ClaRNA

Doublet info:

Details

Nucleotide types: CC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1G:A820:A821

Extra

PDB:
ATOM 1 O3' U A 819 -62.230 70.653 6.719 1.00222.15 O
ATOM 2 P C A 820 -62.578 70.428 5.169 1.00244.75 P
ATOM 3 OP1 C A 820 -63.522 71.490 4.750 1.00199.81 O
ATOM 4 OP2 C A 820 -62.931 69.002 4.982 1.00197.77 O
ATOM 5 O5' C A 820 -61.175 70.671 4.439 1.00205.94 O
ATOM 6 C5' C A 820 -60.842 71.944 3.892 1.00187.21 C
ATOM 7 C4' C A 820 -59.422 71.927 3.358 1.00183.40 C
ATOM 8 O4' C A 820 -58.466 72.069 4.443 1.00184.47 O
ATOM 9 C3' C A 820 -58.992 70.622 2.712 1.00185.96 C
ATOM 10 O3' C A 820 -59.537 70.444 1.413 1.00200.28 O
ATOM 11 C2' C A 820 -57.488 70.851 2.705 1.00189.20 C
ATOM 12 O2' C A 820 -57.104 71.894 1.831 1.00174.61 O
ATOM 13 C1' C A 820 -57.318 71.291 4.152 1.00191.65 C
ATOM 14 N1 C A 820 -57.237 70.138 5.105 1.00191.90 N
ATOM 15 C2 C A 820 -55.981 69.719 5.556 1.00188.05 C
ATOM 16 O2 C A 820 -54.970 70.315 5.159 1.00174.85 O
ATOM 17 N3 C A 820 -55.914 68.671 6.418 1.00191.97 N
ATOM 18 C4 C A 820 -57.030 68.057 6.821 1.00191.81 C
ATOM 19 N4 C A 820 -56.914 67.033 7.670 1.00175.82 N
ATOM 20 C5 C A 820 -58.317 68.466 6.372 1.00187.93 C
ATOM 21 C6 C A 820 -58.370 69.498 5.525 1.00183.20 C
ATOM 22 P C A 821 -59.869 68.954 0.920 1.00183.33 P
ATOM 23 OP1 C A 821 -60.891 69.052 -0.143 1.00135.12 O
ATOM 24 OP2 C A 821 -60.141 68.122 2.117 1.00155.25 O
ATOM 25 O5' C A 821 -58.478 68.466 0.285 1.00151.77 O
TER

ATOM 1 O3' C B 820 -59.537 70.444 1.413 1.00200.28 O
ATOM 2 P C B 821 -59.869 68.954 0.920 1.00183.33 P
ATOM 3 OP1 C B 821 -60.891 69.052 -0.143 1.00135.12 O
ATOM 4 OP2 C B 821 -60.141 68.122 2.117 1.00155.25 O
ATOM 5 O5' C B 821 -58.478 68.466 0.285 1.00151.77 O
ATOM 6 C5' C B 821 -57.619 69.393 -0.389 1.00139.54 C
ATOM 7 C4' C B 821 -56.162 68.967 -0.302 1.00136.89 C
ATOM 8 O4' C B 821 -55.719 68.951 1.075 1.00142.53 O
ATOM 9 C3' C B 821 -55.891 67.561 -0.794 1.00133.92 C
ATOM 10 O3' C B 821 -55.657 67.601 -2.180 1.00136.63 O
ATOM 11 C2' C B 821 -54.632 67.156 -0.032 1.00131.30 C
ATOM 12 O2' C B 821 -53.452 67.552 -0.698 1.00129.70 O
ATOM 13 C1' C B 821 -54.759 67.930 1.272 1.00134.35 C
ATOM 14 N1 C B 821 -55.197 67.105 2.426 1.00131.65 N
ATOM 15 C2 C B 821 -54.265 66.308 3.088 1.00131.26 C
ATOM 16 O2 C B 821 -53.096 66.304 2.688 1.00125.00 O
ATOM 17 N3 C B 821 -54.674 65.566 4.144 1.00131.74 N
ATOM 18 C4 C B 821 -55.947 65.606 4.537 1.00129.23 C
ATOM 19 N4 C B 821 -56.306 64.856 5.583 1.00123.49 N
ATOM 20 C5 C B 821 -56.912 66.418 3.876 1.00127.65 C
ATOM 21 C6 C B 821 -56.495 67.143 2.835 1.00127.58 C
ATOM 22 P U B 822 -56.161 66.356 -3.035 1.00130.27 P
ATOM 23 OP1 U B 822 -56.071 66.703 -4.469 1.00122.43 O
ATOM 24 OP2 U B 822 -57.456 65.928 -2.457 1.00118.44 O
ATOM 25 O5' U B 822 -55.062 65.239 -2.687 1.00123.73 O
TER

Atoms:
C2: (-55.981,69.719,5.556)
OP1: (-63.522,71.490,4.750)
OP2: (-62.931,69.002,4.982)
C4: (-57.030,68.057,6.821)
O5': (-61.175,70.671,4.439)
C3': (-58.992,70.622,2.712)
C1': (-57.318,71.291,4.152)
O4': (-58.466,72.069,4.443)
C5': (-60.842,71.944,3.892)
P: (-62.578,70.428,5.169)
O2: (-54.970,70.315,5.159)
C4': (-59.422,71.927,3.358)
C2': (-57.488,70.851,2.705)
O2': (-57.104,71.894,1.831)
N1: (-57.237,70.138,5.105)
N3: (-55.914,68.671,6.418)
N4: (-56.914,67.033,7.670)
C6: (-58.370,69.498,5.525)
C5: (-58.317,68.466,6.372)
O3': (-59.537,70.444,1.413)
C2: (-54.265,66.308,3.088)
OP1: (-60.891,69.052,-0.143)
OP2: (-60.141,68.122,2.117)
C4: (-55.947,65.606,4.537)
O5': (-58.478,68.466,0.285)
C3': (-55.891,67.561,-0.794)
C1': (-54.759,67.930,1.272)
O4': (-55.719,68.951,1.075)
C5': (-57.619,69.393,-0.389)
P: (-59.869,68.954,0.920)
O2: (-53.096,66.304,2.688)
C4': (-56.162,68.967,-0.302)
C2': (-54.632,67.156,-0.032)
O2': (-53.452,67.552,-0.698)
N1: (-55.197,67.105,2.426)
N3: (-54.674,65.566,4.144)
N4: (-56.306,64.856,5.583)
C6: (-56.495,67.143,2.835)
C5: (-56.912,66.418,3.876)
O3': (-55.657,67.601,-2.180)
Image (generated by PyMOL):
PyMOL image
show in jmol