638)
C4': (54.826,139.715,141.651)
C2': (57.054,139.246,141.133)
O2': (56.793,138.214,140.204)
N1: (57.565,141.646,140.912)
N3: (59.733,142.646,140.795)
N4: (60.169,144.549,141.978)
C6: (57.150,142.615,141.779)
C5: (57.980,143.591,142.167)
O3': (55.955,137.880,142.789)
OP1: (55.484,145.765,147.181)
OP2: (56.563,144.728,145.105)
C3': (54.044,141.772,149.074)
C1': (52.591,143.595,149.479)
C5': (54.877,142.698,146.855)
O4': (53.389,143.901,148.348)
C8: (50.086,143.976,149.554)
O2': (54.080,142.898,151.261)
C6: (48.683,142.120,146.925)
C5: (49.388,142.792,147.932)
C4: (50.759,142.592,147.989)
P: (55.346,145.093,145.873)
C4': (54.507,142.977,148.284)
C2': (53.256,142.419,150.207)
C2: (50.710,141.215,146.275)
N1: (49.387,141.318,146.096)
N3: (51.488,141.805,147.180)
N6: (47.365,142.239,146.741)
N7: (48.975,143.661,148.931)
N9: (51.210,143.381,149.027)
O5': (54.463,143.782,146.033)
O3': (55.137,140.964,149.507)
OP2: (56.563,144.728,145.105)
C3': (54.044,141.772,149.074)
C1': (52.591,143.595,149.479)
C5': (54.877,142.698,146.855)
O4': (53.389,143.901,148.348)
C8: (50.086,143.976,149.554)
O2': (54.080,142.898,151.261)
C6: (48.683,142.120,146.925)
C5: (49.388,142.792,147.932)
C4: (50.759,142.592,147.989)
P: (55.346,145.093,145.873)
C4': (54.507,142.977,148.284)
C2': (53.256,142.419,150.207)
C2: (50.710,141.215,146.275)
N1: (49.387,141.318,146.096)
N3: (51.488,141.805,147.180)
N6: (47.365,142.239,146.741)
N7: (48.975,143.661,148.931)
N9: (51.210,143.381,149.027)
O5': (54.463,143.782,146.033)
O3': (55.137,140.964,149.507)
Image (generated by PyMOL):