Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIY:A2:A3
Extra
PDB:
ATOM 1 O3' G A 1 31.395 -5.125 7.619 1.00 29.68 O
ATOM 2 P C A 2 30.518 -4.167 8.561 1.00 28.97 P
ATOM 3 OP1 C A 2 30.315 -2.896 7.836 1.00 28.80 O
ATOM 4 OP2 C A 2 31.117 -4.150 9.913 1.00 29.02 O
ATOM 5 O5' C A 2 29.114 -4.927 8.655 1.00 28.57 O
ATOM 6 C5' C A 2 28.298 -5.029 7.494 1.00 28.30 C
ATOM 7 C4' C A 2 27.126 -5.959 7.720 1.00 28.10 C
ATOM 8 O4' C A 2 27.585 -7.255 8.170 1.00 27.38 O
ATOM 9 C3' C A 2 26.176 -5.513 8.816 1.00 28.41 C
ATOM 10 O3' C A 2 25.284 -4.537 8.321 1.00 29.26 O
ATOM 11 C2' C A 2 25.477 -6.821 9.154 1.00 27.83 C
ATOM 12 O2' C A 2 24.490 -7.178 8.207 1.00 28.06 O
ATOM 13 C1' C A 2 26.652 -7.792 9.094 1.00 27.01 C
ATOM 14 N1 C A 2 27.312 -7.997 10.426 1.00 26.18 N
ATOM 15 C2 C A 2 26.710 -8.823 11.386 1.00 26.14 C
ATOM 16 O2 C A 2 25.639 -9.385 11.143 1.00 26.57 O
ATOM 17 N3 C A 2 27.321 -8.995 12.582 1.00 26.30 N
ATOM 18 C4 C A 2 28.479 -8.391 12.841 1.00 26.25 C
ATOM 19 N4 C A 2 29.030 -8.604 14.040 1.00 26.92 N
ATOM 20 C5 C A 2 29.115 -7.546 11.885 1.00 26.06 C
ATOM 21 C6 C A 2 28.501 -7.384 10.708 1.00 25.97 C
ATOM 22 P C A 3 24.864 -3.316 9.260 1.00 30.40 P
ATOM 23 OP1 C A 3 24.198 -2.311 8.398 1.00 30.57 O
ATOM 24 OP2 C A 3 26.033 -2.941 10.096 1.00 30.29 O
ATOM 25 O5' C A 3 23.777 -3.965 10.234 1.00 30.97 O
TER
ATOM 1 O3' C B 2 25.284 -4.537 8.321 1.00 29.26 O
ATOM 2 P C B 3 24.864 -3.316 9.260 1.00 30.40 P
ATOM 3 OP1 C B 3 24.198 -2.311 8.398 1.00 30.57 O
ATOM 4 OP2 C B 3 26.033 -2.941 10.096 1.00 30.29 O
ATOM 5 O5' C B 3 23.777 -3.965 10.234 1.00 30.97 O
ATOM 6 C5' C B 3 22.499 -4.331 9.742 1.00 32.08 C
ATOM 7 C4' C B 3 21.782 -5.194 10.760 1.00 33.07 C
ATOM 8 O4' C B 3 22.566 -6.383 11.046 1.00 32.90 O
ATOM 9 C3' C B 3 21.602 -4.559 12.131 1.00 33.54 C
ATOM 10 O3' C B 3 20.522 -3.648 12.161 1.00 34.62 O
ATOM 11 C2' C B 3 21.318 -5.793 12.967 1.00 33.37 C
ATOM 12 O2' C B 3 20.016 -6.302 12.766 1.00 34.36 O
ATOM 13 C1' C B 3 22.354 -6.758 12.400 1.00 32.77 C
ATOM 14 N1 C B 3 23.642 -6.748 13.177 1.00 31.92 N
ATOM 15 C2 C B 3 23.720 -7.426 14.405 1.00 31.44 C
ATOM 16 O2 C B 3 22.737 -8.032 14.844 1.00 31.26 O
ATOM 17 N3 C B 3 24.890 -7.407 15.090 1.00 31.68 N
ATOM 18 C4 C B 3 25.947 -6.749 14.600 1.00 31.85 C
ATOM 19 N4 C B 3 27.076 -6.761 15.312 1.00 32.11 N
ATOM 20 C5 C B 3 25.893 -6.048 13.359 1.00 31.74 C
ATOM 21 C6 C B 3 24.733 -6.078 12.692 1.00 31.91 C
ATOM 22 P G B 4 20.628 -2.316 13.048 1.00 36.42 P
ATOM 23 OP1 G B 4 19.434 -1.509 12.702 1.00 36.50 O
ATOM 24 OP2 G B 4 21.990 -1.735 12.930 1.00 35.47 O
ATOM 25 O5' G B 4 20.498 -2.837 14.560 1.00 37.41 O
TER
ATOM 2 P C A 2 30.518 -4.167 8.561 1.00 28.97 P
ATOM 3 OP1 C A 2 30.315 -2.896 7.836 1.00 28.80 O
ATOM 4 OP2 C A 2 31.117 -4.150 9.913 1.00 29.02 O
ATOM 5 O5' C A 2 29.114 -4.927 8.655 1.00 28.57 O
ATOM 6 C5' C A 2 28.298 -5.029 7.494 1.00 28.30 C
ATOM 7 C4' C A 2 27.126 -5.959 7.720 1.00 28.10 C
ATOM 8 O4' C A 2 27.585 -7.255 8.170 1.00 27.38 O
ATOM 9 C3' C A 2 26.176 -5.513 8.816 1.00 28.41 C
ATOM 10 O3' C A 2 25.284 -4.537 8.321 1.00 29.26 O
ATOM 11 C2' C A 2 25.477 -6.821 9.154 1.00 27.83 C
ATOM 12 O2' C A 2 24.490 -7.178 8.207 1.00 28.06 O
ATOM 13 C1' C A 2 26.652 -7.792 9.094 1.00 27.01 C
ATOM 14 N1 C A 2 27.312 -7.997 10.426 1.00 26.18 N
ATOM 15 C2 C A 2 26.710 -8.823 11.386 1.00 26.14 C
ATOM 16 O2 C A 2 25.639 -9.385 11.143 1.00 26.57 O
ATOM 17 N3 C A 2 27.321 -8.995 12.582 1.00 26.30 N
ATOM 18 C4 C A 2 28.479 -8.391 12.841 1.00 26.25 C
ATOM 19 N4 C A 2 29.030 -8.604 14.040 1.00 26.92 N
ATOM 20 C5 C A 2 29.115 -7.546 11.885 1.00 26.06 C
ATOM 21 C6 C A 2 28.501 -7.384 10.708 1.00 25.97 C
ATOM 22 P C A 3 24.864 -3.316 9.260 1.00 30.40 P
ATOM 23 OP1 C A 3 24.198 -2.311 8.398 1.00 30.57 O
ATOM 24 OP2 C A 3 26.033 -2.941 10.096 1.00 30.29 O
ATOM 25 O5' C A 3 23.777 -3.965 10.234 1.00 30.97 O
TER
ATOM 1 O3' C B 2 25.284 -4.537 8.321 1.00 29.26 O
ATOM 2 P C B 3 24.864 -3.316 9.260 1.00 30.40 P
ATOM 3 OP1 C B 3 24.198 -2.311 8.398 1.00 30.57 O
ATOM 4 OP2 C B 3 26.033 -2.941 10.096 1.00 30.29 O
ATOM 5 O5' C B 3 23.777 -3.965 10.234 1.00 30.97 O
ATOM 6 C5' C B 3 22.499 -4.331 9.742 1.00 32.08 C
ATOM 7 C4' C B 3 21.782 -5.194 10.760 1.00 33.07 C
ATOM 8 O4' C B 3 22.566 -6.383 11.046 1.00 32.90 O
ATOM 9 C3' C B 3 21.602 -4.559 12.131 1.00 33.54 C
ATOM 10 O3' C B 3 20.522 -3.648 12.161 1.00 34.62 O
ATOM 11 C2' C B 3 21.318 -5.793 12.967 1.00 33.37 C
ATOM 12 O2' C B 3 20.016 -6.302 12.766 1.00 34.36 O
ATOM 13 C1' C B 3 22.354 -6.758 12.400 1.00 32.77 C
ATOM 14 N1 C B 3 23.642 -6.748 13.177 1.00 31.92 N
ATOM 15 C2 C B 3 23.720 -7.426 14.405 1.00 31.44 C
ATOM 16 O2 C B 3 22.737 -8.032 14.844 1.00 31.26 O
ATOM 17 N3 C B 3 24.890 -7.407 15.090 1.00 31.68 N
ATOM 18 C4 C B 3 25.947 -6.749 14.600 1.00 31.85 C
ATOM 19 N4 C B 3 27.076 -6.761 15.312 1.00 32.11 N
ATOM 20 C5 C B 3 25.893 -6.048 13.359 1.00 31.74 C
ATOM 21 C6 C B 3 24.733 -6.078 12.692 1.00 31.91 C
ATOM 22 P G B 4 20.628 -2.316 13.048 1.00 36.42 P
ATOM 23 OP1 G B 4 19.434 -1.509 12.702 1.00 36.50 O
ATOM 24 OP2 G B 4 21.990 -1.735 12.930 1.00 35.47 O
ATOM 25 O5' G B 4 20.498 -2.837 14.560 1.00 37.41 O
TER
Atoms:
C2: (26.710,-8.823,11.386)
OP1: (30.315,-2.896,7.836)
OP2: (31.117,-4.150,9.913)
C4: (28.479,-8.391,12.841)
O5': (29.114,-4.927,8.655)
C3': (26.176,-5.513,8.816)
C1': (26.652,-7.792,9.094)
O4': (27.585,-7.255,8.170)
C5': (28.298,-5.029,7.494)
P: (30.518,-4.167,8.561)
O2: (25.639,-9.385,11.143)
C4': (27.126,-5.959,7.720)
C2': (25.477,-6.821,9.154)
O2': (24.490,-7.178,8.207)
N1: (27.312,-7.997,10.426)
N3: (27.321,-8.995,12.582)
N4: (29.030,-8.604,14.040)
C6: (28.501,-7.384,10.708)
C5: (29.115,-7.546,11.885)
O3': (25.284,-4.537,8.321)
OP1: (30.315,-2.896,7.836)
OP2: (31.117,-4.150,9.913)
C4: (28.479,-8.391,12.841)
O5': (29.114,-4.927,8.655)
C3': (26.176,-5.513,8.816)
C1': (26.652,-7.792,9.094)
O4': (27.585,-7.255,8.170)
C5': (28.298,-5.029,7.494)
P: (30.518,-4.167,8.561)
O2: (25.639,-9.385,11.143)
C4': (27.126,-5.959,7.720)
C2': (25.477,-6.821,9.154)
O2': (24.490,-7.178,8.207)
N1: (27.312,-7.997,10.426)
N3: (27.321,-8.995,12.582)
N4: (29.030,-8.604,14.040)
C6: (28.501,-7.384,10.708)
C5: (29.115,-7.546,11.885)
O3': (25.284,-4.537,8.321)
C2: (23.720,-7.426,14.405)
OP1: (24.198,-2.311,8.398)
OP2: (26.033,-2.941,10.096)
C4: (25.947,-6.749,14.600)
O5': (23.777,-3.965,10.234)
C3': (21.602,-4.559,12.131)
C1': (22.354,-6.758,12.400)
O4': (22.566,-6.383,11.046)
C5': (22.499,-4.331,9.742)
P: (24.864,-3.316,9.260)
O2: (22.737,-8.032,14.844)
C4': (21.782,-5.194,10.760)
C2': (21.318,-5.793,12.967)
O2': (20.016,-6.302,12.766)
N1: (23.642,-6.748,13.177)
N3: (24.890,-7.407,15.090)
N4: (27.076,-6.761,15.312)
C6: (24.733,-6.078,12.692)
C5: (25.893,-6.048,13.359)
O3': (20.522,-3.648,12.161)
OP1: (24.198,-2.311,8.398)
OP2: (26.033,-2.941,10.096)
C4: (25.947,-6.749,14.600)
O5': (23.777,-3.965,10.234)
C3': (21.602,-4.559,12.131)
C1': (22.354,-6.758,12.400)
O4': (22.566,-6.383,11.046)
C5': (22.499,-4.331,9.742)
P: (24.864,-3.316,9.260)
O2: (22.737,-8.032,14.844)
C4': (21.782,-5.194,10.760)
C2': (21.318,-5.793,12.967)
O2': (20.016,-6.302,12.766)
N1: (23.642,-6.748,13.177)
N3: (24.890,-7.407,15.090)
N4: (27.076,-6.761,15.312)
C6: (24.733,-6.078,12.692)
C5: (25.893,-6.048,13.359)
O3': (20.522,-3.648,12.161)
Image (generated by PyMOL):